Guide Gene

Gene ID
Mapoly0007s0129
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005515] protein binding; [PF00646] F-box domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0007s0129 [GO:0005515] protein binding; [PF00646] F-box domain 0.00 1.0000
1 Mapoly0047s0046 [KOG2740] Clathrin-associated protein medium chain; [GO:0016192] vesicle-mediated transport; [K12398] AP-3 complex subunit mu; [GO:0005515] protein binding; [PTHR11998] CLATHRIN COAT ASSEMBLY PROTEIN; [PF00928] Adaptor complexes medium subunit family; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [PTHR11998:SF4] CLATHRIN COAT ADAPTOR AP3 MEDIUM CHAIN1.000.9317
2 Mapoly0164s0014 [KOG0341] DEAD-box protein abstrakt; [GO:0005524] ATP binding; [K13116] ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF20] SUBFAMILY NOT NAMED2.450.9314
3 Mapoly0043s0079 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family2.830.9142
4 Mapoly0082s0059 -2.830.9035
5 Mapoly0007s0115 [KOG0959] N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily; [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16)4.240.9082
6 Mapoly0001s0546 [PF15264] Tumour suppressing sub-chromosomal transferable candidate 44.470.9101
7 Mapoly0093s0084 [PF12752] SUZ domain; [GO:0003676] nucleic acid binding; [PF01424] R3H domain; [PTHR15672] CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN4.470.8812
8 Mapoly0002s0048 [KOG2374] Uncharacterized conserved protein; [PF09740] Uncharacterized conserved protein (DUF2043)4.580.9048
9 Mapoly0062s0011 [KOG2654] Uncharacterized conserved protein; [K13106] pre-mRNA-splicing factor CWC26; [PTHR31809] FAMILY NOT NAMED; [PF09736] Pre-mRNA-splicing factor of RES complex4.580.9144
10 Mapoly0070s0026 [GO:0008375] acetylglucosaminyltransferase activity; [GO:0016020] membrane; [PF02485] Core-2/I-Branching enzyme; [PTHR31042] FAMILY NOT NAMED4.580.8812
11 Mapoly0011s0200 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02836] peptide chain release factor RF-2; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PTHR11075:SF6] PEPTIDE CHAIN RELEASE FACTOR 2; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity4.690.8941
12 Mapoly0151s0045 [GO:0016020] membrane; [GO:0004222] metalloendopeptidase activity; [GO:0008233] peptidase activity; [K06013] STE24 endopeptidase [EC:3.4.24.84]; [GO:0071586] CAAX-box protein processing; [PF01435] Peptidase family M48; [3.4.24.84] Ste24 endopeptidase.; [PTHR10120] CAAX PRENYL PROTEASE 1; [KOG2719] Metalloprotease; [GO:0006508] proteolysis5.390.8686
13 Mapoly0179s0015 [3.1.2.15] Ubiquitin thiolesterase.; [PTHR12947] AMSH; [KOG2880] SMAD6 interacting protein AMSH, contains JAB/MPN/Mov34 domain; [PF08969] USP8 dimerisation domain; [K11866] STAM-binding protein [EC:3.1.2.15]; [GO:0005515] protein binding; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [PTHR12947:SF4] SUBFAMILY NOT NAMED5.480.8873
14 Mapoly0011s0199 [PTHR13091:SF0] SUBFAMILY NOT NAMED; [PTHR13091] AMPLIFIED IN BREAST CANCER 2-RELATED; [GO:0000184] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; [PF10220] Uncharacterized conserved protein (DUF2146)6.000.9029
15 Mapoly0133s0016 [GO:0008408] 3'-5' exonuclease activity; [PF01927] Mut7-C RNAse domain; [PF01612] 3'-5' exonuclease; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [PTHR12124] POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED; [K09122] hypothetical protein7.070.8527
16 Mapoly0020s0141 [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT7.870.8666
17 Mapoly0083s0005 [PF05773] RWD domain; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00035] Double-stranded RNA binding motif; [GO:0005515] protein binding; [KOG0920] ATP-dependent RNA helicase A; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold8.370.8984
