Guide Gene

Gene ID
Mapoly0061s0084
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG2632] Rhomboid family proteins; [3.4.21.-] Serine endopeptidases.; [PTHR22790] RHOMBOID-RELATED; [GO:0016021] integral to membrane; [GO:0008270] zinc ion binding; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PF00641] Zn-finger in Ran binding protein and others; [K09651] rhomboid domain-containing protein 1 [EC:3.4.21.-]; [PTHR22790:SF7] RHOMBOID-RELATED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0061s0084 [KOG2632] Rhomboid family proteins; [3.4.21.-] Serine endopeptidases.; [PTHR22790] RHOMBOID-RELATED; [GO:0016021] integral to membrane; [GO:0008270] zinc ion binding; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PF00641] Zn-finger in Ran binding protein and others; [K09651] rhomboid domain-containing protein 1 [EC:3.4.21.-]; [PTHR22790:SF7] RHOMBOID-RELATED 0.00 1.0000
1 Mapoly0226s0002 [PTHR12763] UNCHARACTERIZED; [PF00226] DnaJ domain; [KOG0723] Molecular chaperone (DnaJ superfamily)3.320.8148
2 Mapoly0033s0007 -9.540.7798
3 Mapoly0105s0012 [PF01381] Helix-turn-helix; [GO:0043565] sequence-specific DNA binding; [K03627] putative transcription factor; [KOG3398] Transcription factor MBF1; [PTHR10245] ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 (MULTIPROTEIN BRIDGING FACTOR 1); [PF08523] Multiprotein bridging factor 110.580.7785
4 Mapoly0033s0008 [PF13405] EF-hand domain; [PTHR10891] EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN; [PF00036] EF hand; [GO:0005509] calcium ion binding; [KOG0027] Calmodulin and related proteins (EF-Hand superfamily)12.410.7600
5 Mapoly0054s0070 [PF01428] AN1-like Zinc finger; [PTHR14677] ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED; [GO:0008270] zinc ion binding13.640.7995
6 Mapoly0015s0173 [PF02361] Cobalt transport protein14.490.7653
7 Mapoly0124s0057 -15.100.7373
8 Mapoly0016s0169 -18.410.7944
9 Mapoly0148s0024 [PTHR12499:SF0] SUBFAMILY NOT NAMED; [PTHR12499] OPTIC ATROPHY 3 PROTEIN (OPA3); [PF07047] Optic atrophy 3 protein (OPA3); [KOG3335] Predicted coiled-coil protein18.570.7823
10 Mapoly0038s0094 -19.130.7811
11 Mapoly0005s0132 [GO:0006511] ubiquitin-dependent protein catabolic process; [KOG1816] Ubiquitin fusion-degradation protein; [PTHR12555] UBIQUITIN FUSION DEGRADATON PROTEIN 1; [PF03152] Ubiquitin fusion degradation protein UFD121.350.7844
12 Mapoly0093s0039 -24.660.6086
13 Mapoly0040s0052 [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [PTHR22753:SF1] SUBFAMILY NOT NAMED; [PTHR22753] FAMILY NOT NAMED; [PF03982] Diacylglycerol acyltransferase; [PF12697] Alpha/beta hydrolase family25.980.7301
14 Mapoly0060s0068 [KOG0610] Putative serine/threonine protein kinase; [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24351] RIBOSOMAL PROTEIN S6 KINASE29.510.7587
15 Mapoly0103s0069 -31.940.6750
16 Mapoly0058s0055 [PF06244] Protein of unknown function (DUF1014); [PTHR21680:SF0] SUBFAMILY NOT NAMED; [KOG3223] Uncharacterized conserved protein; [PTHR21680] UNCHARACTERIZED32.630.7530
17 Mapoly0015s0144 -35.100.7491
18 Mapoly0089s0049 [PTHR10072] IRON-SULFUR CLUSTER ASSEMBLY PROTEIN; [KOG1120] Fe-S cluster biosynthesis protein ISA1 (contains a HesB-like domain); [K13628] iron-sulfur cluster assembly protein; [PF01521] Iron-sulphur cluster biosynthesis37.470.7290
