Guide Gene

Gene ID
Mapoly0148s0024
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR12499:SF0] SUBFAMILY NOT NAMED; [PTHR12499] OPTIC ATROPHY 3 PROTEIN (OPA3); [PF07047] Optic atrophy 3 protein (OPA3); [KOG3335] Predicted coiled-coil protein

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0148s0024 [PTHR12499:SF0] SUBFAMILY NOT NAMED; [PTHR12499] OPTIC ATROPHY 3 PROTEIN (OPA3); [PF07047] Optic atrophy 3 protein (OPA3); [KOG3335] Predicted coiled-coil protein 0.00 1.0000
1 Mapoly0016s0169 -2.000.8793
2 Mapoly0083s0036 [PF15054] Domain of unknown function (DUF4535)2.000.8806
3 Mapoly0015s0144 -3.870.8642
4 Mapoly0149s0010 -5.480.8613
5 Mapoly0005s0132 [GO:0006511] ubiquitin-dependent protein catabolic process; [KOG1816] Ubiquitin fusion-degradation protein; [PTHR12555] UBIQUITIN FUSION DEGRADATON PROTEIN 1; [PF03152] Ubiquitin fusion degradation protein UFD16.000.8647
6 Mapoly0075s0079 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [KOG0058] Peptide exporter, ABC superfamily; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter6.320.8644
7 Mapoly0105s0044 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding6.630.8463
8 Mapoly0058s0055 [PF06244] Protein of unknown function (DUF1014); [PTHR21680:SF0] SUBFAMILY NOT NAMED; [KOG3223] Uncharacterized conserved protein; [PTHR21680] UNCHARACTERIZED7.750.8414
9 Mapoly0066s0028 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain9.590.8224
10 Mapoly0038s0011 [PF06803] Protein of unknown function (DUF1232); [PTHR22894] UNCHARACTERIZED10.950.8244
11 Mapoly0054s0070 [PF01428] AN1-like Zinc finger; [PTHR14677] ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED; [GO:0008270] zinc ion binding12.330.8561
12 Mapoly0001s0246 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN13.560.7992
13 Mapoly0025s0100 [PTHR13124] 39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED; [KOG4548] Mitochondrial ribosomal protein L17; [PF11788] 39S mitochondrial ribosomal protein L4613.750.8521
14 Mapoly0108s0065 [KOG1432] Predicted DNA repair exonuclease SIA1; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [PTHR32440:SF0] SUBFAMILY NOT NAMED; [PTHR32440] FAMILY NOT NAMED14.000.8408
15 Mapoly0051s0044 -14.490.8043
16 Mapoly0008s0002 [PF05755] Rubber elongation factor protein (REF)15.000.8385
17 Mapoly0085s0088 [PF03656] Pam16; [GO:0005744] mitochondrial inner membrane presequence translocase complex; [PTHR12388] MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE; [KOG3442] Uncharacterized conserved protein; [GO:0030150] protein import into mitochondrial matrix15.300.8182
18 Mapoly0034s0109 [GO:0006396] RNA processing; [KOG3833] Uncharacterized conserved protein, contains RtcB domain; [PTHR11118] UNCHARACTERIZED; [PF01139] tRNA-splicing ligase RtcB; [GO:0008452] RNA ligase activity15.430.8309
19 Mapoly0144s0014 [K01613] phosphatidylserine decarboxylase [EC:4.1.1.65]; [PTHR10067] PHOSPHATIDYLSERINE DECARBOXYLASE; [GO:0008654] phospholipid biosynthetic process; [4.1.1.65] Phosphatidylserine decarboxylase.; [GO:0004609] phosphatidylserine decarboxylase activity; [PF02666] Phosphatidylserine decarboxylase; [KOG2420] Phosphatidylserine decarboxylase16.940.8565
20 Mapoly0032s0155 [KOG1390] Acetyl-CoA acetyltransferase; [PTHR18919] ACETYL-COA C-ACYLTRANSFERASE; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [PF00108] Thiolase, N-terminal domain; [GO:0008152] metabolic process; [PF02803] Thiolase, C-terminal domain18.000.8173
21 Mapoly0005s0224 [3.2.2.21] DNA-3-methyladenine glycosylase II.; [GO:0006284] base-excision repair; [KOG1918] 3-methyladenine DNA glycosidase; [PTHR10242] N-GLYCOSYLASE/DNA LYASE; [PF00730] HhH-GPD superfamily base excision DNA repair protein; [K01247] DNA-3-methyladenine glycosylase II [EC:3.2.2.21]; [PTHR10242:SF0] N-GLYCOSYLASE/DNA LYASE18.380.8409
22 Mapoly0061s0084 [KOG2632] Rhomboid family proteins; [3.4.21.-] Serine endopeptidases.; [PTHR22790] RHOMBOID-RELATED; [GO:0016021] integral to membrane; [GO:0008270] zinc ion binding; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PF00641] Zn-finger in Ran binding protein and others; [K09651] rhomboid domain-containing protein 1 [EC:3.4.21.-]; [PTHR22790:SF7] RHOMBOID-RELATED18.570.7823
23 Mapoly0226s0002 [PTHR12763] UNCHARACTERIZED; [PF00226] DnaJ domain; [KOG0723] Molecular chaperone (DnaJ superfamily)18.970.8136
24 Mapoly0005s0246 [PF07712] Stress up-regulated Nod 1919.290.7667
25 Mapoly0001s0178 [PF00782] Dual specificity phosphatase, catalytic domain; [K05766] slingshot; [GO:0006470] protein dephosphorylation; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity19.440.8252