18 Mapoly0071s0029 [PF11919] Domain of unknown function (DUF3437); [KOG1851] Uncharacterized conserved protein; [PTHR32170] FAMILY NOT NAMED; [PTHR32170:SF0] SUBFAMILY NOT NAMED8.490.8909
19 Mapoly0074s0061 -8.540.8428
20 Mapoly0067s0042 [PTHR21494] ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 (ASC-1 COMPLEX SUBUNIT P100); [PF02845] CUE domain; [GO:0005515] protein binding; [PTHR21494:SF0] SUBFAMILY NOT NAMED; [KOG4501] Transcription coactivator complex, P100 component9.170.8874
21 Mapoly0097s0077 [PTHR12888:SF0] SUBFAMILY NOT NAMED; [K13345] peroxin-12; [GO:0008270] zinc ion binding; [GO:0006625] protein targeting to peroxisome; [PF04757] Pex2 / Pex12 amino terminal region; [PF13923] Zinc finger, C3HC4 type (RING finger); [PTHR12888] PEROXISOME ASSEMBLY PROTEIN 12 (PEROXIN-12); [GO:0005779] integral to peroxisomal membrane; [GO:0008022] protein C-terminus binding; [KOG0826] Predicted E3 ubiquitin ligase involved in peroxisome organization10.580.8855
22 Mapoly0159s0019 [KOG4638] Uncharacterized conserved protein; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR15860] UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN10.820.8891
23 Mapoly0021s0149 [PTHR14155] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding10.860.8481
24 Mapoly0001s0234 [PTHR21230] VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED; [KOG3251] Golgi SNAP receptor complex member; [K08496] golgi SNAP receptor complex member 2; [PF12352] Snare region anchored in the vesicle membrane C-terminus; [PTHR21230:SF1] MEMBRIN11.620.8717
25 Mapoly0020s0052 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00397] WW domain; [3.6.4.13] RNA helicase.; [GO:0005515] protein binding; [K12823] ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding11.620.8593
26 Mapoly0042s0034 [PTHR23131:SF0] SUBFAMILY NOT NAMED; [KOG0813] Glyoxylase; [PF00753] Metallo-beta-lactamase superfamily; [PTHR23131] METALLO-BETA-LACTAMASE RELATED12.960.8610
27 Mapoly0040s0004 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [PF13921] Myb-like DNA-binding domain14.420.8720
28 Mapoly0128s0010 [PTHR12749:SF0] SUBFAMILY NOT NAMED; [PTHR12749] EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1; [PF14520] Helix-hairpin-helix domain; [PF03834] Binding domain of DNA repair protein Ercc1 (rad10/Swi10); [GO:0005634] nucleus; [GO:0006281] DNA repair; [GO:0003684] damaged DNA binding; [K10849] DNA excision repair protein ERCC-1; [KOG2841] Structure-specific endonuclease ERCC1-XPF, ERCC1 component; [GO:0004519] endonuclease activity14.970.8644
29 Mapoly0053s0027 [PF14778] Olfactory receptor 4-like; [KOG4703] Uncharacterized conserved protein15.170.7848
30 Mapoly0025s0052 [PTHR12984] SCY1-RELATED S/T PROTEIN KINASE-LIKE; [GO:0005524] ATP binding; [PTHR12984:SF3] SCY1(YEAST) PROTEIN KINASE-LIKE; [PF00069] Protein kinase domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [KOG4693] Uncharacterized conserved protein, contains kelch repeat; [PF01344] Kelch motif; [GO:0006468] protein phosphorylation; [PF00646] F-box domain15.300.8615
31 Mapoly0036s0080 [PF07524] Bromodomain associated; [PF10406] Transcription factor TFIID complex subunit 8 C-term; [PTHR23307:SF0] SUBFAMILY NOT NAMED; [PTHR23307] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8; [KOG2389] Predicted bromodomain transcription factor15.590.8389
32 Mapoly0138s0041 [PTHR30602] AMINO-ACID ACETYLTRANSFERASE; [2.3.1.1] Amino-acid N-acetyltransferase.; [K14682] amino-acid N-acetyltransferase [EC:2.3.1.1]; [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PF00696] Amino acid kinase family; [KOG2436] Acetylglutamate kinase/acetylglutamate synthase15.870.8847
33 Mapoly0167s0022 [PTHR15954] UNCHARACTERIZED; [PF08700] Vps51/Vps67; [PTHR15954:SF4] SUBFAMILY NOT NAMED15.870.8638
34 Mapoly0086s0043 [PTHR24412] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF01344] Kelch motif15.970.8848
