Guide Gene

Gene ID
Mapoly0029s0109
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003723] RNA binding; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0029s0109 [GO:0003723] RNA binding; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding 0.00 1.0000
1 Mapoly0052s0036 [GO:0005524] ATP binding; [PTHR10593:SF1] SERINE/THREONINE-PROTEIN KINASE RIO2 (RIO KINASE 2); [KOG2268] Serine/threonine protein kinase; [2.7.11.1] Non-specific serine/threonine protein kinase.; [PF01163] RIO1 family; [GO:0006468] protein phosphorylation; [GO:0003824] catalytic activity; [PTHR10593] SERINE/THREONINE-PROTEIN KINASE RIO; [PF09202] Rio2, N-terminal; [K07179] RIO kinase 2 [EC:2.7.11.1]; [GO:0004674] protein serine/threonine kinase activity2.450.9264
2 Mapoly0010s0148 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE2.830.9063
3 Mapoly0107s0037 [GO:0006260] DNA replication; [PF14520] Helix-hairpin-helix domain; [PF01653] NAD-dependent DNA ligase adenylation domain; [PF03119] NAD-dependent DNA ligase C4 zinc finger domain; [PF00533] BRCA1 C Terminus (BRCT) domain; [PF03120] NAD-dependent DNA ligase OB-fold domain; [PF12826] Helix-hairpin-helix motif; [GO:0006281] DNA repair; [PTHR11107] BRCT DOMAIN-CONTAINING PROTEIN; [PTHR11107:SF11] SUBFAMILY NOT NAMED; [GO:0003911] DNA ligase (NAD+) activity2.830.9268
4 Mapoly0133s0003 [GO:0005524] ATP binding; [PTHR24031:SF91] SUBFAMILY NOT NAMED; [KOG0347] RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding3.160.9288
5 Mapoly0004s0135 [PF06421] GTP-binding protein LepA C-terminus; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2; [KOG0462] Elongation factor-type GTP-binding protein4.120.8903
6 Mapoly0082s0085 [GO:0005515] protein binding; [PTHR19848:SF0] SUBFAMILY NOT NAMED; [PTHR19848] WD40 REPEAT PROTEIN; [PF08154] NLE (NUC135) domain; [KOG0271] Notchless-like WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat4.240.9029
7 Mapoly0076s0025 [GO:0005524] ATP binding; [KOG0328] Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF33] ATP-DEPENDENT RNA HELICASE4.470.9232
8 Mapoly0031s0174 [GO:0008168] methyltransferase activity; [GO:0005507] copper ion binding; [PTHR21320] CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED; [GO:0006412] translation; [PF09243] Mitochondrial small ribosomal subunit Rsm225.480.8929
9 Mapoly0026s0116 [PTHR16193] UNCHARACTERIZED; [PF13414] TPR repeat; [KOG1128] Uncharacterized conserved protein, contains TPR repeats7.350.9147
10 Mapoly0039s0104 [GO:0006396] RNA processing; [3.1.26.5] Ribonuclease P.; [GO:0004526] ribonuclease P activity; [PF06978] Ribonucleases P/MRP protein subunit POP1; [K01164] ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]; [GO:0001682] tRNA 5'-leader removal; [PTHR22731] RIBONUCLEASE P/MRP SUBUNIT; [PF08170] POPLD (NUC188) domain7.750.9166
11 Mapoly0117s0021 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family8.770.9145
12 Mapoly0001s0280 [GO:0005524] ATP binding; [KOG0340] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding8.830.8797
13 Mapoly0013s0060 [PTHR19375] HEAT SHOCK PROTEIN 70KDA; [K03283] heat shock 70kDa protein 1/8; [PF00012] Hsp70 protein; [KOG0102] Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily8.940.8967
14 Mapoly0059s0089 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR11472:SF1] DNA REPAIR HELICASE RAD3/XP-D; [KOG1131] RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, 5'-3' helicase subunit RAD3; [PF06777] Protein of unknown function (DUF1227); [GO:0008026] ATP-dependent helicase activity; [K10844] DNA excision repair protein ERCC-2 [EC:3.6.4.12]; [GO:0016787] hydrolase activity; [PF04851] Type III restriction enzyme, res subunit; [PF13307] Helicase C-terminal domain; [3.6.4.12] DNA helicase.; [PF06733] DEAD_2; [GO:0005634] nucleus; [PTHR11472] DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [GO:0004003] ATP-dependent DNA helicase activity; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides9.590.8819
