Guide Gene

Gene ID
Mapoly0001s0443
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0007264] small GTPase mediated signal transduction; [K07890] Ras-related protein Rab-21; [PTHR24073] FAMILY NOT NAMED; [KOG0088] GTPase Rab21, small G protein superfamily; [PF00071] Ras family; [GO:0005525] GTP binding; [PTHR24073:SF8] SUBFAMILY NOT NAMED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0001s0443 [GO:0007264] small GTPase mediated signal transduction; [K07890] Ras-related protein Rab-21; [PTHR24073] FAMILY NOT NAMED; [KOG0088] GTPase Rab21, small G protein superfamily; [PF00071] Ras family; [GO:0005525] GTP binding; [PTHR24073:SF8] SUBFAMILY NOT NAMED 0.00 1.0000
1 Mapoly0036s0053 [KOG3355] Mitochondrial sulfhydryl oxidase involved in the biogenesis of cytosolic Fe/S proteins; [GO:0016972] thiol oxidase activity; [GO:0055114] oxidation-reduction process; [PTHR12645] ALR/ERV; [PF04777] Erv1 / Alr family1.000.8725
2 Mapoly0016s0028 [K13118] protein DGCR14; [KOG2627] Nuclear protein ES2; [PTHR12940] ES-2 PROTEIN - RELATED; [PF09751] Nuclear protein Es21.730.8550
3 Mapoly0008s0157 [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [K03875] F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2); [PF00646] F-box domain2.240.8451
4 Mapoly0001s0234 [PTHR21230] VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED; [KOG3251] Golgi SNAP receptor complex member; [K08496] golgi SNAP receptor complex member 2; [PF12352] Snare region anchored in the vesicle membrane C-terminus; [PTHR21230:SF1] MEMBRIN4.240.8602
5 Mapoly0005s0123 [K13506] glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]; [PTHR23063:SF2] ACYLTRANSFERASE-LIKE PROTEIN 4; [PTHR23063] ACETYLTRANSFERASE-RELATED; [PF01553] Acyltransferase; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [2.3.1.15] Glycerol-3-phosphate 1-O-acyltransferase.; [KOG2898] Predicted phosphate acyltransferase, contains PlsC domain4.900.8259
6 Mapoly0066s0028 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain5.200.8291
7 Mapoly0042s0034 [PTHR23131:SF0] SUBFAMILY NOT NAMED; [KOG0813] Glyoxylase; [PF00753] Metallo-beta-lactamase superfamily; [PTHR23131] METALLO-BETA-LACTAMASE RELATED6.000.8453
8 Mapoly0104s0023 [PTHR23354] NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED; [PTHR23354:SF5] NUCLEOLAR PROTEIN-RELATED; [KOG2372] Oxidation resistance protein; [PF07534] TLD6.930.8050
9 Mapoly0010s0195 [KOG4214] Myotrophin and similar proteins; [PTHR24188] ANKYRIN REPEAT PROTEIN; [PF12796] Ankyrin repeats (3 copies)8.370.8221
10 Mapoly0013s0056 [KOG0937] Adaptor complexes medium subunit family; [GO:0016192] vesicle-mediated transport; [PTHR11998:SF13] CLATHRIN COAT ASSEMBLY PROTEIN AP-4; [GO:0005515] protein binding; [PTHR11998] CLATHRIN COAT ASSEMBLY PROTEIN; [PF00928] Adaptor complexes medium subunit family; [GO:0030131] clathrin adaptor complex; [K12402] AP-4 complex subunit mu-1; [GO:0006886] intracellular protein transport8.490.7601
11 Mapoly0120s0007 [PF04734] Neutral/alkaline non-lysosomal ceramidase; [PTHR12670:SF1] gb def: hypothetical protein rv0669c [mycobacterium tuberculosis h37rv]; [PTHR12670] CERAMIDASE; [KOG2232] Ceramidases8.940.8139
12 Mapoly0117s0006 [GO:0006950] response to stress; [PF00582] Universal stress protein family; [PTHR31964] FAMILY NOT NAMED10.390.8011
