Guide Gene

Gene ID
Mapoly0003s0036
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
-

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0003s0036 - 0.00 1.0000
1 Mapoly0001s0293 [PTHR23106] FAMILY NOT NAMED; [PF01585] G-patch domain; [GO:0003676] nucleic acid binding1.730.7726
2 Mapoly0014s0114 [KOG2061] Uncharacterized MYND Zn-finger protein; [PF04194] Programmed cell death protein 2, C-terminal putative domain; [GO:0005737] cytoplasm; [PTHR12298] PCDC2 (PROGRAMMED CELL DEATH PROTEIN 2)-RELATED5.100.7563
3 Mapoly0108s0064 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding6.240.7473
4 Mapoly0161s0032 [PTHR18895] METHYLTRANSFERASE; [PF06325] Ribosomal protein L11 methyltransferase (PrmA); [GO:0005737] cytoplasm; [GO:0006479] protein methylation; [GO:0008276] protein methyltransferase activity; [PTHR18895:SF3] RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE (L11 MTASE)6.930.6944
5 Mapoly0029s0084 -7.000.7208
6 Mapoly0093s0007 [GO:0016020] membrane; [GO:0008137] NADH dehydrogenase (ubiquinone) activity; [PTHR12910] NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2; [GO:0009055] electron carrier activity; [PF05071] NADH ubiquinone oxidoreductase subunit NDUFA12; [PTHR12910:SF1] NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.28.940.6850
7 Mapoly0004s0017 -9.380.7452
8 Mapoly0030s0134 [GO:0006378] mRNA polyadenylation; [GO:0005849] mRNA cleavage factor complex; [PF13869] Nucleotide hydrolase; [GO:0003729] mRNA binding; [PTHR13047] PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT10.580.7132
9 Mapoly0051s0007 [PF06047] Ras-induced vulval development antagonist; [KOG2812] Uncharacterized conserved protein; [PTHR13087] NF-KAPPA B ACTIVATING PROTEIN13.860.6701
10 Mapoly0057s0040 [PTHR21493] CGI-141-RELATED/LIPASE CONTAINING PROTEIN; [PF01764] Lipase (class 3); [GO:0006629] lipid metabolic process17.150.6403
11 Mapoly0006s0234 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG3949] RNA polymerase II elongator complex, subunit ELP4; [PTHR12896:SF1] gb def: elongator protein 4, 50kd subunit, elp4p [saccharomyces cerevisiae]; [PTHR12896] PAX6 NEIGHBOR PROTEIN (PAXNEB); [PF05625] PAXNEB protein; [GO:0033588] Elongator holoenzyme complex; [K11375] elongator complex protein 419.420.6921
12 Mapoly0123s0021 [PTHR15367:SF2] gb def: ENSANGP00000011763 (Fragment); [PF11705] DNA-directed RNA polymerase III subunit Rpc31; [PTHR15367] DNA-DIRECTED RNA POLYMERASE III20.000.6427
13 Mapoly0111s0002 [K12848] U4/U6.U5 tri-snRNP component SNU23; [PF12874] Zinc-finger of C2H2 type; [PTHR23067] DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN; [KOG4727] U1-like Zn-finger protein20.490.6774
14 Mapoly0027s0129 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain21.330.6469
15 Mapoly0104s0023 [PTHR23354] NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED; [PTHR23354:SF5] NUCLEOLAR PROTEIN-RELATED; [KOG2372] Oxidation resistance protein; [PF07534] TLD21.420.7042
16 Mapoly0016s0028 [K13118] protein DGCR14; [KOG2627] Nuclear protein ES2; [PTHR12940] ES-2 PROTEIN - RELATED; [PF09751] Nuclear protein Es222.180.7216
17 Mapoly0010s0195 [KOG4214] Myotrophin and similar proteins; [PTHR24188] ANKYRIN REPEAT PROTEIN; [PF12796] Ankyrin repeats (3 copies)23.450.7232
18 Mapoly0027s0072 [PF13716] Divergent CRAL/TRIO domain; [KOG2633] Hismacro and SEC14 domain-containing proteins; [PTHR11106] GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED23.450.6726
19 Mapoly0015s0032 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN24.820.6899
20 Mapoly0184s0013 -24.980.6313
21 Mapoly0019s0131 [PTHR23111] ZINC FINGER PROTEIN; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others27.170.5950
22 Mapoly0168s0005 [PTHR14255:SF4] SUBFAMILY NOT NAMED; [PTHR14255] ATP-DEPENDENT PROTEASE (CEREBLON); [KOG1400] Predicted ATP-dependent protease PIL, contains LON domain; [GO:0004176] ATP-dependent peptidase activity; [K11793] cereblon; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis28.640.6426
23 Mapoly0050s0018 [PTHR14467] ARV1; [KOG3134] Predicted membrane protein; [PF04161] Arv1-like family29.390.6489
24 Mapoly0041s0080 [PTHR24003] MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED; [KOG1330] Sugar transporter/spinster transmembrane protein; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily29.950.6110
25 Mapoly0166s0009 [PF10158] Tumour suppressor protein30.000.6378
26 Mapoly0033s0037 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006470] protein dephosphorylation; [KOG1716] Dual specificity phosphatase; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity31.400.6560
