Guide Gene
- Gene ID
- Mapoly0002s0338
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding
Coexpressed Gene List
Search : Show :Showing 1 to 50 of 200 records
Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0002s0338 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 0.00 1.0000 1 Mapoly0007s0098 [GO:0005524] ATP binding; [KOG0742] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23075] PUTATIVE ATP-ASE; [PF12037] Domain of unknown function (DUF3523) 2.83 0.8887 2 Mapoly0081s0022 [PF04068] Possible Fer4-like domain in RNase L inhibitor, RLI; [GO:0005524] ATP binding; [PF00037] 4Fe-4S binding domain; [GO:0016887] ATPase activity; [K06174] ATP-binding cassette, sub-family E, member 1; [KOG0063] RNAse L inhibitor, ABC superfamily; [GO:0051536] iron-sulfur cluster binding; [PTHR19248] ATP-BINDING TRANSPORT PROTEIN-RELATED; [PF00005] ABC transporter 3.16 0.8951 3 Mapoly0027s0127 [PTHR22841:SF4] GB DEF: MKIAA1988 PROTEIN (FRAGMENT); [GO:0005515] protein binding; [PTHR22841] FAMILY NOT NAMED; [K14548] U3 small nucleolar RNA-associated protein 4; [KOG0316] Conserved WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat 4.00 0.8968 4 Mapoly0013s0060 [PTHR19375] HEAT SHOCK PROTEIN 70KDA; [K03283] heat shock 70kDa protein 1/8; [PF00012] Hsp70 protein; [KOG0102] Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily 5.48 0.8948 5 Mapoly0059s0101 [PTHR16255] UNCHARACTERIZED; [PF02582] Uncharacterised ACR, YagE family COG1723; [KOG2861] Uncharacterized conserved protein 5.48 0.8848 6 Mapoly0093s0033 [PTHR22939] SERINE PROTEASE FAMILY S1C HTRA-RELATED; [GO:0005515] protein binding; [PF13180] PDZ domain; [KOG1320] Serine protease; [PTHR22939:SF1] SERINE ENDOPEPTIDASE DEGP2; [PF13365] Trypsin-like peptidase domain 7.42 0.8882 7 Mapoly0047s0031 [K01952] phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]; [PTHR10099] PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE; [PF02769] AIR synthase related protein, C-terminal domain; [PF13507] CobB/CobQ-like glutamine amidotransferase domain; [PF00586] AIR synthase related protein, N-terminal domain; [KOG1907] Phosphoribosylformylglycinamidine synthase; [GO:0003824] catalytic activity; [PTHR10099:SF1] TEGUMENT PROTEIN; [6.3.5.3] Phosphoribosylformylglycinamidine synthase. 10.49 0.8742 8 Mapoly0029s0132 [K02355] elongation factor EF-G [EC:3.6.5.3]; [PF14492] Elongation Factor G, domain II; [3.6.5.3] Protein-synthesizing GTPase.; [PF00009] Elongation factor Tu GTP binding domain; [KOG0465] Mitochondrial elongation factor; [PF00679] Elongation factor G C-terminus; [GO:0003924] GTPase activity; [PTHR23115:SF66] SUBFAMILY NOT NAMED; [PTHR23115] TRANSLATION FACTOR; [PF03764] Elongation factor G, domain IV; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2 10.54 0.7727 9 Mapoly0004s0145 [PTHR24012] FAMILY NOT NAMED; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) 10.82 0.8761 10 Mapoly0020s0016 [PTHR13102:SF0] SUBFAMILY NOT NAMED; [PTHR13102] PROTEIN C14ORF21; [KOG2188] Predicted RNA-binding protein, contains Pumilio domains 12.33 0.8775 11 Mapoly0072s0009 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 12.49 0.8691 12 Mapoly0020s0093 [PF12589] Methyltransferase involved in Williams-Beuren syndrome; [PTHR12734:SF0] SUBFAMILY NOT NAMED; [GO:0008168] methyltransferase activity; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process; [KOG1541] Predicted protein carboxyl methylase; [PTHR12734] METHYLTRANSFERASE-RELATED 13.19 0.8401 13 Mapoly0036s0031 [GO:0003723] RNA binding; [K02945] small subunit ribosomal protein S1; [PF00575] S1 RNA binding domain; [PTHR15838] FAMILY NOT NAMED 14.66 0.8283 14 Mapoly0015s0117 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0764] Mitochondrial FAD carrier