19 Mapoly0029s0064 [PTHR23350] PEROXISOME ASSEMBLY PROTEIN 10; [K13346] peroxin-10; [GO:0005515] protein binding; [KOG0317] Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [GO:0016558] protein import into peroxisome matrix; [GO:0007031] peroxisome organization; [PF04757] Pex2 / Pex12 amino terminal region; [GO:0005779] integral to peroxisomal membrane38.460.7260
20 Mapoly0036s0137 -39.050.7019
21 Mapoly0108s0021 [PF03097] BRO1-like domain; [PTHR23030] PCD6 INTERACTING PROTEIN-RELATED40.300.7565
22 Mapoly0178s0004 [GO:0005515] protein binding; [PF00646] F-box domain43.270.7654
23 Mapoly0001s0080 [PF00415] Regulator of chromosome condensation (RCC1) repeat; [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF13540] Regulator of chromosome condensation (RCC1) repeat; [PTHR22870:SF26] UVB-RESISTANCE PROTEIN UVR8-RELATED; [KOG1427] Uncharacterized conserved protein, contains RCC1 domain46.040.7372
24 Mapoly0027s0025 [GO:0046983] protein dimerization activity; [PTHR11800:SF2] DNA-DIRECTED RNA POLYMERASE II SUBUNIT 3; [PF01000] RNA polymerase Rpb3/RpoA insert domain; [KOG1522] RNA polymerase II, subunit POLR2C/RPB3; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [K03011] DNA-directed RNA polymerase II subunit RPB3; [PTHR11800] DNA-DIRECTED RNA POLYMERASE; [PF01193] RNA polymerase Rpb3/Rpb11 dimerisation domain47.240.7599
25 Mapoly0129s0050 [PTHR11922] GMP SYNTHASE-RELATED; [PTHR11922:SF1] ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE49.300.7409
26 Mapoly0015s0049 [PF09353] Domain of unknown function (DUF1995)49.500.7194
27 Mapoly0152s0013 [PTHR11601] CYSTEINE DESULFURYLASE; [GO:0008152] metabolic process; [KOG1549] Cysteine desulfurase NFS1; [PF00266] Aminotransferase class-V50.300.6667
28 Mapoly0108s0065 [KOG1432] Predicted DNA repair exonuclease SIA1; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [PTHR32440:SF0] SUBFAMILY NOT NAMED; [PTHR32440] FAMILY NOT NAMED50.330.7470
29 Mapoly0093s0036 [PTHR21622] COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4; [PTHR21622:SF0] SUBFAMILY NOT NAMED; [KOG4149] Uncharacterized conserved protein52.310.7186
30 Mapoly0034s0109 [GO:0006396] RNA processing; [KOG3833] Uncharacterized conserved protein, contains RtcB domain; [PTHR11118] UNCHARACTERIZED; [PF01139] tRNA-splicing ligase RtcB; [GO:0008452] RNA ligase activity53.890.7310
31 Mapoly0029s0044 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED59.290.6786
32 Mapoly0065s0071 [PF03127] GAT domain; [GO:0005622] intracellular; [GO:0006886] intracellular protein transport; [PF00790] VHS domain; [PTHR13856] VHS DOMAIN CONTAINING PROTEIN FAMILY59.510.7344
33 Mapoly0002s0201 [K01267] aspartyl aminopeptidase [EC:3.4.11.21]; [GO:0004177] aminopeptidase activity; [PF02127] Aminopeptidase I zinc metalloprotease (M18); [GO:0008270] zinc ion binding; [KOG2596] Aminopeptidase I zinc metalloprotease (M18); [3.4.11.21] Aspartyl aminopeptidase.; [GO:0006508] proteolysis63.290.6168
34 Mapoly0045s0146 [KOG3591] Alpha crystallins; [PTHR11527] SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY; [PF00011] Hsp20/alpha crystallin family66.000.6763
35 Mapoly0079s0003 [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [PTHR11863:SF3] SUR2 HYDROXYLASE/DESATURASE; [GO:0006633] fatty acid biosynthetic process; [GO:0016491] oxidoreductase activity; [PF04116] Fatty acid hydroxylase superfamily; [PTHR11863] STEROL DESATURASE; [KOG0874] Sphingolipid hydroxylase66.410.7165