26 Mapoly0047s0046 [KOG2740] Clathrin-associated protein medium chain; [GO:0016192] vesicle-mediated transport; [K12398] AP-3 complex subunit mu; [GO:0005515] protein binding; [PTHR11998] CLATHRIN COAT ASSEMBLY PROTEIN; [PF00928] Adaptor complexes medium subunit family; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [PTHR11998:SF4] CLATHRIN COAT ADAPTOR AP3 MEDIUM CHAIN19.490.8483
27 Mapoly0178s0004 [GO:0005515] protein binding; [PF00646] F-box domain20.400.8351
28 Mapoly0044s0111 [PF02698] DUF218 domain21.490.8112
29 Mapoly0007s0291 -22.000.8225
30 Mapoly0031s0035 [PTHR22731] RIBONUCLEASE P/MRP SUBUNIT22.720.8006
31 Mapoly0001s0080 [PF00415] Regulator of chromosome condensation (RCC1) repeat; [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF13540] Regulator of chromosome condensation (RCC1) repeat; [PTHR22870:SF26] UVB-RESISTANCE PROTEIN UVR8-RELATED; [KOG1427] Uncharacterized conserved protein, contains RCC1 domain22.800.8050
32 Mapoly0006s0136 [PTHR24007] BRCA1-ASSOCIATED PROTEIN; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [6.3.2.19] Ubiquitin--protein ligase.; [K10632] BRCA1-associated protein [EC:6.3.2.19]; [KOG0804] Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein); [PF02148] Zn-finger in ubiquitin-hydrolases and other protein; [PF07576] BRCA1-associated protein 222.910.8190
33 Mapoly0050s0128 [PTHR16222] ADP-RIBOSYLGLYCOHYDROLASE; [PF03747] ADP-ribosylglycohydrolase24.560.7827
34 Mapoly0130s0019 [GO:0005737] cytoplasm; [PF02544] 3-oxo-5-alpha-steroid 4-dehydrogenase; [GO:0016021] integral to membrane; [GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors; [PTHR14624] DFG10 PROTEIN; [KOG1640] Predicted steroid reductase; [GO:0006629] lipid metabolic process26.380.8140
35 Mapoly0041s0072 [PF03803] Scramblase; [PTHR23248] PHOSPHOLIPID SCRAMBLASE-RELATED26.460.8167
36 Mapoly0093s0036 [PTHR21622] COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4; [PTHR21622:SF0] SUBFAMILY NOT NAMED; [KOG4149] Uncharacterized conserved protein26.740.7915
37 Mapoly0013s0098 [K05982] deoxyribonuclease V [EC:3.1.21.7]; [KOG4417] Predicted endonuclease; [3.1.21.7] Deoxyribonuclease V.; [PF04493] Endonuclease V; [GO:0006281] DNA repair; [GO:0004519] endonuclease activity28.460.7742
38 Mapoly0319s0001 [PF03094] Mlo family; [GO:0016021] integral to membrane; [GO:0006952] defense response28.460.7937
39 Mapoly0057s0009 -28.570.8076
40 Mapoly0001s0443 [GO:0007264] small GTPase mediated signal transduction; [K07890] Ras-related protein Rab-21; [PTHR24073] FAMILY NOT NAMED; [KOG0088] GTPase Rab21, small G protein superfamily; [PF00071] Ras family; [GO:0005525] GTP binding; [PTHR24073:SF8] SUBFAMILY NOT NAMED29.560.8062
41 Mapoly0001s0234 [PTHR21230] VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED; [KOG3251] Golgi SNAP receptor complex member; [K08496] golgi SNAP receptor complex member 2; [PF12352] Snare region anchored in the vesicle membrane C-terminus; [PTHR21230:SF1] MEMBRIN30.590.8194
42 Mapoly1495s0001 [GO:0032324] molybdopterin cofactor biosynthetic process; [GO:0006777] Mo-molybdopterin cofactor biosynthetic process; [PF03454] MoeA C-terminal region (domain IV); [PF00994] Probable molybdopterin binding domain; [PTHR10192] MOLYBDOPTERIN BIOSYNTHESIS PROTEIN; [PF03453] MoeA N-terminal region (domain I and II); [KOG2371] Molybdopterin biosynthesis protein; [K03750] molybdopterin biosynthesis protein MoeA30.980.7980
43 Mapoly0012s0016 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [PF01255] Putative undecaprenyl diphosphate synthase; [KOG1602] Cis-prenyltransferase; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR10291] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE; [K11778] cis-prenyltransferase, dehydrodolichyl diphosphate synthase [EC:2.5.1.-]31.220.7790
44 Mapoly0044s0101 [KOG1296] Uncharacterized conserved protein; [PF05907] Eukaryotic protein of unknown function (DUF866); [PTHR12857] UNCHARACTERIZED; [PTHR12857:SF0] SUBFAMILY NOT NAMED31.780.7636
45 Mapoly0072s0039 [PF13855] Leucine rich repeat; [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE32.120.7281
46 Mapoly0009s0095 [GO:0055114] oxidation-reduction process; [PTHR31803] FAMILY NOT NAMED; [PF01786] Alternative oxidase; [K00540] formate acetyltransferase activating enzyme [EC:1.97.1.4]; [1.-.-.-] Oxidoreductases.; [GO:0009916] alternative oxidase activity32.860.8068
47 Mapoly0020s0159 -33.290.6948
48 Mapoly0038s0094 -33.630.8054
49 Mapoly0012s0148 -34.210.7994
50 Mapoly0005s0173 -34.320.8251
Showing 1 to 50 of 200 records
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