protein; [PTHR24089:SF62] SUBFAMILY NOT NAMED 15.00 0.8434 15 Mapoly0102s0020 [GO:0005524] ATP binding; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [KOG0062] ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b; [K06158] ATP-binding cassette, sub-family F, member 3; [PF12848] ABC transporter; [PF00005] ABC transporter 15.20 0.8386 16 Mapoly0165s0019 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [KOG0337] ATP-dependent RNA helicase; [PF08147] DBP10CT (NUC160) domain; [GO:0005634] nucleus; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF71] SUBFAMILY NOT NAMED; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 15.87 0.8841 17 Mapoly0007s0198 [GO:0003677] DNA binding; [GO:0006351] transcription, DNA-dependent; [PTHR10102:SF1] DNA-DIRECTED RNA POLYMERASE; [PTHR10102] DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL; [GO:0003899] DNA-directed RNA polymerase activity; [PF14700] DNA-directed RNA polymerase N-terminal; [2.7.7.6] DNA-directed RNA polymerase.; [PF00940] DNA-dependent RNA polymerase; [K10908] DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]; [KOG1038] Mitochondrial/chloroplast DNA-directed RNA polymerase RPO41, provides primers for DNA replication-initiation 19.08 0.8579 18 Mapoly0084s0039 [GO:0005524] ATP binding; [K07178] RIO kinase 1 [EC:2.7.11.1]; [2.7.11.1] Non-specific serine/threonine protein kinase.; [PF01163] RIO1 family; [GO:0003824] catalytic activity; [PTHR10593] SERINE/THREONINE-PROTEIN KINASE RIO; [KOG2270] Serine/threonine protein kinase involved in cell cycle control 19.75 0.8758 19 Mapoly0119s0018 [PTHR12858] RIBOSOME BIOGENESIS PROTEIN; [PTHR12858:SF1] RIBOSOME BIOGENESIS PROTEIN TSR1 (20S RRNA ACCUMULATION PROTEIN 1); [GO:0042254] ribosome biogenesis; [GO:0005634] nucleus; [PF08142] AARP2CN (NUC121) domain; [KOG1980] Uncharacterized conserved protein; [PF04950] Protein of unknown function (DUF663) 22.23 0.8686 20 Mapoly0033s0014 [PF08772] Nin one binding (NOB1) Zn-ribbon like; [PTHR12814] RNA-BINDING PROTEIN NOB1; [K11883] RNA-binding protein NOB1 22.36 0.8531 21 Mapoly0065s0028 [GO:0005840] ribosome; [PF00312] Ribosomal protein S15; [PTHR23321] RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation 22.80 0.8310 22 Mapoly0129s0030 [GO:0005524] ATP binding; [K07760] cyclin-dependent kinase [EC:2.7.11.22]; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24056:SF92] CELL DIVISION PROTEIN KINASE 8; [GO:0006468] protein phosphorylation; [KOG0666] Cyclin C-dependent kinase CDK8; [2.7.11.22] Cyclin-dependent kinase.; [PTHR24056] CELL DIVISION PROTEIN KINASE 24.08 0.7038 23 Mapoly0023s0075 [GO:0006355] regulation of transcription, DNA-dependent; [PF00847] AP2 domain; [PTHR31190] FAMILY NOT NAMED; [GO:0003700] sequence-specific DNA binding transcription factor activity 24.19 0.8033 24 Mapoly0019s0041 [PTHR31038] FAMILY NOT NAMED; [PF11891] Domain of unknown function (DUF3411) 24.80 0.8309 25 Mapoly0028s0021 - 24.92 0.8422 26 Mapoly0008s0193 [PTHR24031:SF54] SUBFAMILY NOT NAMED; [GO:0005524] ATP binding; [KOG0343] RNA Helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF13959] Domain of unknown function (DUF4217) 25.40 0.8577 27 Mapoly0187s0001 [GO:0005840] ribosome; [PTHR21569:SF1] RIBOSOMAL PROTEIN S9; [KOG1753] 40S ribosomal protein S16; [K02996] small subunit ribosomal protein S9; [GO:0003735] structural constituent of ribosome; [PF00380] Ribosomal protein S9/S16; [PTHR21569] RIBOSOMAL PROTEIN S9; [GO:0006412] translation 26.06 0.7831 28 Mapoly0144s0025 [GO:0005524] ATP binding; [K04077] chaperonin GroEL; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0356] Mitochondrial chaperonin, Cpn60/Hsp60p 27.35 0.8254 29 Mapoly0125s0016 [GO:0005737] cytoplasm; [GO:0009058] biosynthetic process; [K01892] histidyl-tRNA synthetase [EC:6.1.1.21]; [GO:0016841] ammonia-lyase activity; [PF00221] Aromatic amino acid lyase; [PTHR11476:SF1] HISTIDYL-TRNA SYNTHETASE; [PF03129] Anticodon binding domain; [PTHR11476] HISTIDYL-TRNA SYNTHETASE; [PF13393] Histidyl-tRNA synthetase; [KOG1936] Histidyl-tRNA synthetase; [6.1.1.21] Histidine--tRNA ligase. 