36 Mapoly0081s0061 [KOG0454] 3-isopropylmalate dehydratase (aconitase superfamily); [4.2.1.35] (R)-2-methylmalate dehydratase.; [4.2.1.33] 3-isopropylmalate dehydratase.; [K01703] 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]; [GO:0008152] metabolic process; [PTHR11670] ACONITASE; [PF00330] Aconitase family (aconitate hydratase)69.500.7317
37 Mapoly0089s0045 [KOG3350] Uncharacterized conserved protein; [PF10237] Probable N6-adenine methyltransferase69.640.7081
38 Mapoly0059s0030 [KOG1575] Voltage-gated shaker-like K+ channel, subunit beta/KCNAB; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family70.010.7171
39 Mapoly0020s0117 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG1947] Leucine rich repeat proteins, some proteins contain F-box74.030.7370
40 Mapoly0004s0042 [PF01471] Putative peptidoglycan binding domain; [PTHR15852] FAMILY NOT NAMED77.460.7132
41 Mapoly0066s0022 [GO:0016020] membrane; [PTHR11384] ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER; [GO:0005524] ATP binding; [KOG0060] Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis); [PF06472] ABC transporter transmembrane region 2; [GO:0016887] ATPase activity; [GO:0006810] transport; [PTHR11384:SF3] ATP-BINDING CASSETTE, SUB-FAMILY D, MEMBER 4 (PEROXISOMAL MEMBRANE PROTEIN 69); [PF00005] ABC transporter78.120.7277
42 Mapoly0002s0332 [KOG2367] Alpha-isopropylmalate synthase/homocitrate synthase; [PF00682] HMGL-like; [2.3.3.13] 2-isopropylmalate synthase.; [GO:0003852] 2-isopropylmalate synthase activity; [K01649] 2-isopropylmalate synthase [EC:2.3.3.13]; [GO:0009098] leucine biosynthetic process; [PTHR10277] HOMOCITRATE SYNTHASE-RELATED; [PTHR10277:SF9] 2-ISOPROPYLMALATE SYNTHASE; [PF08502] LeuA allosteric (dimerisation) domain; [GO:0003824] catalytic activity80.070.7263
43 Mapoly0064s0089 [KOG1234] ABC (ATP binding cassette) 1 protein; [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [K08869] aarF domain-containing kinase80.680.6945
44 Mapoly0083s0036 [PF15054] Domain of unknown function (DUF4535)83.850.7185
45 Mapoly0046s0019 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [KOG3396] Glucosamine-phosphate N-acetyltransferase; [PTHR13355] GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE; [K00621] glucosamine-phosphate N-acetyltransferase [EC:2.3.1.4]; [2.3.1.4] Glucosamine-phosphate N-acetyltransferase.85.080.6531
46 Mapoly0007s0157 [4.2.2.2] Pectate lyase.; [K01728] pectate lyase [EC:4.2.2.2]; [PF00544] Pectate lyase; [PTHR31683] FAMILY NOT NAMED87.090.7243
47 Mapoly0037s0014 [GO:0005524] ATP binding; [KOG0055] Multidrug/pheromone exporter, ABC superfamily; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter87.400.7184
48 Mapoly0165s0002 [GO:0005524] ATP binding; [PTHR19229] ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A (ABCA); [GO:0016887] ATPase activity; [KOG0059] Lipid exporter ABCA1 and related proteins, ABC superfamily; [PF12698] ABC-2 family transporter protein; [PF00005] ABC transporter90.830.7258
49 Mapoly0053s0005 [PTHR22731] RIBONUCLEASE P/MRP SUBUNIT; [PF05057] Putative serine esterase (DUF676)91.070.7048
50 Mapoly0140s0002 -95.030.7179
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