Guide Gene

Gene ID
Mapoly0036s0109
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR12360] NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 (NFX1); [KOG1952] Transcription factor NF-X1, contains NFX-type Zn2+-binding and R3H domains; [PTHR12360:SF0] TRANSCRIPTIONAL REPRESSOR NF-X1; [GO:0003676] nucleic acid binding; [PF01424] R3H domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0036s0109 [PTHR12360] NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 (NFX1); [KOG1952] Transcription factor NF-X1, contains NFX-type Zn2+-binding and R3H domains; [PTHR12360:SF0] TRANSCRIPTIONAL REPRESSOR NF-X1; [GO:0003676] nucleic acid binding; [PF01424] R3H domain 0.00 1.0000
1 Mapoly0020s0117 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG1947] Leucine rich repeat proteins, some proteins contain F-box1.410.9042
2 Mapoly0001s0182 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain3.000.8750
3 Mapoly0008s0085 [GO:0016021] integral to membrane; [PF03124] EXS family; [PTHR10783] XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED; [PTHR10783:SF9] EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN3.320.8709
4 Mapoly0088s0065 [PF12756] C2H2 type zinc-finger (2 copies); [PF12171] Zinc-finger double-stranded RNA-binding; [KOG0717] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [K09506] DnaJ homolog subfamily A member 54.000.9018
5 Mapoly0025s0052 [PTHR12984] SCY1-RELATED S/T PROTEIN KINASE-LIKE; [GO:0005524] ATP binding; [PTHR12984:SF3] SCY1(YEAST) PROTEIN KINASE-LIKE; [PF00069] Protein kinase domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [KOG4693] Uncharacterized conserved protein, contains kelch repeat; [PF01344] Kelch motif; [GO:0006468] protein phosphorylation; [PF00646] F-box domain4.240.8799
6 Mapoly0043s0079 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family4.580.8910
7 Mapoly0005s0132 [GO:0006511] ubiquitin-dependent protein catabolic process; [KOG1816] Ubiquitin fusion-degradation protein; [PTHR12555] UBIQUITIN FUSION DEGRADATON PROTEIN 1; [PF03152] Ubiquitin fusion degradation protein UFD15.480.8854
8 Mapoly0130s0047 -7.210.8407
9 Mapoly0138s0041 [PTHR30602] AMINO-ACID ACETYLTRANSFERASE; [2.3.1.1] Amino-acid N-acetyltransferase.; [K14682] amino-acid N-acetyltransferase [EC:2.3.1.1]; [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PF00696] Amino acid kinase family; [KOG2436] Acetylglutamate kinase/acetylglutamate synthase7.210.8878
10 Mapoly0118s0030 [PF01490] Transmembrane amino acid transporter protein; [KOG1305] Amino acid transporter protein; [PTHR22950] AMINO ACID TRANSPORTER8.060.8634
11 Mapoly0061s0105 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN11.220.8516
12 Mapoly0023s0020 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [PF01255] Putative undecaprenyl diphosphate synthase; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR10291] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE; [K11778] cis-prenyltransferase, dehydrodolichyl diphosphate synthase [EC:2.5.1.-]; [PTHR10291:SF0] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE11.660.8540
13 Mapoly0067s0042 [PTHR21494] ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 (ASC-1 COMPLEX SUBUNIT P100); [PF02845] CUE domain; [GO:0005515] protein binding; [PTHR21494:SF0] SUBFAMILY NOT NAMED; [KOG4501] Transcription coactivator complex, P100 component11.660.8779
14 Mapoly0002s0048 [KOG2374] Uncharacterized conserved protein; [PF09740] Uncharacterized conserved protein (DUF2043)12.250.8729
15 Mapoly0164s0014 [KOG0341] DEAD-box protein abstrakt; [GO:0005524] ATP binding; [K13116] ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF20] SUBFAMILY NOT NAMED14.250.8790
16 Mapoly0159s0013 [PF13839] GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p; [PTHR32285] FAMILY NOT NAMED; [PF14416] PMR5 N terminal Domain15.330.8322
17 Mapoly0015s0012 [PTHR22093] LEUKOCYTE RECEPTOR CLUSTER (LRC) MEMBER 115.560.8446
18 Mapoly0071s0001 [PTHR23264] NUCLEOTIDE-BINDING PROTEIN NBP35(YEAST)-RELATED; [PF10609] ParA/MinD ATPase like; [KOG3022] Predicted ATPase, nucleotide-binding; [PF02374] Anion-transporting ATPase16.520.8448
19 Mapoly0037s0014 [GO:0005524] ATP binding; [KOG0055] Multidrug/pheromone exporter, ABC superfamily; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter16.580.8422
20 Mapoly0001s0546 [PF15264] Tumour suppressing sub-chromosomal transferable candidate 417.320.8667
21 Mapoly0011s0127 [GO:0016020] membrane; [GO:0005524] ATP binding; [KOG0061] Transporter, ABC superfamily (Breast cancer resistance protein); [GO:0016887] ATPase activity; [PTHR19241] ATP-BINDING CASSETTE TRANSPORTER; [PF01061] ABC-2 type transporter; [PF00005] ABC transporter18.170.8190
22 Mapoly0020s0051 [GO:0003677] DNA binding; [PF02365] No apical meristem (NAM) protein; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR31989] FAMILY NOT NAMED18.170.8570