27.82 0.8565 30 Mapoly0067s0022 [PTHR12746] NONSENSE-MEDIATED MRNA DECAY PROTEIN 3; [KOG2613] NMD protein affecting ribosome stability and mRNA decay; [PTHR12746:SF2] gb def: Hypothetical protein; [K07562] nonsense-mediated mRNA decay protein 3; [PF04981] NMD3 family 29.44 0.8566 31 Mapoly0001s0055 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 30.00 0.8364 32 Mapoly0031s0152 [PF01545] Cation efflux family; [KOG1484] Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily); [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0006812] cation transport; [GO:0008324] cation transmembrane transporter activity; [PTHR11562] CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 30.59 0.8317 33 Mapoly0027s0074 [PTHR23111] ZINC FINGER PROTEIN; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others; [KOG4198] RNA-binding Ran Zn-finger protein and related proteins 32.19 0.8419 34 Mapoly0004s0090 [GO:0003677] DNA binding; [PF06883] RNA polymerase I, Rpa2 specific domain; [KOG0216] RNA polymerase I, second largest subunit; [PF04565] RNA polymerase Rpb2, domain 3; [PTHR20856] DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2; [PF00562] RNA polymerase Rpb2, domain 6; [K03002] DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]; [GO:0032549] ribonucleoside binding; [GO:0005634] nucleus; [PF04561] RNA polymerase Rpb2, domain 2; [GO:0006351] transcription, DNA-dependent; [PTHR20856:SF5] DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2; [GO:0003899] DNA-directed RNA polymerase activity; [2.7.7.6] DNA-directed RNA polymerase.; [PF04560] RNA polymerase Rpb2, domain 7; [PF04563] RNA polymerase beta subunit 32.25 0.8568 35 Mapoly0004s0060 [3.1.2.15] Ubiquitin thiolesterase.; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0006511] ubiquitin-dependent protein catabolic process; [K11855] ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.1.2.15]; [KOG1865] Ubiquitin carboxyl-terminal hydrolase; [PTHR24006] FAMILY NOT NAMED 32.62 0.8096 36 Mapoly0003s0246 [GO:0006396] RNA processing; [PF03725] 3' exoribonuclease family, domain 2; [GO:0003723] RNA binding; [K00962] polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]; [PTHR11252:SF0] SUBFAMILY NOT NAMED; [KOG1067] Predicted RNA-binding polyribonucleotide nucleotidyltransferase; [GO:0000175] 3'-5'-exoribonuclease activity; [PF00575] S1 RNA binding domain; [2.7.7.8] Polyribonucleotide nucleotidyltransferase.; [GO:0004654] polyribonucleotide nucleotidyltransferase activity; [PF00013] KH domain; [GO:0006402] mRNA catabolic process; [PF01138] 3' exoribonuclease family, domain 1; [PTHR11252] POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE; [PF03726] Polyribonucleotide nucleotidyltransferase, RNA binding domain 32.73 0.8523 37 Mapoly0002s0303 [GO:0005524] ATP binding; [PTHR10046:SF23] LON PROTEASE HOMOLOG, MITOCHONDRIAL; [3.4.21.-] Serine endopeptidases.; [K08675] Lon-like ATP-dependent protease [EC:3.4.21.