Guide Gene

Gene ID
Mapoly0007s0150
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR12806:SF0] SUBFAMILY NOT NAMED; [K12188] ESCRT-II complex subunit VPS22; [PF04157] EAP30/Vps36 family; [KOG3341] RNA polymerase II transcription factor complex subunit; [PTHR12806] EAP30 SUBUNIT OF ELL COMPLEX

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0007s0150 [PTHR12806:SF0] SUBFAMILY NOT NAMED; [K12188] ESCRT-II complex subunit VPS22; [PF04157] EAP30/Vps36 family; [KOG3341] RNA polymerase II transcription factor complex subunit; [PTHR12806] EAP30 SUBUNIT OF ELL COMPLEX 0.00 1.0000
1 Mapoly0038s0099 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [PTHR15664:SF1] SUBFAMILY NOT NAMED; [KOG4753] Predicted membrane protein1.730.7718
2 Mapoly0062s0062 [KOG2382] Predicted alpha/beta hydrolase; [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family2.650.7972
3 Mapoly0135s0030 -2.830.7823
4 Mapoly0033s0037 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006470] protein dephosphorylation; [KOG1716] Dual specificity phosphatase; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity4.470.7451
5 Mapoly0002s0050 [KOG4697] Integral membrane protein involved in transport between the late Golgi and endosome; [PTHR12952] SYS1; [PF09801] Integral membrane protein S linking to the trans Golgi network; [PTHR12952:SF0] SUBFAMILY NOT NAMED5.480.7231
6 Mapoly0007s0151 [PF05768] Glutaredoxin-like domain (DUF836)8.490.7275
7 Mapoly0132s0009 -9.380.7498
8 Mapoly0188s0014 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0750] Mitochondrial solute carrier protein9.380.7356
9 Mapoly0051s0108 [PF11152] Protein of unknown function (DUF2930)10.680.7421
10 Mapoly0146s0032 -11.830.6836
11 Mapoly0179s0007 [PF14283] Domain of unknown function (DUF4366)13.490.7399
12 Mapoly0047s0020 [PF03226] Yippee zinc-binding/DNA-binding /Mis18, centromere assembly; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES; [KOG3399] Predicted Yippee-type zinc-binding protein15.200.7219
13 Mapoly0023s0044 [PTHR12052:SF4] THIOREDOXIN-LIKE PROTEN 4A, 4B; [GO:0007067] mitosis; [GO:0005681] spliceosomal complex; [PTHR12052] THIOREDOXIN-LIKE PROTEN 4A, 4B; [KOG3414] Component of the U4/U6.U5 snRNP/mitosis protein DIM1; [PF02966] Mitosis protein DIM118.330.6635
14 Mapoly0090s0037 [PTHR15561:SF0] SUBFAMILY NOT NAMED; [KOG4168] Predicted RNA polymerase III subunit C17; [PTHR15561] CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN; [PF03874] RNA polymerase Rpb4; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity18.330.7033
15 Mapoly0003s0260 [GO:0005737] cytoplasm; [PF04055] Radical SAM superfamily; [PTHR30544] 23S RRNA METHYLTRANSFERASE; [PF13394] 4Fe-4S single cluster domain; [GO:0008173] RNA methyltransferase activity; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [GO:0006364] rRNA processing18.890.6050
16 Mapoly0151s0012 [PF12937] F-box-like; [GO:0005515] protein binding; [PTHR12874] FAMILY NOT NAMED; [K10295] F-box protein 9; [KOG2997] F-box protein FBX9; [PTHR12874:SF9] SUBFAMILY NOT NAMED18.970.7148
17 Mapoly0098s0021 [PF09446] VMA21-like domain; [PTHR31792] FAMILY NOT NAMED19.440.7078
18 Mapoly0059s0058 [PF01541] GIY-YIG catalytic domain; [PTHR20208] FAMILY NOT NAMED19.970.7072
19 Mapoly0020s0092 [PF04133] Vacuolar protein sorting 55; [PTHR12050:SF0] SUBFAMILY NOT NAMED; [KOG2174] Leptin receptor gene-related protein; [PTHR12050] LEPTIN RECEPTOR-RELATED21.450.7036
20 Mapoly0108s0064 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding23.690.7111
21 Mapoly0124s0029 [PF03966] Trm112p-like protein23.750.6574
22 Mapoly0003s0045 [KOG2887] Membrane protein involved in ER to Golgi transport; [GO:0016192] vesicle-mediated transport; [PTHR23137] UNCHARACTERIZED; [GO:0016021] integral to membrane; [GO:0006810] transport; [PF04178] Got1/Sft2-like family23.870.6820
23 Mapoly0085s0073 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation24.980.6658
24 Mapoly0032s0047 [PTHR11614] PHOSPHOLIPASE-RELATED; [KOG1455] Lysophospholipase; [PF12695] Alpha/beta hydrolase family25.510.6817
25 Mapoly0118s0004 [PF14770] Transmembrane protein 18; [PTHR22593] FAMILY NOT NAMED26.830.6972
26 Mapoly0051s0044 -28.390.7170
27 Mapoly0004s0017 -29.120.7131
28 Mapoly0096s0036 [KOG4178] Soluble epoxide hydrolase; [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family33.170.5649
