Guide Gene

Gene ID
Mapoly0056s0050
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF00295] Glycosyl hydrolases family 28; [GO:0004650] polygalacturonase activity; [GO:0005975] carbohydrate metabolic process; [PTHR31339] FAMILY NOT NAMED; [PTHR31339:SF0] SUBFAMILY NOT NAMED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0056s0050 [PF00295] Glycosyl hydrolases family 28; [GO:0004650] polygalacturonase activity; [GO:0005975] carbohydrate metabolic process; [PTHR31339] FAMILY NOT NAMED; [PTHR31339:SF0] SUBFAMILY NOT NAMED 0.00 1.0000
1 Mapoly0058s0027 [PF03878] YIF1; [KOG3094] Predicted membrane protein; [PTHR14083] YIP1 INTERACTING FACTOR HOMOLOG (YIF1 PROTEIN)3.000.8001
2 Mapoly0118s0004 [PF14770] Transmembrane protein 18; [PTHR22593] FAMILY NOT NAMED4.470.7573
3 Mapoly0165s0018 [PF13414] TPR repeat; [PTHR21581] D-ALANYL-D-ALANINE CARBOXYPEPTIDASE4.470.7327
4 Mapoly0049s0134 -5.200.7554
5 Mapoly0099s0024 [KOG0266] WD40 repeat-containing protein; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat7.070.6883
6 Mapoly0076s0086 -8.720.6572
7 Mapoly0122s0047 [PTHR18829:SF0] SUBFAMILY NOT NAMED; [PTHR18829] FAMILY NOT NAMED; [PF09811] Essential protein Yae1, N terminal9.380.7414
8 Mapoly0043s0136 [PF07719] Tetratricopeptide repeat; [PF13414] TPR repeat; [PTHR22904] TPR REPEAT CONTAINING PROTEIN11.220.6917
9 Mapoly0105s0010 -11.490.6504
10 Mapoly0002s0101 [KOG1197] Predicted quinone oxidoreductase; [K00344] NADPH2:quinone reductase [EC:1.6.5.5]; [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [1.6.5.5] NADPH:quinone reductase.; [GO:0016491] oxidoreductase activity; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED12.650.6615
11 Mapoly0014s0047 [PTHR22602:SF0] SUBFAMILY NOT NAMED; [GO:0005737] cytoplasm; [PF08669] Glycine cleavage T-protein C-terminal barrel domain; [GO:0004047] aminomethyltransferase activity; [GO:0006546] glycine catabolic process; [PTHR22602] UNCHARACTERIZED; [K06980] ribosomal RNA large subunit methyltransferase F [EC:2.1.1.181]; [KOG2929] Transcription factor, component of CCR4 transcriptional complex; [PF01571] Aminomethyltransferase folate-binding domain15.230.6907
12 Mapoly0019s0110 -16.700.6899
13 Mapoly0124s0029 [PF03966] Trm112p-like protein16.730.6571
14 Mapoly0002s0050 [KOG4697] Integral membrane protein involved in transport between the late Golgi and endosome; [PTHR12952] SYS1; [PF09801] Integral membrane protein S linking to the trans Golgi network; [PTHR12952:SF0] SUBFAMILY NOT NAMED23.660.6407
15 Mapoly0016s0028 [K13118] protein DGCR14; [KOG2627] Nuclear protein ES2; [PTHR12940] ES-2 PROTEIN - RELATED; [PF09751] Nuclear protein Es225.340.7052
16 Mapoly0014s0120 [GO:0055114] oxidation-reduction process; [KOG0022] Alcohol dehydrogenase, class III; [PTHR11695:SF280] ALCOHOL DEHYDROGENASE; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED26.150.6291
17 Mapoly0108s0064 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding28.620.6797
18 Mapoly0051s0043 [PTHR18895] METHYLTRANSFERASE; [PF13659] Methyltransferase domain; [KOG2904] Predicted methyltransferase33.240.5771
19 Mapoly0117s0006 [GO:0006950] response to stress; [PF00582] Universal stress protein family; [PTHR31964] FAMILY NOT NAMED34.940.6800
20 Mapoly0178s0026 [PF00280] Potato inhibitor I family; [GO:0009611] response to wounding; [GO:0004867] serine-type endopeptidase inhibitor activity35.330.6495
21 Mapoly0034s0075 -36.120.6386
22 Mapoly0052s0120 [K06664] peroxin-2; [PTHR12590:SF3] SUBFAMILY NOT NAMED; [KOG2879] Predicted E3 ubiquitin ligase; [PF04757] Pex2 / Pex12 amino terminal region; [PTHR12590] PEROXISOMAL PROTEIN RELATED36.880.6612
23 Mapoly0041s0146 [PTHR31446] FAMILY NOT NAMED; [PF02681] Divergent PAP2 family38.240.6316
24 Mapoly0073s0072 [GO:0016787] hydrolase activity; [PF07687] Peptidase dimerisation domain; [3.5.1.14] Aminoacylase.; [PTHR11014] PEPTIDASE M20 FAMILY MEMBER; [GO:0008152] metabolic process; [PF01546] Peptidase family M20/M25/M40; [K14677] aminoacylase [EC:3.5.1.14]; [KOG2275] Aminoacylase ACY1 and related metalloexopeptidases40.060.6628
25 Mapoly0135s0030 -41.350.6599
26 Mapoly0107s0023 [GO:0016020] membrane; [PTHR20917] PNAS-RELATED; [PF01956] Integral membrane protein DUF106; [KOG3312] Predicted membrane protein54.390.6114
27 Mapoly0001s0443 [GO:0007264] small GTPase mediated signal transduction; [K07890] Ras-related protein Rab-21; [PTHR24073] FAMILY NOT NAMED; [KOG0088] GTPase Rab21, small G protein superfamily; [PF00071] Ras family; [GO:0005525] GTP binding; [PTHR24073:SF8] SUBFAMILY NOT NAMED56.180.6799
