Guide Gene

Gene ID
Mapoly0006s0109
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR12791] GOLGI SNARE BET1-RELATED; [K08505] protein transport protein SFT1; [GO:0005515] protein binding; [KOG3385] V-SNARE; [PF05739] SNARE domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0006s0109 [PTHR12791] GOLGI SNARE BET1-RELATED; [K08505] protein transport protein SFT1; [GO:0005515] protein binding; [KOG3385] V-SNARE; [PF05739] SNARE domain 0.00 1.0000
1 Mapoly0117s0006 [GO:0006950] response to stress; [PF00582] Universal stress protein family; [PTHR31964] FAMILY NOT NAMED6.320.7712
2 Mapoly0001s0233 [PTHR12385:SF14] CHOLINE TRANSPORTER-LIKE PROTEIN 2 (SOLUTE CARRIER FAMILY 44 MEMBER 2) SOURCE:U; [KOG1362] Choline transporter-like protein; [PF04515] Plasma-membrane choline transporter; [PTHR12385] CTL TRANSPORTER12.410.7831
3 Mapoly0033s0018 [K00207] dihydropyrimidine dehydrogenase (NADP+) [EC:1.3.1.2]; [PTHR11938] FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE; [1.3.1.2] Dihydropyrimidine dehydrogenase (NADP(+)).; [GO:0055114] oxidation-reduction process; [KOG1799] Dihydropyrimidine dehydrogenase; [PF01180] Dihydroorotate dehydrogenase; [GO:0004152] dihydroorotate dehydrogenase activity; [GO:0006222] UMP biosynthetic process12.410.6846
4 Mapoly0001s0507 -14.660.7686
5 Mapoly0036s0053 [KOG3355] Mitochondrial sulfhydryl oxidase involved in the biogenesis of cytosolic Fe/S proteins; [GO:0016972] thiol oxidase activity; [GO:0055114] oxidation-reduction process; [PTHR12645] ALR/ERV; [PF04777] Erv1 / Alr family15.870.7652
6 Mapoly0126s0021 [PF04046] PSP; [K13128] zinc finger CCHC domain-containing protein 8; [PTHR13316] ZINC FINGER, CCHC DOMAIN CONTAINING 818.410.7767
7 Mapoly0005s0173 -18.600.7778
8 Mapoly0003s0017 [K00819] ornithine--oxo-acid transaminase [EC:2.6.1.13]; [PTHR11986] AMINOTRANSFERASE CLASS III; [KOG1402] Ornithine aminotransferase; [GO:0030170] pyridoxal phosphate binding; [2.6.1.13] Ornithine aminotransferase.; [PTHR11986:SF18] ORNITHINE AMINOTRANSFERASE; [GO:0008483] transaminase activity; [PF00202] Aminotransferase class-III18.710.7473
9 Mapoly0015s0170 [GO:0005515] protein binding; [PF07648] Kazal-type serine protease inhibitor domain19.080.7225
10 Mapoly0127s0018 [GO:0006801] superoxide metabolic process; [KOG4656] Copper chaperone for superoxide dismutase; [PF00080] Copper/zinc superoxide dismutase (SODC); [GO:0030001] metal ion transport; [GO:0055114] oxidation-reduction process; [PTHR10003] SUPEROXIDE DISMUTASE [CU-ZN]-RELATED; [PF00403] Heavy-metal-associated domain; [GO:0046872] metal ion binding21.910.7151
11 Mapoly0001s0443 [GO:0007264] small GTPase mediated signal transduction; [K07890] Ras-related protein Rab-21; [PTHR24073] FAMILY NOT NAMED; [KOG0088] GTPase Rab21, small G protein superfamily; [PF00071] Ras family; [GO:0005525] GTP binding; [PTHR24073:SF8] SUBFAMILY NOT NAMED23.490.7607
12 Mapoly0009s0090 [PTHR31509] FAMILY NOT NAMED24.390.7401
13 Mapoly0020s0147 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG0315] G-protein beta subunit-like protein (contains WD40 repeats); [PF00400] WD domain, G-beta repeat25.920.7672
