Guide Gene

Gene ID
Mapoly0059s0101
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR16255] UNCHARACTERIZED; [PF02582] Uncharacterised ACR, YagE family COG1723; [KOG2861] Uncharacterized conserved protein

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0059s0101 [PTHR16255] UNCHARACTERIZED; [PF02582] Uncharacterised ACR, YagE family COG1723; [KOG2861] Uncharacterized conserved protein 0.00 1.0000
1 Mapoly0013s0060 [PTHR19375] HEAT SHOCK PROTEIN 70KDA; [K03283] heat shock 70kDa protein 1/8; [PF00012] Hsp70 protein; [KOG0102] Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily2.000.9100
2 Mapoly0007s0198 [GO:0003677] DNA binding; [GO:0006351] transcription, DNA-dependent; [PTHR10102:SF1] DNA-DIRECTED RNA POLYMERASE; [PTHR10102] DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL; [GO:0003899] DNA-directed RNA polymerase activity; [PF14700] DNA-directed RNA polymerase N-terminal; [2.7.7.6] DNA-directed RNA polymerase.; [PF00940] DNA-dependent RNA polymerase; [K10908] DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]; [KOG1038] Mitochondrial/chloroplast DNA-directed RNA polymerase RPO41, provides primers for DNA replication-initiation2.450.9026
3 Mapoly0002s0338 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding5.480.8848
4 Mapoly0133s0003 [GO:0005524] ATP binding; [PTHR24031:SF91] SUBFAMILY NOT NAMED; [KOG0347] RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding6.480.9038
5 Mapoly0107s0037 [GO:0006260] DNA replication; [PF14520] Helix-hairpin-helix domain; [PF01653] NAD-dependent DNA ligase adenylation domain; [PF03119] NAD-dependent DNA ligase C4 zinc finger domain; [PF00533] BRCA1 C Terminus (BRCT) domain; [PF03120] NAD-dependent DNA ligase OB-fold domain; [PF12826] Helix-hairpin-helix motif; [GO:0006281] DNA repair; [PTHR11107] BRCT DOMAIN-CONTAINING PROTEIN; [PTHR11107:SF11] SUBFAMILY NOT NAMED; [GO:0003911] DNA ligase (NAD+) activity7.480.9015
6 Mapoly0047s0031 [K01952] phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]; [PTHR10099] PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE; [PF02769] AIR synthase related protein, C-terminal domain; [PF13507] CobB/CobQ-like glutamine amidotransferase domain; [PF00586] AIR synthase related protein, N-terminal domain; [KOG1907] Phosphoribosylformylglycinamidine synthase; [GO:0003824] catalytic activity; [PTHR10099:SF1] TEGUMENT PROTEIN; [6.3.5.3] Phosphoribosylformylglycinamidine synthase.8.370.8790
7 Mapoly0029s0109 [GO:0003723] RNA binding; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding12.120.8831
8 Mapoly0120s0020 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PTHR24031:SF97] ATP-DEPENDENT RNA HELICASE (FRAGMENT); [KOG0339] ATP-dependent RNA helicase; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding12.370.8800
9 Mapoly0081s0022 [PF04068] Possible Fer4-like domain in RNase L inhibitor, RLI; [GO:0005524] ATP binding; [PF00037] 4Fe-4S binding domain; [GO:0016887] ATPase activity; [K06174] ATP-binding cassette, sub-family E, member 1; [KOG0063] RNAse L inhibitor, ABC superfamily; [GO:0051536] iron-sulfur cluster binding; [PTHR19248] ATP-BINDING TRANSPORT PROTEIN-RELATED; [PF00005] ABC transporter13.080.8612
10 Mapoly0027s0127 [PTHR22841:SF4] GB DEF: MKIAA1988 PROTEIN (FRAGMENT); [GO:0005515] protein binding; [PTHR22841] FAMILY NOT NAMED; [K14548] U3 small nucleolar RNA-associated protein 4; [KOG0316] Conserved WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat13.640.8842
11 Mapoly0072s0009 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family13.860.8703