15 Mapoly0120s0020 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PTHR24031:SF97] ATP-DEPENDENT RNA HELICASE (FRAGMENT); [KOG0339] ATP-dependent RNA helicase; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding11.960.8944
16 Mapoly0059s0101 [PTHR16255] UNCHARACTERIZED; [PF02582] Uncharacterised ACR, YagE family COG1723; [KOG2861] Uncharacterized conserved protein12.120.8831
17 Mapoly0022s0105 [PF00867] XPG I-region; [PF00752] XPG N-terminal domain; [GO:0006281] DNA repair; [KOG2519] 5'-3' exonuclease; [GO:0004518] nuclease activity; [PTHR11081] XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY12.370.8572
18 Mapoly0122s0038 [GO:0004176] ATP-dependent peptidase activity; [PTHR23327] RING FINGER PROTEIN 127; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis; [PTHR23327:SF0] SUBFAMILY NOT NAMED12.850.8961
19 Mapoly0116s0020 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K01529] dynamin GTPase [EC:3.6.5.5]; [PTHR24031:SF78] SUBFAMILY NOT NAMED; [3.6.1.-] In phosphorous-containing anhydrides.; [KOG0330] ATP-dependent RNA helicase13.270.8905
20 Mapoly0060s0112 -14.070.8873
21 Mapoly0027s0127 [PTHR22841:SF4] GB DEF: MKIAA1988 PROTEIN (FRAGMENT); [GO:0005515] protein binding; [PTHR22841] FAMILY NOT NAMED; [K14548] U3 small nucleolar RNA-associated protein 4; [KOG0316] Conserved WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat14.280.8960
22 Mapoly0056s0115 [PF00132] Bacterial transferase hexapeptide (six repeats); [PF00483] Nucleotidyl transferase; [KOG1461] Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6); [GO:0005515] protein binding; [GO:0009058] biosynthetic process; [PF02020] eIF4-gamma/eIF5/eIF2-epsilon; [PTHR22572] SUGAR-1-PHOSPHATE GUANYL TRANSFERASE; [K03240] translation initiation factor eIF-2B epsilon subunit; [GO:0016779] nucleotidyltransferase activity; [PTHR22572:SF7] EUKARIOTIC TRANSLATION INITIATION FACTOR 2B, EPSILON SUBUNIT14.460.8870
23 Mapoly0045s0113 [PTHR11089] GTP-BINDING PROTEIN-RELATED; [K14539] large subunit GTPase 1 [EC:3.6.1.-]; [PF01926] 50S ribosome-binding GTPase; [KOG1424] Predicted GTP-binding protein MMR1; [3.6.1.-] In phosphorous-containing anhydrides.; [GO:0005525] GTP binding; [PTHR11089:SF7] GTP-BINDING PROTEIN-RELATED14.490.8218
24 Mapoly0099s0058 -14.700.8814
25 Mapoly0023s0103 [KOG2792] Putative cytochrome C oxidase assembly protein; [PF02630] SCO1/SenC; [PTHR12151] SCO1/SENC; [K07152] dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119]; [PTHR12151:SF5] SENC15.100.8528
26 Mapoly0033s0014 [PF08772] Nin one binding (NOB1) Zn-ribbon like; [PTHR12814] RNA-BINDING PROTEIN NOB1; [K11883] RNA-binding protein NOB115.230.8762
27 Mapoly0212s0005 [PTHR19855] WD40 REPEAT PROTEIN 12, 37; [GO:0005515] protein binding; [KOG0313] Microtubule binding protein YTM1 (contains WD40 repeats); [PF08154] NLE (NUC135) domain; [PF00400] WD domain, G-beta repeat15.430.8942
28 Mapoly0019s0020 [KOG3928] Mitochondrial ribosome small subunit component, mediator of apoptosis DAP3; [PTHR12810] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29; [PTHR12810:SF0] SUBFAMILY NOT NAMED; [PF10236] Mitochondrial ribosomal death-associated protein 316.430.8554
29 Mapoly0128s0017 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase16.940.8678
30 Mapoly0052s0044 [KOG0953] Mitochondrial RNA helicase SUV3, DEAD-box superfamily; [PF12513] Mitochondrial degradasome RNA helicase subunit C terminal; [GO:0016817] hydrolase activity, acting on acid anhydrides; [PTHR12131] ATP-DEPENDENT RNA AND DNA HELICASE; [PF00271] Helicase conserved C-terminal domain; [PTHR12131:SF1] ATP-DEPENDENT DNA HELICASE MGPS17.610.8747
31 Mapoly0177s0018 [PF13374] Tetratricopeptide repeat; [PF13424] Tetratricopeptide repeat; [PTHR19959] KINESIN LIGHT CHAIN17.610.8509
32 Mapoly0012s0146 [PF13414] TPR repeat; [KOG0551] Hsp90 co-chaperone CNS1 (contains TPR repeats); [PTHR22904] TPR REPEAT CONTAINING PROTEIN19.490.8389
33 Mapoly0041s0094 [3.1.26.5] Ribonuclease P.; [PTHR13031] RIBONUCLEASE P-RELATED; [K03539] ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]; [KOG2363] Protein subunit of nuclear ribonuclease P (RNase P); [GO:0008033] tRNA processing; [PF01876] RNase P subunit p30; [GO:0004540] ribonuclease activity19.900.8724
