Guide Gene
- Gene ID
- Mapoly0097s0077
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PTHR12888:SF0] SUBFAMILY NOT NAMED; [K13345] peroxin-12; [GO:0008270] zinc ion binding; [GO:0006625] protein targeting to peroxisome; [PF04757] Pex2 / Pex12 amino terminal region; [PF13923] Zinc finger, C3HC4 type (RING finger); [PTHR12888] PEROXISOME ASSEMBLY PROTEIN 12 (PEROXIN-12); [GO:0005779] integral to peroxisomal membrane; [GO:0008022] protein C-terminus binding; [KOG0826] Predicted E3 ubiquitin ligase involved in peroxisome organization
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0097s0077 [PTHR12888:SF0] SUBFAMILY NOT NAMED; [K13345] peroxin-12; [GO:0008270] zinc ion binding; [GO:0006625] protein targeting to peroxisome; [PF04757] Pex2 / Pex12 amino terminal region; [PF13923] Zinc finger, C3HC4 type (RING finger); [PTHR12888] PEROXISOME ASSEMBLY PROTEIN 12 (PEROXIN-12); [GO:0005779] integral to peroxisomal membrane; [GO:0008022] protein C-terminus binding; [KOG0826] Predicted E3 ubiquitin ligase involved in peroxisome organization 0.00 1.0000 1 Mapoly0011s0200 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02836] peptide chain release factor RF-2; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PTHR11075:SF6] PEPTIDE CHAIN RELEASE FACTOR 2; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity 1.00 0.9220 2 Mapoly0010s0199 [GO:0005737] cytoplasm; [PTHR11933] TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE; [PF03054] tRNA methyl transferase; [GO:0008033] tRNA processing; [GO:0016740] transferase activity; [2.8.1.-] Sulfurtransferases.; [K00566] tRNA-specific 2-thiouridylase [EC:2.8.1.-]; [KOG2805] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2.00 0.8966 3 Mapoly0047s0046 [KOG2740] Clathrin-associated protein medium chain; [GO:0016192] vesicle-mediated transport; [K12398] AP-3 complex subunit mu; [GO:0005515] protein binding; [PTHR11998] CLATHRIN COAT ASSEMBLY PROTEIN; [PF00928] Adaptor complexes medium subunit family; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [PTHR11998:SF4] CLATHRIN COAT ADAPTOR AP3 MEDIUM CHAIN 2.45 0.9110 4 Mapoly0007s0115 [KOG0959] N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily; [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16) 3.46 0.9079 5 Mapoly0001s0178 [PF00782] Dual specificity phosphatase, catalytic domain; [K05766] slingshot; [GO:0006470] protein dephosphorylation; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity 5.48 0.8651 6 Mapoly0083s0005 [PF05773] RWD domain; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00035] Double-stranded RNA binding motif; [GO:0005515] protein binding; [KOG0920] ATP-dependent RNA helicase A; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold 7.07 0.8869 7 Mapoly0071s0110 [GO:0042393] histone binding; [PF02182] SAD/SRA domain; [PTHR14140] E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 8.49 0.8832 8 Mapoly0020s0117 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG1947] Leucine rich repeat proteins, some proteins contain F-box 9.49 0.8759 9 Mapoly0016s0169 - 9.54 0.8667 10 Mapoly0023s0020 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [PF01255] Putative undecaprenyl diphosphate synthase; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR10291] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE; [K11778] cis-prenyltransferase, dehydrodolichyl diphosphate synthase [EC:2.5.1.