-]; [PF05362] Lon protease (S16) C-terminal proteolytic domain; [GO:0004176] ATP-dependent peptidase activity; [KOG2004] Mitochondrial ATP-dependent protease PIM1/LON; [GO:0004252] serine-type endopeptidase activity; [PF00004] ATPase family associated with various cellular activities (AAA); [PF02190] ATP-dependent protease La (LON) domain; [GO:0030163] protein catabolic process; [PTHR10046] ATP DEPENDENT LON PROTEASE FAMILY MEMBER; [GO:0006508] proteolysis 33.47 0.7602 38 Mapoly0156s0021 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG1963] WD40 repeat protein; [PF00400] WD domain, G-beta repeat 35.41 0.8560 39 Mapoly0003s0297 [GO:0005524] ATP binding; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [KOG0342] ATP-dependent RNA helicase pitchoune; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K13179] ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]; [PF13959] Domain of unknown function (DUF4217) 36.22 0.8395 40 Mapoly0056s0115 [PF00132] Bacterial transferase hexapeptide (six repeats); [PF00483] Nucleotidyl transferase; [KOG1461] Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6); [GO:0005515] protein binding; [GO:0009058] biosynthetic process; [PF02020] eIF4-gamma/eIF5/eIF2-epsilon; [PTHR22572] SUGAR-1-PHOSPHATE GUANYL TRANSFERASE; [K03240] translation initiation factor eIF-2B epsilon subunit; [GO:0016779] nucleotidyltransferase activity; [PTHR22572:SF7] EUKARIOTIC TRANSLATION INITIATION FACTOR 2B, EPSILON SUBUNIT 36.33 0.8462 41 Mapoly0052s0044 [KOG0953] Mitochondrial RNA helicase SUV3, DEAD-box superfamily; [PF12513] Mitochondrial degradasome RNA helicase subunit C terminal; [GO:0016817] hydrolase activity, acting on acid anhydrides; [PTHR12131] ATP-DEPENDENT RNA AND DNA HELICASE; [PF00271] Helicase conserved C-terminal domain; [PTHR12131:SF1] ATP-DEPENDENT DNA HELICASE MGPS 37.35 0.8400 42 Mapoly0001s0447 [KOG0925] mRNA splicing factor ATP-dependent RNA helicase; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [K12820] pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold 37.79 0.8139 43 Mapoly0112s0035 [PF04117] Mpv17 / PMP22 family; [PTHR11266:SF5] 22 KDA PEROXISOMAL MEMBRANE PROTEIN; [GO:0016021] integral to membrane; [PTHR11266] PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 (MPV17) 38.61 0.7274 44 Mapoly0045s0031 [K01870] isoleucyl-tRNA synthetase [EC:6.1.1.5]; [GO:0005524] ATP binding; [6.1.1.5] Isoleucine--tRNA ligase.; [KOG0434] Isoleucyl-tRNA synthetase; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PTHR11946:SF11] SUBFAMILY NOT NAMED; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity 38.83 0.8426 45 Mapoly0005s0193 [PF00206] Lyase; [PF14698] Argininosuccinate lyase C-terminal; [4.3.2.1] Argininosuccinate lyase.; [KOG1316] Argininosuccinate lyase; [GO:0004056] argininosuccinate lyase activity; [PTHR11444:SF3] ARGININOSUCCINATE LYASE; [PTHR11444] ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE; [GO:0042450] arginine biosynthetic process via ornithine; [K01755] argininosuccinate lyase [EC:4.3.2.1] 39.37 0.8155 46 Mapoly0035s0103 [PF03109] ABC1 family; [KOG1236] Predicted unusual protein kinase; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [PTHR10566:SF6] BETA-LACTAMASE-RELATED; [K08869] aarF domain-containing kinase 40.60 0.7784 47 Mapoly0162s0006 [PF02784] Pyridoxal-dependent decarboxylase, pyridoxal binding domain; [PF00278] Pyridoxal-dependent decarboxylase, C-terminal sheet domain; [K01583] arginine decarboxylase [EC:4.1.1.19]; [PTHR11482] ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE; [GO:0003824] catalytic activity; [4.1.1.19] Arginine decarboxylase. 41.53 0.6849 48 Mapoly0212s0005 [PTHR19855] WD40 REPEAT PROTEIN 12, 37; [GO:0005515] protein binding; [KOG0313] Microtubule binding protein YTM1 (contains WD40 repeats); [PF08154] NLE (NUC135) domain; [PF00400] WD domain, G-beta repeat 41.81 0.8480 49 Mapoly0043s0004 - 42.65 0.7757 50 Mapoly0019s0020 [KOG3928] Mitochondrial ribosome small subunit component, mediator of apoptosis DAP3; [PTHR12810] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29; [PTHR12810:SF0] SUBFAMILY NOT NAMED; [PF10236] Mitochondrial ribosomal death-associated protein 3 42.85 0.7975