29 Mapoly0043s0076 [GO:0003676] nucleic acid binding; [PF01844] HNH endonuclease; [GO:0004519] endonuclease activity33.820.6216
30 Mapoly0066s0028 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain34.900.7162
31 Mapoly0005s0063 [GO:0006406] mRNA export from nucleus; [GO:0000124] SAGA complex; [GO:0005643] nuclear pore; [GO:0045893] positive regulation of transcription, DNA-dependent; [PF10163] Transcription factor e(y)2; [KOG4479] Transcription factor e(y)2; [K11368] enhancer of yellow 2 transcription factor; [PTHR12514:SF1] ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR; [GO:0003713] transcription coactivator activity; [PTHR12514] ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR35.210.6651
32 Mapoly0010s0195 [KOG4214] Myotrophin and similar proteins; [PTHR24188] ANKYRIN REPEAT PROTEIN; [PF12796] Ankyrin repeats (3 copies)36.820.7217
33 Mapoly0103s0047 [KOG0427] Ubiquitin conjugating enzyme; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR24067:SF35] UBIQUITIN-CONJUGATING ENZYME E2 W; [K10688] ubiquitin-conjugating enzyme E2 W [EC:6.3.2.19]; [PF00179] Ubiquitin-conjugating enzyme38.670.7009
34 Mapoly0025s0102 [PF07264] Etoposide-induced protein 2.4 (EI24); [KOG3966] p53-mediated apoptosis protein EI24/PIG8; [K10134] etoposide-induced 2.4 mRNA; [PTHR21389] P53 INDUCED PROTEIN; [PTHR21389:SF0] SUBFAMILY NOT NAMED39.230.6476
35 Mapoly0064s0006 [K03858] phosphatidylinositol glycan, class H; [KOG4551] GPI-GlcNAc transferase complex, PIG-H component, involved in glycosylphosphatidylinositol anchor biosynthesis; [PF10181] GPI-GlcNAc transferase complex, PIG-H component; [PTHR15231] PHOSPHATIDYLINOSITOL GLYCAN, CLASS H; [GO:0017176] phosphatidylinositol N-acetylglucosaminyltransferase activity39.890.6627
36 Mapoly0061s0139 [PTHR13420:SF0] SUBFAMILY NOT NAMED; [KOG3276] Uncharacterized conserved protein, contains YggU domain; [K09131] hypothetical protein; [PTHR13420] UNCHARACTERIZED; [PF02594] Uncharacterised ACR, YggU family COG187242.050.6928
37 Mapoly0049s0134 -42.850.6722
38 Mapoly0129s0019 [GO:0005737] cytoplasm; [PTHR11933] TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE; [PF03054] tRNA methyl transferase; [GO:0008033] tRNA processing; [GO:0016740] transferase activity; [2.8.1.-] Sulfurtransferases.; [K00566] tRNA-specific 2-thiouridylase [EC:2.8.1.-]; [KOG2805] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase43.500.6229
39 Mapoly0067s0084 [PTHR15967] UNCHARACTERIZED; [PF10238] E2F-associated phosphoprotein47.730.6738
40 Mapoly0010s0050 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006470] protein dephosphorylation; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity48.220.5892
41 Mapoly0001s0458 [KOG1743] Ferric reductase-like proteins; [GO:0016192] vesicle-mediated transport; [PTHR21493] CGI-141-RELATED/LIPASE CONTAINING PROTEIN; [PF04178] Got1/Sft2-like family49.190.6590
42 Mapoly0122s0047 [PTHR18829:SF0] SUBFAMILY NOT NAMED; [PTHR18829] FAMILY NOT NAMED; [PF09811] Essential protein Yae1, N terminal49.360.6820
43 Mapoly0061s0021 [KOG3978] Predicted membrane protein; [PF10268] Predicted transmembrane protein 161AB49.700.6161
44 Mapoly0052s0120 [K06664] peroxin-2; [PTHR12590:SF3] SUBFAMILY NOT NAMED; [KOG2879] Predicted E3 ubiquitin ligase; [PF04757] Pex2 / Pex12 amino terminal region; [PTHR12590] PEROXISOMAL PROTEIN RELATED51.580.6670
45 Mapoly0001s0548 [PF06155] Protein of unknown function (DUF971)52.540.6352
46 Mapoly0005s0190 [PF06969] HemN C-terminal domain; [PF04055] Radical SAM superfamily; [1.3.99.22] Coproporphyrinogen dehydrogenase.; [PTHR13932] COPROPORPHYRINIGEN III OXIDASE; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [K02495] oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]54.680.6577
47 Mapoly0113s0017 [K06170] presenilin enhancer 2; [KOG3402] Predicted membrane protein; [PTHR16318] GAMMA-SECRETASE SUBUNIT PEN-2; [PF10251] Presenilin enhancer-2 subunit of gamma secretase56.600.5797
48 Mapoly0068s0002 [GO:0003676] nucleic acid binding; [PF01844] HNH endonuclease; [GO:0004519] endonuclease activity58.960.7025
49 Mapoly0057s0044 [PF13902] R3H-associated N-terminal domain59.770.6312
50 Mapoly0019s0110 -60.420.6542
Showing 1 to 50 of 200 records
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