23 Mapoly0156s0017 [PF07719] Tetratricopeptide repeat18.730.8404
24 Mapoly0019s0108 [PF02033] Ribosome-binding factor A; [GO:0006364] rRNA processing19.180.8566
25 Mapoly0055s0069 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006470] protein dephosphorylation; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity21.910.8453
26 Mapoly0007s0129 [GO:0005515] protein binding; [PF00646] F-box domain23.070.8624
27 Mapoly0140s0002 -23.320.8374
28 Mapoly0070s0026 [GO:0008375] acetylglucosaminyltransferase activity; [GO:0016020] membrane; [PF02485] Core-2/I-Branching enzyme; [PTHR31042] FAMILY NOT NAMED24.490.8400
29 Mapoly0006s0096 [PTHR16201] FAMILY NOT NAMED; [PF04193] PQ loop repeat26.380.8400
30 Mapoly0020s0141 [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT26.830.8331
31 Mapoly0021s0032 -27.200.8373
32 Mapoly0024s0139 [PTHR13391] TUBULIN-RELATED PROTEIN; [PF14881] Tubulin domain; [PF10644] Misato Segment II tubulin-like domain; [KOG2530] Members of tubulin/FtsZ family27.910.8461
33 Mapoly0074s0045 [PTHR23329] TUFTELIN-INTERACTING PROTEIN 11-RELATED; [PF01585] G-patch domain; [GO:0003676] nucleic acid binding; [PF01424] R3H domain28.740.8244
34 Mapoly0116s0032 [PTHR13253] FAMILY NOT NAMED; [PF00581] Rhodanese-like domain30.660.8018
35 Mapoly0141s0029 [PF13855] Leucine rich repeat; [KOG1187] Serine/threonine protein kinase; [PF13516] Leucine Rich repeat; [PF07714] Protein tyrosine kinase; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE30.710.8344
36 Mapoly0001s0226 [GO:0016020] membrane; [KOG1291] Mn2+ and Fe2+ transporters of the NRAMP family; [PF01566] Natural resistance-associated macrophage protein; [GO:0006810] transport; [K14513] ethylene-insensitive protein 2; [PTHR11706] MANGANESE TRANSPORTER; [GO:0005215] transporter activity30.940.8387
37 Mapoly0035s0119 -31.030.7940
38 Mapoly0064s0016 [GO:0003723] RNA binding; [PF01985] CRS1 / YhbY (CRM) domain; [PTHR31846] FAMILY NOT NAMED31.430.8281
39 Mapoly0047s0046 [KOG2740] Clathrin-associated protein medium chain; [GO:0016192] vesicle-mediated transport; [K12398] AP-3 complex subunit mu; [GO:0005515] protein binding; [PTHR11998] CLATHRIN COAT ASSEMBLY PROTEIN; [PF00928] Adaptor complexes medium subunit family; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [PTHR11998:SF4] CLATHRIN COAT ADAPTOR AP3 MEDIUM CHAIN31.450.8440
40 Mapoly0002s0332 [KOG2367] Alpha-isopropylmalate synthase/homocitrate synthase; [PF00682] HMGL-like; [2.3.3.13] 2-isopropylmalate synthase.; [GO:0003852] 2-isopropylmalate synthase activity; [K01649] 2-isopropylmalate synthase [EC:2.3.3.13]; [GO:0009098] leucine biosynthetic process; [PTHR10277] HOMOCITRATE SYNTHASE-RELATED; [PTHR10277:SF9] 2-ISOPROPYLMALATE SYNTHASE; [PF08502] LeuA allosteric (dimerisation) domain; [GO:0003824] catalytic activity31.750.8404
41 Mapoly0011s0200 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02836] peptide chain release factor RF-2; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PTHR11075:SF6] PEPTIDE CHAIN RELEASE FACTOR 2; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity32.400.8374
42 Mapoly0094s0056 -33.050.8358
43 Mapoly0095s0055 [PF14492] Elongation Factor G, domain II; [3.6.5.-] Acting on GTP; involved in cellular and subcellular movement.; [PTHR23115:SF3] TRANSLATION ELONGATION FACTOR; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [K14536] ribosome assembly protein 1 [EC:3.6.5.-]; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [KOG0467] Translation elongation factor 2/ribosome biogenesis protein RIA1 and related proteins; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 234.470.8373
44 Mapoly0007s0115 [KOG0959] N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily; [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16)36.000.8430
45 Mapoly0178s0004 [GO:0005515] protein binding; [PF00646] F-box domain36.330.8332
46 Mapoly0149s0031 [GO:0005524] ATP binding; [PTHR24031:SF68] SUBFAMILY NOT NAMED; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0350] DEAD-box ATP-dependent RNA helicase37.090.8336
47 Mapoly0011s0180 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PTHR24223] FAMILY NOT NAMED; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [KOG0054] Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PF00005] ABC transporter39.600.8265
48 Mapoly0128s0016 [PTHR31715] FAMILY NOT NAMED; [K03189] urease accessory protein; [PF02492] CobW/HypB/UreG, nucleotide-binding domain40.190.8008
49 Mapoly0058s0040 [KOG4172] Predicted E3 ubiquitin ligase; [PTHR14879] CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING; [PF13920] Zinc finger, C3HC4 type (RING finger)40.300.7917
50 Mapoly0025s0135 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PTHR10436:SF53] SUBFAMILY NOT NAMED40.530.8280
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