-]; [PTHR10291:SF0] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE 9.80 0.8642 11 Mapoly0003s0075 [PTHR13069] UNCHARACTERIZED; [PF13532] 2OG-Fe(II) oxygenase superfamily 9.95 0.8731 12 Mapoly0019s0108 [PF02033] Ribosome-binding factor A; [GO:0006364] rRNA processing 10.39 0.8760 13 Mapoly0007s0129 [GO:0005515] protein binding; [PF00646] F-box domain 10.58 0.8855 14 Mapoly0058s0055 [PF06244] Protein of unknown function (DUF1014); [PTHR21680:SF0] SUBFAMILY NOT NAMED; [KOG3223] Uncharacterized conserved protein; [PTHR21680] UNCHARACTERIZED 10.77 0.8455 15 Mapoly0025s0100 [PTHR13124] 39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED; [KOG4548] Mitochondrial ribosomal protein L17; [PF11788] 39S mitochondrial ribosomal protein L46 11.49 0.8712 16 Mapoly0164s0014 [KOG0341] DEAD-box protein abstrakt; [GO:0005524] ATP binding; [K13116] ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF20] SUBFAMILY NOT NAMED 11.75 0.8856 17 Mapoly0029s0153 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [GO:0004659] prenyltransferase activity; [K02257] protoheme IX farnesyltransferase [EC:2.5.1.-]; [PTHR11048:SF3] PROTOHEME IX FARNESYLTRANSFERASE; [GO:0016021] integral to membrane; [PTHR11048] PRENYLTRANSFERASES; [PF01040] UbiA prenyltransferase family 12.65 0.8601 18 Mapoly0319s0001 [PF03094] Mlo family; [GO:0016021] integral to membrane; [GO:0006952] defense response 13.86 0.8200 19 Mapoly0006s0096 [PTHR16201] FAMILY NOT NAMED; [PF04193] PQ loop repeat 14.07 0.8594 20 Mapoly0156s0017 [PF07719] Tetratricopeptide repeat 14.70 0.8539 21 Mapoly0012s0148 - 16.09 0.8342 22 Mapoly0002s0048 [KOG2374] Uncharacterized conserved protein; [PF09740] Uncharacterized conserved protein (DUF2043) 16.73 0.8661 23 Mapoly0187s0013 [K08488] syntaxin 7; [PTHR19957:SF38] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [PTHR19957] SYNTAXIN; [PF14523] Syntaxin-like protein; [KOG0811] SNARE protein PEP12/VAM3/Syntaxin 7/Syntaxin 17; [PF05739] SNARE domain 17.55 0.8484 24 Mapoly0078s0062 [PF13516] Leucine Rich repeat; [PTHR24106] FAMILY NOT NAMED; [KOG1909] Ran GTPase-activating protein 17.72 0.7350 25 Mapoly0013s0098 [K05982] deoxyribonuclease V [EC:3.1.21.7]; [KOG4417] Predicted endonuclease; [3.1.21.7] Deoxyribonuclease V.; [PF04493] Endonuclease V; [GO:0006281] DNA repair; [GO:0004519] endonuclease activity 18.97 0.7962 26 Mapoly0073s0083 [PF03024] Folate receptor family 19.29 0.8202 27 Mapoly0031s0113 [PTHR20854] INOSITOL MONOPHOSPHATASE; [GO:0046854] phosphatidylinositol phosphorylation; [3.1.3.7] 3'(2'),5'-bisphosphate nucleotidase.; [KOG1528] Salt-sensitive 3'-phosphoadenosine-5'-phosphatase HAL2/SAL1; [PF00459] Inositol monophosphatase family; [K01082] 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] 20.20 0.8252 28 Mapoly0001s0536 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0770] Predicted mitochondrial carrier protein 20.35 0.8627 29 Mapoly0064s0103 [PTHR15189] FAMILY NOT NAMED; [K12173] BRCA1-A complex subunit BRE; [PF06113] Brain and reproductive organ-expressed protein (BRE) 20.66 0.8220 30 Mapoly0031s0152 [PF01545] Cation efflux family; [KOG1484] Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily); [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0006812] cation transport; [GO:0008324] cation transmembrane transporter activity; [PTHR11562] CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 20.78 0.8485 31 Mapoly0026s0073 [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF00415] Regulator of chromosome condensation (RCC1) repeat 20.90 0.8602 32 Mapoly0118s0043 - 21.17 0.8233 33 Mapoly0001s0546 [PF15264] Tumour suppressing sub-chromosomal