14 Mapoly0022s0095 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR22952] CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED; [PF00170] bZIP transcription factor29.290.7149
15 Mapoly0040s0107 -30.000.7463
16 Mapoly0008s0002 [PF05755] Rubber elongation factor protein (REF)35.110.7598
17 Mapoly0038s0011 [PF06803] Protein of unknown function (DUF1232); [PTHR22894] UNCHARACTERIZED37.750.7339
18 Mapoly0188s0002 [PF04525] Tubby C 2; [PTHR31087] FAMILY NOT NAMED38.680.7470
19 Mapoly0148s0024 [PTHR12499:SF0] SUBFAMILY NOT NAMED; [PTHR12499] OPTIC ATROPHY 3 PROTEIN (OPA3); [PF07047] Optic atrophy 3 protein (OPA3); [KOG3335] Predicted coiled-coil protein42.660.7447
20 Mapoly0027s0077 -44.500.7335
21 Mapoly0005s0142 [PTHR22603] CHOLINE/ETHANOALAMINE KINASE; [KOG2686] Choline kinase; [PF01633] Choline/ethanolamine kinase47.240.7371
22 Mapoly0149s0010 -48.510.7462
23 Mapoly0058s0027 [PF03878] YIF1; [KOG3094] Predicted membrane protein; [PTHR14083] YIP1 INTERACTING FACTOR HOMOLOG (YIF1 PROTEIN)50.080.7119
24 Mapoly0006s0178 [GO:0005783] endoplasmic reticulum; [PF05529] B-cell receptor-associated protein 31-like; [GO:0016021] integral to membrane; [PTHR12701] BCR-ASSOCIATED PROTEIN, BAP; [GO:0006886] intracellular protein transport50.350.7436
25 Mapoly0032s0155 [KOG1390] Acetyl-CoA acetyltransferase; [PTHR18919] ACETYL-COA C-ACYLTRANSFERASE; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [PF00108] Thiolase, N-terminal domain; [GO:0008152] metabolic process; [PF02803] Thiolase, C-terminal domain53.240.7313
26 Mapoly0166s0007 [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [PF13504] Leucine rich repeat53.240.7134
27 Mapoly0022s0044 -53.670.7052
28 Mapoly0014s0181 [PTHR16224] FAMILY NOT NAMED; [PF07258] HCaRG protein; [PTHR16224:SF0] SUBFAMILY NOT NAMED54.090.6340
29 Mapoly0023s0041 [PTHR11699:SF65] PREDICTED: SIMILAR TO ALDEHYDE DEHYDROGENASE 9 FAMILY, MEMBER A1, PARTIAL; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PTHR11699] ALDEHYDE DEHYDROGENASE-RELATED; [KOG2450] Aldehyde dehydrogenase; [PF00171] Aldehyde dehydrogenase family57.750.6549
30 Mapoly0025s0082 [KOG2641] Predicted seven transmembrane receptor - rhodopsin family; [PTHR23423] ORGANIC SOLUTE TRANSPORTER-RELATED; [PF03619] Organic solute transporter Ostalpha58.500.7191
31 Mapoly0118s0013 [PTHR31808] FAMILY NOT NAMED; [PF05542] Protein of unknown function (DUF760)59.510.7065
32 Mapoly0008s0157 [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [K03875] F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2); [PF00646] F-box domain63.500.7084
33 Mapoly0036s0117 -63.620.6900
34 Mapoly0081s0017 [PF08045] Cell division control protein 14, SIN component63.870.7264
35 Mapoly0001s0511 -67.730.6581
36 Mapoly0042s0034 [PTHR23131:SF0] SUBFAMILY NOT NAMED; [KOG0813] Glyoxylase; [PF00753] Metallo-beta-lactamase superfamily; [PTHR23131] METALLO-BETA-LACTAMASE RELATED68.920.7257
37 Mapoly0007s0046 [PF00504] Chlorophyll A-B binding protein69.460.6899
38 Mapoly0147s0019 [PTHR13247] TETRATRICOPEPTIDE REPEAT PROTEIN 11 (TPR REPEAT PROTEIN 11); [PTHR13247:SF0] SUBFAMILY NOT NAMED; [GO:0000266] mitochondrial fission; [KOG3364] Membrane protein involved in organellar division; [PF14853] Fis1 C-terminal tetratricopeptide repeat; [PF14852] Fis1 N-terminal tetratricopeptide repeat69.660.7274
