Guide Gene

Gene ID
Mapoly0129s0019
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005737] cytoplasm; [PTHR11933] TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE; [PF03054] tRNA methyl transferase; [GO:0008033] tRNA processing; [GO:0016740] transferase activity; [2.8.1.-] Sulfurtransferases.; [K00566] tRNA-specific 2-thiouridylase [EC:2.8.1.-]; [KOG2805] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0129s0019 [GO:0005737] cytoplasm; [PTHR11933] TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE; [PF03054] tRNA methyl transferase; [GO:0008033] tRNA processing; [GO:0016740] transferase activity; [2.8.1.-] Sulfurtransferases.; [K00566] tRNA-specific 2-thiouridylase [EC:2.8.1.-]; [KOG2805] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 0.00 1.0000
1 Mapoly0007s0151 [PF05768] Glutaredoxin-like domain (DUF836)1.000.7607
2 Mapoly0188s0014 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0750] Mitochondrial solute carrier protein4.900.7314
3 Mapoly0090s0037 [PTHR15561:SF0] SUBFAMILY NOT NAMED; [KOG4168] Predicted RNA polymerase III subunit C17; [PTHR15561] CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN; [PF03874] RNA polymerase Rpb4; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity6.320.7096
4 Mapoly0026s0005 [PTHR13291] JOSEPHIN 1, 2; [PF02099] Josephin; [GO:0008242] omega peptidase activity; [KOG2934] Uncharacterized conserved protein, contains Josephin domain8.000.6828
5 Mapoly0085s0073 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation8.770.6846
6 Mapoly0012s0147 [PTHR21617] UNCHARACTERIZED; [PTHR21617:SF0] SUBFAMILY NOT NAMED; [PF01423] LSM domain9.000.6771
7 Mapoly0051s0108 [PF11152] Protein of unknown function (DUF2930)9.800.7171
8 Mapoly0202s0015 -13.040.6417
9 Mapoly0008s0040 [GO:0016020] membrane; [PF01569] PAP2 superfamily; [KOG3146] Dolichyl pyrophosphate phosphatase and related acid phosphatases; [PTHR11247] PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1; [GO:0003824] catalytic activity14.070.6664
10 Mapoly0097s0056 -19.620.6975
11 Mapoly0154s0026 [PTHR15955] RWD DOMAIN CONTAINING PROTEIN 2; [PF06544] Protein of unknown function (DUF1115)23.980.6223
12 Mapoly0062s0062 [KOG2382] Predicted alpha/beta hydrolase; [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family24.120.6946
13 Mapoly0003s0045 [KOG2887] Membrane protein involved in ER to Golgi transport; [GO:0016192] vesicle-mediated transport; [PTHR23137] UNCHARACTERIZED; [GO:0016021] integral to membrane; [GO:0006810] transport; [PF04178] Got1/Sft2-like family24.250.6465
14 Mapoly0073s0024 [PF10914] Protein of unknown function (DUF2781); [PTHR31204] FAMILY NOT NAMED24.980.5908
15 Mapoly0006s0297 [KOG3377] Uncharacterized conserved protein; [PF05811] Eukaryotic protein of unknown function (DUF842); [PTHR21096] UNCHARACTERIZED25.300.6423
16 Mapoly0023s0018 -27.220.6369
17 Mapoly0135s0030 -27.930.6691
18 Mapoly0008s0269 -29.000.6052
19 Mapoly0015s0072 -32.860.6443
20 Mapoly0108s0064 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding34.210.6597
21 Mapoly0059s0024 -34.290.6085
22 Mapoly0027s0128 [GO:0006260] DNA replication; [PTHR10302] SINGLE-STRANDED DNA-BINDING PROTEIN; [GO:0003697] single-stranded DNA binding; [PTHR10302:SF0] SINGLE-STRANDED DNA-BINDING PROTEIN; [PF00436] Single-strand binding protein family37.790.6628
23 Mapoly0069s0014 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin38.170.6034
24 Mapoly0042s0122 [K03609] septum site-determining protein MinD; [PTHR13696:SF1] SUBFAMILY NOT NAMED; [KOG3022] Predicted ATPase, nucleotide-binding; [PTHR13696] FAMILY NOT NAMED; [PF01656] CobQ/CobB/MinD/ParA nucleotide binding domain40.000.6029
25 Mapoly0126s0033 -42.660.5647
26 Mapoly0007s0150 [PTHR12806:SF0] SUBFAMILY NOT NAMED; [K12188] ESCRT-II complex subunit VPS22; [PF04157] EAP30/Vps36 family; [KOG3341] RNA polymerase II transcription factor complex subunit; [PTHR12806] EAP30 SUBUNIT OF ELL COMPLEX43.500.6229