35 Mapoly0016s0098 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF00170] bZIP transcription factor16.430.8509
36 Mapoly0178s0004 [GO:0005515] protein binding; [PF00646] F-box domain18.250.8635
37 Mapoly0025s0100 [PTHR13124] 39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED; [KOG4548] Mitochondrial ribosomal protein L17; [PF11788] 39S mitochondrial ribosomal protein L4618.330.8693
38 Mapoly0129s0033 [GO:0034314] Arp2/3 complex-mediated actin nucleation; [PTHR23331:SF1] CXYORF1; [GO:0071203] WASH complex; [GO:0043014] alpha-tubulin binding; [PTHR23331] CXYORF1; [GO:0005769] early endosome; [PF11945] WAHD domain of WASH complex18.650.8049
39 Mapoly0149s0031 [GO:0005524] ATP binding; [PTHR24031:SF68] SUBFAMILY NOT NAMED; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0350] DEAD-box ATP-dependent RNA helicase18.760.8596
40 Mapoly0061s0123 [GO:0005515] protein binding; [PTHR19846] WD40 REPEAT PROTEIN; [KOG0272] U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats); [K12662] U4/U6 small nuclear ribonucleoprotein PRP4; [PF00400] WD domain, G-beta repeat; [PF08799] pre-mRNA processing factor 4 (PRP4) like19.000.8826
41 Mapoly0015s0031 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006470] protein dephosphorylation; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [KOG1719] Dual specificity phosphatase; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity19.600.8532
42 Mapoly0088s0065 [PF12756] C2H2 type zinc-finger (2 copies); [PF12171] Zinc-finger double-stranded RNA-binding; [KOG0717] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [K09506] DnaJ homolog subfamily A member 520.450.8798
43 Mapoly0116s0032 [PTHR13253] FAMILY NOT NAMED; [PF00581] Rhodanese-like domain20.710.8167
44 Mapoly0022s0104 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [K08853] AP2-associated kinase [EC:2.7.11.1]; [KOG1989] ARK protein kinase family; [PTHR22967] SERINE/THREONINE PROTEIN KINASE21.020.8642
45 Mapoly0113s0062 [GO:0008762] UDP-N-acetylmuramate dehydrogenase activity; [KOG1232] Proteins containing the FAD binding domain; [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [PF02913] FAD linked oxidases, C-terminal domain; [GO:0016491] oxidoreductase activity; [GO:0003824] catalytic activity; [PTHR11748] D-LACTATE DEHYDROGENASE; [PF01565] FAD binding domain21.330.8640
46 Mapoly0088s0081 [K07976] Rab family, other; [KOG0097] GTPase Rab14, small G protein superfamily; [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [PTHR24073:SF128] SUBFAMILY NOT NAMED; [PF00071] Ras family; [GO:0005525] GTP binding21.560.8342
47 Mapoly0005s0224 [3.2.2.21] DNA-3-methyladenine glycosylase II.; [GO:0006284] base-excision repair; [KOG1918] 3-methyladenine DNA glycosidase; [PTHR10242] N-GLYCOSYLASE/DNA LYASE; [PF00730] HhH-GPD superfamily base excision DNA repair protein; [K01247] DNA-3-methyladenine glycosylase II [EC:3.2.2.21]; [PTHR10242:SF0] N-GLYCOSYLASE/DNA LYASE22.800.8613
48 Mapoly0062s0077 [GO:0016020] membrane; [PF02714] Domain of unknown function DUF221; [PF14703] Domain of unknown function (DUF4463); [PF13967] Late exocytosis, associated with Golgi transport; [KOG1134] Uncharacterized conserved protein; [PTHR13018] PROBABLE MEMBRANE PROTEIN DUF221-RELATED22.800.8305
49 Mapoly0036s0109 [PTHR12360] NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 (NFX1); [KOG1952] Transcription factor NF-X1, contains NFX-type Zn2+-binding and R3H domains; [PTHR12360:SF0] TRANSCRIPTIONAL REPRESSOR NF-X1; [GO:0003676] nucleic acid binding; [PF01424] R3H domain23.070.8624
50 Mapoly0129s0017 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006470] protein dephosphorylation; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [KOG1718] Dual specificity phosphatase; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity23.370.8413
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