28 Mapoly0007s0172 [KOG4711] Predicted membrane protein; [PF11744] Aluminium activated malate transporter; [PTHR31086] FAMILY NOT NAMED; [GO:0015743] malate transport58.690.6227
29 Mapoly0005s0123 [K13506] glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]; [PTHR23063:SF2] ACYLTRANSFERASE-LIKE PROTEIN 4; [PTHR23063] ACETYLTRANSFERASE-RELATED; [PF01553] Acyltransferase; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [2.3.1.15] Glycerol-3-phosphate 1-O-acyltransferase.; [KOG2898] Predicted phosphate acyltransferase, contains PlsC domain59.460.6465
30 Mapoly0189s0016 -60.420.6493
31 Mapoly0209s0007 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN60.790.6328
32 Mapoly0152s0034 [PF03162] Tyrosine phosphatase family; [PTHR31126] FAMILY NOT NAMED61.190.6205
33 Mapoly0005s0020 [PF00929] Exonuclease; [PTHR23044] 3'-5' EXONUCLEASE ERI1-RELATED; [KOG0542] Predicted exonuclease61.510.5704
34 Mapoly0022s0095 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR22952] CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED; [PF00170] bZIP transcription factor65.970.6332
35 Mapoly0004s0036 [PF03364] Polyketide cyclase / dehydrase and lipid transport; [PTHR12901] SPERM PROTEIN HOMOLOG; [KOG3177] Oligoketide cyclase/lipid transport protein68.280.6059
36 Mapoly0130s0019 [GO:0005737] cytoplasm; [PF02544] 3-oxo-5-alpha-steroid 4-dehydrogenase; [GO:0016021] integral to membrane; [GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors; [PTHR14624] DFG10 PROTEIN; [KOG1640] Predicted steroid reductase; [GO:0006629] lipid metabolic process68.690.6644
37 Mapoly0051s0108 [PF11152] Protein of unknown function (DUF2930)69.090.6288
38 Mapoly0008s0206 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [PTHR10759:SF2] STRUCTURAL CONSTITUENT OF RIBOSOME; [GO:0005622] intracellular; [PTHR10759] 60S RIBOSOMAL PROTEIN L34; [GO:0006412] translation69.890.6218
39 Mapoly0071s0020 [PTHR31460] FAMILY NOT NAMED; [PTHR31460:SF0] SUBFAMILY NOT NAMED72.870.6099
40 Mapoly0175s0003 -73.320.6118
41 Mapoly0003s0018 [KOG2632] Rhomboid family proteins; [PTHR22790] RHOMBOID-RELATED; [GO:0016021] integral to membrane; [PTHR22790:SF13] SUBFAMILY NOT NAMED; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family76.620.6116
42 Mapoly0001s0511 -78.080.5955
43 Mapoly0094s0055 [KOG0409] Predicted dehydrogenase; [GO:0055114] oxidation-reduction process; [PF03446] NAD binding domain of 6-phosphogluconate dehydrogenase; [PF01116] Fructose-bisphosphate aldolase class-II; [K00120] glucose-fructose oxidoreductase [EC:1.1.99.28]; [PTHR22981] 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED; [GO:0005975] carbohydrate metabolic process; [GO:0008270] zinc ion binding; [GO:0004616] phosphogluconate dehydrogenase (decarboxylating) activity; [1.1.-.-] Acting on the CH-OH group of donors.; [GO:0051287] NAD binding; [PTHR22981:SF27] SUBFAMILY NOT NAMED; [PF07005] Protein of unknown function, DUF1537; [GO:0006098] pentose-phosphate shunt; [GO:0016832] aldehyde-lyase activity; [PF14833] NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase78.570.5696
44 Mapoly0043s0142 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE82.870.6566
45 Mapoly0007s0150 [PTHR12806:SF0] SUBFAMILY NOT NAMED; [K12188] ESCRT-II complex subunit VPS22; [PF04157] EAP30/Vps36 family; [KOG3341] RNA polymerase II transcription factor complex subunit; [PTHR12806] EAP30 SUBUNIT OF ELL COMPLEX83.070.6082
46 Mapoly0115s0059 [PTHR10281] MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED; [GO:0020037] heme binding; [PTHR10281:SF4] CYTOCHROME B5 DOMAIN-CONTAINING PROTEIN 2; [KOG1108] Predicted heme/steroid binding protein; [PF00173] Cytochrome b5-like Heme/Steroid binding domain85.350.5445
47 Mapoly0123s0026 -89.010.5526
48 Mapoly0127s0028 [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF00722] Glycosyl hydrolases family 1689.400.6411
49 Mapoly0037s0106 [PTHR10030] ALPHA-L-FUCOSIDASE; [PF00754] F5/8 type C domain; [GO:0004560] alpha-L-fucosidase activity; [PF01120] Alpha-L-fucosidase; [GO:0005975] carbohydrate metabolic process; [GO:0007155] cell adhesion89.670.6219
50 Mapoly0062s0022 [PF04674] Phosphate-induced protein 1 conserved region; [PTHR31279] FAMILY NOT NAMED95.440.5980
Showing 1 to 50 of 200 records
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