39 Mapoly0026s0027 [GO:0005737] cytoplasm; [PTHR21485] CMP-N-ACETYLNEURAMINIC ACID SYNTHASE; [K00979] 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]; [PF02348] Cytidylyltransferase; [PTHR21485:SF4] CMP-2-KETO-3-DEOCTULOSONATE (CMP-KDO) CYTIDYLTRANSFERASE; [2.7.7.38] 3-deoxy-manno-octulosonate cytidylyltransferase.; [GO:0008690] 3-deoxy-manno-octulosonate cytidylyltransferase activity; [GO:0009103] lipopolysaccharide biosynthetic process71.020.7021
40 Mapoly0001s0179 [PTHR10835] SQUALENE MONOOXYGENASE; [PF13450] NAD(P)-binding Rossmann-like domain; [1.14.99.7] Transferred entry: 1.14.13.132.; [GO:0050660] flavin adenine dinucleotide binding; [KOG1298] Squalene monooxygenase; [GO:0055114] oxidation-reduction process; [PF08491] Squalene epoxidase; [GO:0016021] integral to membrane; [K00511] squalene monooxygenase [EC:1.14.99.7]; [GO:0004506] squalene monooxygenase activity72.360.7277
41 Mapoly0073s0040 [PTHR15907] FAMILY NOT NAMED; [PF04749] PLAC8 family73.890.7236
42 Mapoly0006s0234 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG3949] RNA polymerase II elongator complex, subunit ELP4; [PTHR12896:SF1] gb def: elongator protein 4, 50kd subunit, elp4p [saccharomyces cerevisiae]; [PTHR12896] PAX6 NEIGHBOR PROTEIN (PAXNEB); [PF05625] PAXNEB protein; [GO:0033588] Elongator holoenzyme complex; [K11375] elongator complex protein 475.270.6717
43 Mapoly0081s0058 [GO:0005515] protein binding; [PTHR23153] UBX-RELATED; [PF09409] PUB domain; [PF00789] UBX domain; [K14011] UBX domain-containing protein 675.300.7186
44 Mapoly0144s0014 [K01613] phosphatidylserine decarboxylase [EC:4.1.1.65]; [PTHR10067] PHOSPHATIDYLSERINE DECARBOXYLASE; [GO:0008654] phospholipid biosynthetic process; [4.1.1.65] Phosphatidylserine decarboxylase.; [GO:0004609] phosphatidylserine decarboxylase activity; [PF02666] Phosphatidylserine decarboxylase; [KOG2420] Phosphatidylserine decarboxylase75.790.7404
45 Mapoly0009s0208 [K01265] methionyl aminopeptidase [EC:3.4.11.18]; [PTHR10804:SF9] METHIONINE AMINOPEPTIDASE 2; [GO:0008235] metalloexopeptidase activity; [3.4.11.18] Methionyl aminopeptidase.; [KOG2775] Metallopeptidase; [GO:0004177] aminopeptidase activity; [PF00557] Metallopeptidase family M24; [GO:0006508] proteolysis; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P)76.250.7147
46 Mapoly0013s0098 [K05982] deoxyribonuclease V [EC:3.1.21.7]; [KOG4417] Predicted endonuclease; [3.1.21.7] Deoxyribonuclease V.; [PF04493] Endonuclease V; [GO:0006281] DNA repair; [GO:0004519] endonuclease activity76.290.6980
47 Mapoly0076s0096 [PTHR32133] FAMILY NOT NAMED; [PF12937] F-box-like; [GO:0005515] protein binding77.180.7124
48 Mapoly0043s0142 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE77.720.7100
49 Mapoly0049s0134 -78.460.6706
50 Mapoly0019s0039 [K01409] O-sialoglycoprotein endopeptidase [EC:3.4.24.57]; [PF00814] Glycoprotease family; [KOG2707] Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold); [PTHR11735] O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; [3.4.24.57] O-sialoglycoprotein endopeptidase.79.690.7029
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