12 Mapoly0019s0020 [KOG3928] Mitochondrial ribosome small subunit component, mediator of apoptosis DAP3; [PTHR12810] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29; [PTHR12810:SF0] SUBFAMILY NOT NAMED; [PF10236] Mitochondrial ribosomal death-associated protein 314.000.8465
13 Mapoly0052s0044 [KOG0953] Mitochondrial RNA helicase SUV3, DEAD-box superfamily; [PF12513] Mitochondrial degradasome RNA helicase subunit C terminal; [GO:0016817] hydrolase activity, acting on acid anhydrides; [PTHR12131] ATP-DEPENDENT RNA AND DNA HELICASE; [PF00271] Helicase conserved C-terminal domain; [PTHR12131:SF1] ATP-DEPENDENT DNA HELICASE MGPS14.490.8721
14 Mapoly0066s0060 [GO:0005515] protein binding; [GO:0005730] nucleolus; [KOG0310] Conserved WD40 repeat-containing protein; [PF09384] UTP15 C terminal; [GO:0006364] rRNA processing; [K14549] U3 small nucleolar RNA-associated protein 15; [PTHR19924] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat15.870.8787
15 Mapoly0004s0090 [GO:0003677] DNA binding; [PF06883] RNA polymerase I, Rpa2 specific domain; [KOG0216] RNA polymerase I, second largest subunit; [PF04565] RNA polymerase Rpb2, domain 3; [PTHR20856] DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2; [PF00562] RNA polymerase Rpb2, domain 6; [K03002] DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]; [GO:0032549] ribonucleoside binding; [GO:0005634] nucleus; [PF04561] RNA polymerase Rpb2, domain 2; [GO:0006351] transcription, DNA-dependent; [PTHR20856:SF5] DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2; [GO:0003899] DNA-directed RNA polymerase activity; [2.7.7.6] DNA-directed RNA polymerase.; [PF04560] RNA polymerase Rpb2, domain 7; [PF04563] RNA polymerase beta subunit16.490.8823
16 Mapoly0067s0022 [PTHR12746] NONSENSE-MEDIATED MRNA DECAY PROTEIN 3; [KOG2613] NMD protein affecting ribosome stability and mRNA decay; [PTHR12746:SF2] gb def: Hypothetical protein; [K07562] nonsense-mediated mRNA decay protein 3; [PF04981] NMD3 family16.910.8789
17 Mapoly0035s0103 [PF03109] ABC1 family; [KOG1236] Predicted unusual protein kinase; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [PTHR10566:SF6] BETA-LACTAMASE-RELATED; [K08869] aarF domain-containing kinase18.170.8098
18 Mapoly0089s0054 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family18.710.8487
19 Mapoly0019s0041 [PTHR31038] FAMILY NOT NAMED; [PF11891] Domain of unknown function (DUF3411)21.070.8382
20 Mapoly0116s0020 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K01529] dynamin GTPase [EC:3.6.5.5]; [PTHR24031:SF78] SUBFAMILY NOT NAMED; [3.6.1.-] In phosphorous-containing anhydrides.; [KOG0330] ATP-dependent RNA helicase21.560.8708
21 Mapoly0045s0113 [PTHR11089] GTP-BINDING PROTEIN-RELATED; [K14539] large subunit GTPase 1 [EC:3.6.1.-]; [PF01926] 50S ribosome-binding GTPase; [KOG1424] Predicted GTP-binding protein MMR1; [3.6.1.-] In phosphorous-containing anhydrides.; [GO:0005525] GTP binding; [PTHR11089:SF7] GTP-BINDING PROTEIN-RELATED22.800.8105
22 Mapoly0084s0039 [GO:0005524] ATP binding; [K07178] RIO kinase 1 [EC:2.7.11.1]; [2.7.11.1] Non-specific serine/threonine protein kinase.; [PF01163] RIO1 family; [GO:0003824] catalytic activity; [PTHR10593] SERINE/THREONINE-PROTEIN KINASE RIO; [KOG2270] Serine/threonine protein kinase involved in cell cycle control22.800.8754
23 Mapoly0001s0055 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family24.660.8424