27 Mapoly0019s0035 [KOG1605] TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation); [PTHR32054] FAMILY NOT NAMED; [PTHR32054:SF0] SUBFAMILY NOT NAMED; [PF03031] NLI interacting factor-like phosphatase; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [K01090] protein phosphatase [EC:3.1.3.16]; [3.1.3.16] Phosphoprotein phosphatase.33.410.5879
28 Mapoly0036s0155 [PF11510] Fanconi Anaemia group E protein FANCE; [PTHR32094] FAMILY NOT NAMED35.070.6997
29 Mapoly0080s0036 -35.710.6841
30 Mapoly0067s0098 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase38.960.6134
31 Mapoly0023s0060 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0004000] adenosine deaminase activity; [PTHR10910] EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN; [PF02137] Adenosine-deaminase (editase) domain39.470.6784
32 Mapoly0165s0018 [PF13414] TPR repeat; [PTHR21581] D-ALANYL-D-ALANINE CARBOXYPEPTIDASE40.890.6453
33 Mapoly0009s0234 [PF12937] F-box-like; [GO:0005515] protein binding; [PTHR22844] F-BOX AND WD40 DOMAIN PROTEIN; [KOG0274] Cdc4 and related F-box and WD-40 proteins; [PF00400] WD domain, G-beta repeat42.720.6698
34 Mapoly0001s0471 [PTHR22936:SF2] gb def: Hypothetical protein; [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis44.000.6394
35 Mapoly0020s0030 [PF15346] Arginine and glutamate-rich 1; [PTHR31711] FAMILY NOT NAMED45.540.6478
36 Mapoly0015s0082 [PF01713] Smr domain; [PTHR13308] UNCHARACTERIZED; [PF08590] Domain of unknown function (DUF1771)47.020.6973
37 Mapoly0045s0122 [PTHR16039] FAMILY NOT NAMED; [PF15003] HAUS augmin-like complex subunit 2; [GO:0051225] spindle assembly; [GO:0031023] microtubule organizing center organization47.570.6085
38 Mapoly0056s0111 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR13581] MRG-BINDING PROTEIN; [PF07904] Chromatin modification-related protein EAF7; [GO:0043189] H4/H2A histone acetyltransferase complex; [GO:0005634] nucleus49.300.6660
39 Mapoly0052s0120 [K06664] peroxin-2; [PTHR12590:SF3] SUBFAMILY NOT NAMED; [KOG2879] Predicted E3 ubiquitin ligase; [PF04757] Pex2 / Pex12 amino terminal region; [PTHR12590] PEROXISOMAL PROTEIN RELATED49.640.6565
40 Mapoly0076s0086 -49.840.5894
41 Mapoly0035s0056 [KOG3374] Cellular repressor of transcription; [PTHR13343] CREG1 PROTEIN; [PF13883] Pyridoxamine 5'-phosphate oxidase51.060.5983
42 Mapoly0016s0052 [K10752] histone-binding protein RBBP4; [GO:0005515] protein binding; [KOG0264] Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1; [PTHR22850] WD40 REPEAT FAMILY; [PF12265] Histone-binding protein RBBP4 or subunit C of CAF1 complex; [PF00400] WD domain, G-beta repeat53.100.6192
43 Mapoly0005s0096 [GO:0006506] GPI anchor biosynthetic process; [PTHR15095] PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS, CLASS F; [GO:0016021] integral to membrane; [PF06699] GPI biosynthesis protein family Pig-F; [GO:0005789] endoplasmic reticulum membrane53.390.6519
44 Mapoly0060s0043 [PTHR12482] UNCHARACTERIZED; [PF05057] Putative serine esterase (DUF676); [KOG4372] Predicted alpha/beta hydrolase55.140.5578
45 Mapoly0009s0167 [PF12483] E3 Ubiquitin ligase; [KOG1571] Predicted E3 ubiquitin ligase; [GO:0004842] ubiquitin-protein ligase activity; [GO:0007005] mitochondrion organization; [PF13920] Zinc finger, C3HC4 type (RING finger); [PTHR12183] UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN55.560.6286
46 Mapoly0119s0058 [GO:0005515] protein binding; [KOG2570] SWI/SNF transcription activation complex subunit; [PF02201] SWIB/MDM2 domain; [K11650] SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D; [PTHR13844] BRG-1 ASSOCIATED FACTOR 60 (BAF60)55.860.6855
47 Mapoly0162s0009 [GO:0009058] biosynthetic process; [GO:0030170] pyridoxal phosphate binding; [KOG0257] Kynurenine aminotransferase, glutamine transaminase K; [PF00155] Aminotransferase class I and II; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED59.250.5706
48 Mapoly0175s0022 [KOG1361] Predicted hydrolase involved in interstrand cross-link repair; [PTHR23240] DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED; [PF12706] Beta-lactamase superfamily domain; [PF07522] DNA repair metallo-beta-lactamase60.790.5607
49 Mapoly0003s0174 -61.250.5745
50 Mapoly0102s0038 [KOG2091] Predicted member of glycosyl hydrolase family 18; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [PTHR11177] CHITINASE; [GO:0005975] carbohydrate metabolic process; [PF00704] Glycosyl hydrolases family 1861.970.5855
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