13 Mapoly0003s0017 [K00819] ornithine--oxo-acid transaminase [EC:2.6.1.13]; [PTHR11986] AMINOTRANSFERASE CLASS III; [KOG1402] Ornithine aminotransferase; [GO:0030170] pyridoxal phosphate binding; [2.6.1.13] Ornithine aminotransferase.; [PTHR11986:SF18] ORNITHINE AMINOTRANSFERASE; [GO:0008483] transaminase activity; [PF00202] Aminotransferase class-III10.680.8122
14 Mapoly0022s0044 -10.950.7969
15 Mapoly0022s0095 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR22952] CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED; [PF00170] bZIP transcription factor11.310.7630
16 Mapoly0035s0135 [PF13833] EF-hand domain pair11.400.8287
17 Mapoly0083s0036 [PF15054] Domain of unknown function (DUF4535)12.120.8348
18 Mapoly0032s0155 [KOG1390] Acetyl-CoA acetyltransferase; [PTHR18919] ACETYL-COA C-ACYLTRANSFERASE; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [PF00108] Thiolase, N-terminal domain; [GO:0008152] metabolic process; [PF02803] Thiolase, C-terminal domain12.250.8181
19 Mapoly0103s0050 [GO:0005524] ATP binding; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23074] AAA ATPASE; [KOG0740] AAA+-type ATPase; [PF04212] MIT (microtubule interacting and transport) domain13.270.8268
20 Mapoly0005s0224 [3.2.2.21] DNA-3-methyladenine glycosylase II.; [GO:0006284] base-excision repair; [KOG1918] 3-methyladenine DNA glycosidase; [PTHR10242] N-GLYCOSYLASE/DNA LYASE; [PF00730] HhH-GPD superfamily base excision DNA repair protein; [K01247] DNA-3-methyladenine glycosylase II [EC:3.2.2.21]; [PTHR10242:SF0] N-GLYCOSYLASE/DNA LYASE13.420.8348
21 Mapoly0004s0017 -14.320.7864
22 Mapoly0003s0242 [PF02713] Domain of unknown function DUF220; [PTHR31385] FAMILY NOT NAMED14.730.7944
23 Mapoly0006s0011 -15.300.7873
24 Mapoly0023s0020 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [PF01255] Putative undecaprenyl diphosphate synthase; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR10291] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE; [K11778] cis-prenyltransferase, dehydrodolichyl diphosphate synthase [EC:2.5.1.-]; [PTHR10291:SF0] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE15.750.8335
25 Mapoly0015s0082 [PF01713] Smr domain; [PTHR13308] UNCHARACTERIZED; [PF08590] Domain of unknown function (DUF1771)15.970.8129
26 Mapoly0061s0128 [GO:0008270] zinc ion binding; [KOG1609] Protein involved in mRNA turnover and stability; [PF12906] RING-variant domain; [PTHR23012] MEMBRANE ASSOCIATED RING FINGER17.610.7652
27 Mapoly0043s0006 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain18.250.7881
28 Mapoly0015s0071 [KOG2337] Ubiquitin activating E1 enzyme-like protein; [GO:0005737] cytoplasm; [K08337] autophagy-related protein 7; [GO:0006914] autophagy; [PF00899] ThiF family; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [GO:0003824] catalytic activity; [PTHR10953:SF3] AUTOPHAGY-RELATED PROTEIN 7 (APG7-LIKE)(UBIQUITIN-ACTIVATING ENZYME E1-LIKE PROTEIN)20.050.7612
29 Mapoly0154s0023 -20.490.8103
30 Mapoly0006s0234 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG3949] RNA polymerase II elongator complex, subunit ELP4; [PTHR12896:SF1] gb def: elongator protein 4, 50kd subunit, elp4p [saccharomyces cerevisiae]; [PTHR12896] PAX6 NEIGHBOR PROTEIN (PAXNEB); [PF05625] PAXNEB protein; [GO:0033588] Elongator holoenzyme complex; [K11375] elongator complex protein 420.980.7497
31 Mapoly0012s0148 -21.000.8091