transferable candidate 4 21.82 0.8641 34 Mapoly0163s0003 [PTHR32133] FAMILY NOT NAMED 22.58 0.8018 35 Mapoly0118s0030 [PF01490] Transmembrane amino acid transporter protein; [KOG1305] Amino acid transporter protein; [PTHR22950] AMINO ACID TRANSPORTER 22.98 0.8433 36 Mapoly0085s0075 [PTHR31317] FAMILY NOT NAMED; [PF06219] Protein of unknown function (DUF1005) 23.98 0.8573 37 Mapoly0128s0010 [PTHR12749:SF0] SUBFAMILY NOT NAMED; [PTHR12749] EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1; [PF14520] Helix-hairpin-helix domain; [PF03834] Binding domain of DNA repair protein Ercc1 (rad10/Swi10); [GO:0005634] nucleus; [GO:0006281] DNA repair; [GO:0003684] damaged DNA binding; [K10849] DNA excision repair protein ERCC-1; [KOG2841] Structure-specific endonuclease ERCC1-XPF, ERCC1 component; [GO:0004519] endonuclease activity 24.00 0.8439 38 Mapoly0074s0013 [GO:0018344] protein geranylgeranylation; [K05956] geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]; [KOG0366] Protein geranylgeranyltransferase type II, beta subunit; [PF13249] Prenyltransferase-like; [PTHR11774] GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat; [2.5.1.60] Protein geranylgeranyltransferase type II.; [GO:0004663] Rab geranylgeranyltransferase activity 24.08 0.8222 39 Mapoly0025s0135 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PTHR10436:SF53] SUBFAMILY NOT NAMED 24.39 0.8405 40 Mapoly0013s0063 [GO:0008168] methyltransferase activity; [PTHR13600] LEUCINE CARBOXYL METHYLTRANSFERASE; [GO:0032259] methylation; [PF04072] Leucine carboxyl methyltransferase; [KOG2918] Carboxymethyl transferase 26.31 0.7757 41 Mapoly0122s0052 [PF00011] Hsp20/alpha crystallin family 27.39 0.8252 42 Mapoly0088s0080 [PTHR24414] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF01344] Kelch motif 27.93 0.7685 43 Mapoly0007s0121 [PTHR21027] TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54; [PF12928] tRNA-splicing endonuclease subunit sen54 N-term 28.28 0.8508 44 Mapoly0137s0034 [PF02676] Methyltransferase TYW3; [PTHR23245] UNCHARACTERIZED; [PF13415] Galactose oxidase, central domain; [KOG1227] Putative methyltransferase; [PF02475] Met-10+ like-protein; [GO:0016740] transferase activity 28.98 0.8598 45 Mapoly0159s0013 [PF13839] GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p; [PTHR32285] FAMILY NOT NAMED; [PF14416] PMR5 N terminal Domain 29.39 0.8153 46 Mapoly0014s0147 [PTHR10072] IRON-SULFUR CLUSTER ASSEMBLY PROTEIN 29.88 0.8255 47 Mapoly0081s0061 [KOG0454] 3-isopropylmalate dehydratase (aconitase superfamily); [4.2.1.35] (R)-2-methylmalate dehydratase.; [4.2.1.33] 3-isopropylmalate dehydratase.; [K01703] 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]; [GO:0008152] metabolic process; [PTHR11670] ACONITASE; [PF00330] Aconitase family (aconitate hydratase) 30.00 0.8449 48 Mapoly0043s0079 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 31.02 0.8492 49 Mapoly0002s0332 [KOG2367] Alpha-isopropylmalate synthase/homocitrate synthase; [PF00682] HMGL-like; [2.3.3.13] 2-isopropylmalate synthase.; [GO:0003852] 2-isopropylmalate synthase activity; [K01649] 2-isopropylmalate synthase [EC:2.3.3.13]; [GO:0009098] leucine biosynthetic process; [PTHR10277] HOMOCITRATE SYNTHASE-RELATED; [PTHR10277:SF9] 2-ISOPROPYLMALATE SYNTHASE; [PF08502] LeuA allosteric (dimerisation) domain; [GO:0003824] catalytic activity 31.50 0.8441 50 Mapoly0007s0157 [4.2.2.2] Pectate lyase.; [K01728] pectate lyase [EC:4.2.2.2]; [PF00544] Pectate lyase; [PTHR31683] FAMILY NOT NAMED 31.73 0.8242