27 Mapoly0027s0008 [GO:0005515] protein binding; [KOG0280] Uncharacterized conserved protein; [PTHR22850] WD40 REPEAT FAMILY; [PF00400] WD domain, G-beta repeat43.710.5975
28 Mapoly0027s0037 -44.600.5838
29 Mapoly0005s0190 [PF06969] HemN C-terminal domain; [PF04055] Radical SAM superfamily; [1.3.99.22] Coproporphyrinogen dehydrogenase.; [PTHR13932] COPROPORPHYRINIGEN III OXIDASE; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [K02495] oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]45.130.6262
30 Mapoly0028s0033 [KOG1575] Voltage-gated shaker-like K+ channel, subunit beta/KCNAB; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family47.750.5973
31 Mapoly0004s0230 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PTHR13355] GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE; [PTHR13355:SF2] gb def: acetyltransferase (gnat) family [caenorhabditis elegans]48.000.5715
32 Mapoly0146s0032 -48.060.5806
33 Mapoly0007s0250 [K01934] 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]; [KOG4410] 5-formyltetrahydrofolate cyclo-ligase; [PF01812] 5-formyltetrahydrofolate cyclo-ligase family; [PTHR13017:SF0] SUBFAMILY NOT NAMED; [6.3.3.2] 5-formyltetrahydrofolate cyclo-ligase.; [PTHR13017] 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED48.500.5543
34 Mapoly0061s0136 [PTHR11807] ATPASES OF THE PP SUPERFAMILY-RELATED; [PF01171] PP-loop family50.080.5795
35 Mapoly0124s0029 [PF03966] Trm112p-like protein50.960.5906
36 Mapoly0108s0061 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [PTHR24282] FAMILY NOT NAMED; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PF00067] Cytochrome P45052.480.6024
37 Mapoly0033s0037 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006470] protein dephosphorylation; [KOG1716] Dual specificity phosphatase; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity55.820.6001
38 Mapoly0075s0082 -57.450.5703
39 Mapoly0007s0246 [PTHR14911] FAMILY NOT NAMED; [PF01170] Putative RNA methylase family UPF002057.860.6389
40 Mapoly0041s0080 [PTHR24003] MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED; [KOG1330] Sugar transporter/spinster transmembrane protein; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily58.960.5568
41 Mapoly0059s0058 [PF01541] GIY-YIG catalytic domain; [PTHR20208] FAMILY NOT NAMED59.500.6042
42 Mapoly0136s0033 -59.600.6186
43 Mapoly0156s0023 [PF07103] Protein of unknown function (DUF1365)64.340.5932
44 Mapoly0034s0026 [PF01903] CbiX; [GO:0016852] sirohydrochlorin cobaltochelatase activity; [GO:0009236] cobalamin biosynthetic process65.450.5964
45 Mapoly0057s0044 [PF13902] R3H-associated N-terminal domain66.410.5938
46 Mapoly0098s0021 [PF09446] VMA21-like domain; [PTHR31792] FAMILY NOT NAMED68.930.6009
47 Mapoly0132s0009 -70.530.6163
48 Mapoly0065s0016 [GO:0005515] protein binding; [PF00023] Ankyrin repeat; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN72.000.5809
49 Mapoly0162s0009 [GO:0009058] biosynthetic process; [GO:0030170] pyridoxal phosphate binding; [KOG0257] Kynurenine aminotransferase, glutamine transaminase K; [PF00155] Aminotransferase class I and II; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED74.470.5353
50 Mapoly0034s0092 [K00390] phosphoadenosine phosphosulfate reductase [EC:1.8.4.8]; [PTHR23293:SF4] gb def: FAD synthetase (EC 2.7.7.2) (FMN adenylyltransferase) (FAD pyrophosphorylase) (F; [KOG0189] Phosphoadenosine phosphosulfate reductase; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [1.8.4.8] Phosphoadenylyl-sulfate reductase (thioredoxin).; [PF01507] Phosphoadenosine phosphosulfate reductase family; [PTHR23293] FAD SYNTHETASE-RELATED (FMN ADENYLYLTRANSFERASE)77.180.6002
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