24 Mapoly0056s0115 [PF00132] Bacterial transferase hexapeptide (six repeats); [PF00483] Nucleotidyl transferase; [KOG1461] Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6); [GO:0005515] protein binding; [GO:0009058] biosynthetic process; [PF02020] eIF4-gamma/eIF5/eIF2-epsilon; [PTHR22572] SUGAR-1-PHOSPHATE GUANYL TRANSFERASE; [K03240] translation initiation factor eIF-2B epsilon subunit; [GO:0016779] nucleotidyltransferase activity; [PTHR22572:SF7] EUKARIOTIC TRANSLATION INITIATION FACTOR 2B, EPSILON SUBUNIT24.740.8630
25 Mapoly0088s0019 [PTHR21392:SF2] gb def: Hypothetical protein At2g41750 (At2g41750/T11A7.15); [PTHR21392] UNCHARACTERIZED; [PF03942] DTW domain24.860.7849
26 Mapoly0016s0061 [KOG1605] TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation); [PF03031] NLI interacting factor-like phosphatase; [GO:0005744] mitochondrial inner membrane presequence translocase complex; [GO:0005515] protein binding; [GO:0015031] protein transport; [PTHR12210:SF3] TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 50-RELATED; [PTHR12210] NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED; [GO:0005743] mitochondrial inner membrane25.100.8303
27 Mapoly0116s0031 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family; [PF07721] Tetratricopeptide repeat; [GO:0042802] identical protein binding28.840.8483
28 Mapoly0052s0036 [GO:0005524] ATP binding; [PTHR10593:SF1] SERINE/THREONINE-PROTEIN KINASE RIO2 (RIO KINASE 2); [KOG2268] Serine/threonine protein kinase; [2.7.11.1] Non-specific serine/threonine protein kinase.; [PF01163] RIO1 family; [GO:0006468] protein phosphorylation; [GO:0003824] catalytic activity; [PTHR10593] SERINE/THREONINE-PROTEIN KINASE RIO; [PF09202] Rio2, N-terminal; [K07179] RIO kinase 2 [EC:2.7.11.1]; [GO:0004674] protein serine/threonine kinase activity28.980.8590
29 Mapoly0029s0132 [K02355] elongation factor EF-G [EC:3.6.5.3]; [PF14492] Elongation Factor G, domain II; [3.6.5.3] Protein-synthesizing GTPase.; [PF00009] Elongation factor Tu GTP binding domain; [KOG0465] Mitochondrial elongation factor; [PF00679] Elongation factor G C-terminus; [GO:0003924] GTPase activity; [PTHR23115:SF66] SUBFAMILY NOT NAMED; [PTHR23115] TRANSLATION FACTOR; [PF03764] Elongation factor G, domain IV; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 230.080.7514
30 Mapoly0165s0019 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [KOG0337] ATP-dependent RNA helicase; [PF08147] DBP10CT (NUC160) domain; [GO:0005634] nucleus; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF71] SUBFAMILY NOT NAMED; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides31.130.8684
31 Mapoly0043s0008 [PTHR13457:SF1] gb def: part of small (ribosomal) subunit (ssu) processosome (contains u3 snorna), utp10; [PF12397] U3 small nucleolar RNA-associated protein 10; [PTHR13457] BAP28; [PF08146] BP28CT (NUC211) domain; [K14550] U3 small nucleolar RNA-associated protein 1031.300.8389
32 Mapoly0045s0031 [K01870] isoleucyl-tRNA synthetase [EC:6.1.1.5]; [GO:0005524] ATP binding; [6.1.1.5] Isoleucine--tRNA ligase.; [KOG0434] Isoleucyl-tRNA synthetase; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PTHR11946:SF11] SUBFAMILY NOT NAMED; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity31.460.8549
33 Mapoly0015s0193 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family32.560.8270
34 Mapoly0004s0137 [PTHR10774] EXTENDED SYNAPTOTAGMIN-RELATED; [PF00168] C2 domain; [GO:0005515] protein binding32.590.7524