32 Mapoly0009s0208 [K01265] methionyl aminopeptidase [EC:3.4.11.18]; [PTHR10804:SF9] METHIONINE AMINOPEPTIDASE 2; [GO:0008235] metalloexopeptidase activity; [3.4.11.18] Methionyl aminopeptidase.; [KOG2775] Metallopeptidase; [GO:0004177] aminopeptidase activity; [PF00557] Metallopeptidase family M24; [GO:0006508] proteolysis; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P)21.170.7943
33 Mapoly0049s0134 -21.490.7618
34 Mapoly0058s0027 [PF03878] YIF1; [KOG3094] Predicted membrane protein; [PTHR14083] YIP1 INTERACTING FACTOR HOMOLOG (YIF1 PROTEIN)22.140.7915
35 Mapoly0069s0031 [PTHR13073] GCN5-RELATED; [PTHR13073:SF0] SUBFAMILY NOT NAMED; [KOG3390] General control of amino-acid synthesis 5-like 1; [PF06320] GCN5-like protein 1 (GCN5L1)22.450.7646
36 Mapoly0006s0109 [PTHR12791] GOLGI SNARE BET1-RELATED; [K08505] protein transport protein SFT1; [GO:0005515] protein binding; [KOG3385] V-SNARE; [PF05739] SNARE domain23.490.7607
37 Mapoly1163s0001 [GO:0016020] membrane; [GO:0004222] metalloendopeptidase activity; [GO:0008233] peptidase activity; [GO:0071586] CAAX-box protein processing; [PF01435] Peptidase family M48; [PTHR10120] CAAX PRENYL PROTEASE 1; [GO:0006508] proteolysis24.250.7834
38 Mapoly0147s0030 [PTHR30602] AMINO-ACID ACETYLTRANSFERASE; [2.3.1.1] Amino-acid N-acetyltransferase.; [K14682] amino-acid N-acetyltransferase [EC:2.3.1.1]; [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PF00696] Amino acid kinase family; [KOG2436] Acetylglutamate kinase/acetylglutamate synthase25.480.7675
39 Mapoly0149s0010 -26.150.8128
40 Mapoly0058s0071 [PF09753] Membrane fusion protein Use126.830.7894
41 Mapoly0103s0047 [KOG0427] Ubiquitin conjugating enzyme; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR24067:SF35] UBIQUITIN-CONJUGATING ENZYME E2 W; [K10688] ubiquitin-conjugating enzyme E2 W [EC:6.3.2.19]; [PF00179] Ubiquitin-conjugating enzyme27.220.7689
42 Mapoly0043s0125 [PF13855] Leucine rich repeat; [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR23155] LEUCINE-RICH REPEAT-CONTAINING PROTEIN28.840.8016
43 Mapoly0061s0139 [PTHR13420:SF0] SUBFAMILY NOT NAMED; [KOG3276] Uncharacterized conserved protein, contains YggU domain; [K09131] hypothetical protein; [PTHR13420] UNCHARACTERIZED; [PF02594] Uncharacterised ACR, YggU family COG187229.150.7518
44 Mapoly0165s0018 [PF13414] TPR repeat; [PTHR21581] D-ALANYL-D-ALANINE CARBOXYPEPTIDASE29.290.7244
45 Mapoly0005s0173 -29.510.8231
46 Mapoly0148s0024 [PTHR12499:SF0] SUBFAMILY NOT NAMED; [PTHR12499] OPTIC ATROPHY 3 PROTEIN (OPA3); [PF07047] Optic atrophy 3 protein (OPA3); [KOG3335] Predicted coiled-coil protein29.560.8062
47 Mapoly0020s0141 [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT30.760.8076
48 Mapoly0122s0047 [PTHR18829:SF0] SUBFAMILY NOT NAMED; [PTHR18829] FAMILY NOT NAMED; [PF09811] Essential protein Yae1, N terminal31.430.7588
49 Mapoly0047s0037 [PTHR13299] UNCHARACTERIZED; [PTHR13299:SF0] SUBFAMILY NOT NAMED; [KOG4546] Peroxisomal biogenesis protein (peroxin 16); [K13335] peroxin-16; [PF08610] Peroxisomal membrane protein (Pex16)31.750.7239
50 Mapoly0133s0009 [PTHR11679:SF3] VACUOLAR PROTEIN SORTING-ASSOCIATED; [GO:0006904] vesicle docking involved in exocytosis; [GO:0016192] vesicle-mediated transport; [PTHR11679] VESICLE PROTEIN SORTING-ASSOCIATED; [KOG1299] Vacuolar sorting protein VPS45/Stt10 (Sec1 family); [PF00995] Sec1 family32.530.7778
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