34 Mapoly0001s0165 -20.000.8576
35 Mapoly0067s0022 [PTHR12746] NONSENSE-MEDIATED MRNA DECAY PROTEIN 3; [KOG2613] NMD protein affecting ribosome stability and mRNA decay; [PTHR12746:SF2] gb def: Hypothetical protein; [K07562] nonsense-mediated mRNA decay protein 3; [PF04981] NMD3 family20.490.8836
36 Mapoly0064s0021 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family21.000.8582
37 Mapoly0036s0081 [KOG3225] Mitochondrial import inner membrane translocase, subunit TIM22; [PF02466] Tim17/Tim22/Tim23/Pmp24 family; [PTHR14110] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM2221.660.8478
38 Mapoly0065s0011 [PF01963] TraB family; [PTHR21530] PHEROMONE SHUTDOWN PROTEIN21.910.8520
39 Mapoly0001s0536 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0770] Predicted mitochondrial carrier protein22.980.8743
40 Mapoly0001s0540 [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN; [PF13415] Galactose oxidase, central domain; [KOG1230] Protein containing repeated kelch motifs; [PF13422] Domain of unknown function (DUF4110)23.660.8351
41 Mapoly0064s0032 [GO:0005515] protein binding; [KOG1063] RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily; [PTHR13729] ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN); [K11374] elongator complex protein 2; [PTHR13729:SF2] ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN); [PF00400] WD domain, G-beta repeat24.490.8800
42 Mapoly0024s0139 [PTHR13391] TUBULIN-RELATED PROTEIN; [PF14881] Tubulin domain; [PF10644] Misato Segment II tubulin-like domain; [KOG2530] Members of tubulin/FtsZ family24.660.8711
43 Mapoly0026s0073 [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF00415] Regulator of chromosome condensation (RCC1) repeat24.980.8706
44 Mapoly0004s0068 [KOG3015] F1-ATP synthase assembly protein; [PF07542] ATP12 chaperone protein; [K07556] ATP synthase mitochondrial F1 complex assembly factor 2; [PTHR21013] ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR; [GO:0043461] proton-transporting ATP synthase complex assembly25.100.8286
45 Mapoly0016s0061 [KOG1605] TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation); [PF03031] NLI interacting factor-like phosphatase; [GO:0005744] mitochondrial inner membrane presequence translocase complex; [GO:0005515] protein binding; [GO:0015031] protein transport; [PTHR12210:SF3] TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 50-RELATED; [PTHR12210] NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED; [GO:0005743] mitochondrial inner membrane26.460.8409
46 Mapoly0137s0034 [PF02676] Methyltransferase TYW3; [PTHR23245] UNCHARACTERIZED; [PF13415] Galactose oxidase, central domain; [KOG1227] Putative methyltransferase; [PF02475] Met-10+ like-protein; [GO:0016740] transferase activity26.500.8791
47 Mapoly0058s0072 [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [PF01018] GTP1/OBG; [KOG1489] Predicted GTP-binding protein (ODN superfamily); [GO:0005525] GTP binding; [PTHR11702:SF21] GTP-BINDING PROTEIN28.200.8556
48 Mapoly0066s0060 [GO:0005515] protein binding; [GO:0005730] nucleolus; [KOG0310] Conserved WD40 repeat-containing protein; [PF09384] UTP15 C terminal; [GO:0006364] rRNA processing; [K14549] U3 small nucleolar RNA-associated protein 15; [PTHR19924] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat28.460.8760
49 Mapoly0088s0065 [PF12756] C2H2 type zinc-finger (2 copies); [PF12171] Zinc-finger double-stranded RNA-binding; [KOG0717] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [K09506] DnaJ homolog subfamily A member 529.170.8714
50 Mapoly0165s0019 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [KOG0337] ATP-dependent RNA helicase; [PF08147] DBP10CT (NUC160) domain; [GO:0005634] nucleus; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF71] SUBFAMILY NOT NAMED; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides29.290.8822
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