35 Mapoly0002s0303 [GO:0005524] ATP binding; [PTHR10046:SF23] LON PROTEASE HOMOLOG, MITOCHONDRIAL; [3.4.21.-] Serine endopeptidases.; [K08675] Lon-like ATP-dependent protease [EC:3.4.21.-]; [PF05362] Lon protease (S16) C-terminal proteolytic domain; [GO:0004176] ATP-dependent peptidase activity; [KOG2004] Mitochondrial ATP-dependent protease PIM1/LON; [GO:0004252] serine-type endopeptidase activity; [PF00004] ATPase family associated with various cellular activities (AAA); [PF02190] ATP-dependent protease La (LON) domain; [GO:0030163] protein catabolic process; [PTHR10046] ATP DEPENDENT LON PROTEASE FAMILY MEMBER; [GO:0006508] proteolysis33.050.7614
36 Mapoly0001s0536 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0770] Predicted mitochondrial carrier protein34.640.8454
37 Mapoly0212s0005 [PTHR19855] WD40 REPEAT PROTEIN 12, 37; [GO:0005515] protein binding; [KOG0313] Microtubule binding protein YTM1 (contains WD40 repeats); [PF08154] NLE (NUC135) domain; [PF00400] WD domain, G-beta repeat34.640.8591
38 Mapoly0041s0109 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family34.910.8545
39 Mapoly0082s0085 [GO:0005515] protein binding; [PTHR19848:SF0] SUBFAMILY NOT NAMED; [PTHR19848] WD40 REPEAT PROTEIN; [PF08154] NLE (NUC135) domain; [KOG0271] Notchless-like WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat36.000.8387
40 Mapoly0033s0014 [PF08772] Nin one binding (NOB1) Zn-ribbon like; [PTHR12814] RNA-BINDING PROTEIN NOB1; [K11883] RNA-binding protein NOB136.990.8373
41 Mapoly0026s0116 [PTHR16193] UNCHARACTERIZED; [PF13414] TPR repeat; [KOG1128] Uncharacterized conserved protein, contains TPR repeats37.630.8490
42 Mapoly0028s0021 -38.340.8279
43 Mapoly0020s0093 [PF12589] Methyltransferase involved in Williams-Beuren syndrome; [PTHR12734:SF0] SUBFAMILY NOT NAMED; [GO:0008168] methyltransferase activity; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process; [KOG1541] Predicted protein carboxyl methylase; [PTHR12734] METHYLTRANSFERASE-RELATED39.600.8170
44 Mapoly0001s0533 [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED39.970.8408
45 Mapoly0023s0103 [KOG2792] Putative cytochrome C oxidase assembly protein; [PF02630] SCO1/SenC; [PTHR12151] SCO1/SENC; [K07152] dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119]; [PTHR12151:SF5] SENC40.120.8061
46 Mapoly0137s0034 [PF02676] Methyltransferase TYW3; [PTHR23245] UNCHARACTERIZED; [PF13415] Galactose oxidase, central domain; [KOG1227] Putative methyltransferase; [PF02475] Met-10+ like-protein; [GO:0016740] transferase activity41.710.8454
47 Mapoly0031s0174 [GO:0008168] methyltransferase activity; [GO:0005507] copper ion binding; [PTHR21320] CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED; [GO:0006412] translation; [PF09243] Mitochondrial small ribosomal subunit Rsm2242.430.8279
48 Mapoly0006s0259 [PTHR10527:SF5] IMPORTIN-5 (IMPORTIN SUBUNIT BETA-3); [KOG2171] Karyopherin (importin) beta 3; [GO:0005515] protein binding; [PF02985] HEAT repeat; [PTHR10527] IMPORTIN BETA; [PF13646] HEAT repeats42.780.8139
49 Mapoly0122s0038 [GO:0004176] ATP-dependent peptidase activity; [PTHR23327] RING FINGER PROTEIN 127; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis; [PTHR23327:SF0] SUBFAMILY NOT NAMED43.470.8478
50 Mapoly0095s0055 [PF14492] Elongation Factor G, domain II; [3.6.5.-] Acting on GTP; involved in cellular and subcellular movement.; [PTHR23115:SF3] TRANSLATION ELONGATION FACTOR; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [K14536] ribosome assembly protein 1 [EC:3.6.5.-]; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [KOG0467] Translation elongation factor 2/ribosome biogenesis protein RIA1 and related proteins; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 244.360.8284
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