Guide Gene
- Gene ID
- Mapoly0067s0098
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0067s0098 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase 0.00 1.0000 1 Mapoly0136s0020 [PTHR23290] UNCHARACTERIZED; [PF13659] Methyltransferase domain; [KOG3420] Predicted RNA methylase; [K07579] putative methylase 1.00 0.7771 2 Mapoly0111s0002 [K12848] U4/U6.U5 tri-snRNP component SNU23; [PF12874] Zinc-finger of C2H2 type; [PTHR23067] DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN; [KOG4727] U1-like Zn-finger protein 4.00 0.7249 3 Mapoly0197s0015 - 6.32 0.6583 4 Mapoly0029s0084 - 8.72 0.6886 5 Mapoly0147s0011 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 9.11 0.5692 6 Mapoly0019s0042 [GO:0005515] protein binding; [PF02798] Glutathione S-transferase, N-terminal domain; [KOG0867] Glutathione S-transferase; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 14.07 0.6548 7 Mapoly0004s0017 - 15.68 0.6935 8 Mapoly0108s0064 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding 18.03 0.6791 9 Mapoly0162s0009 [GO:0009058] biosynthetic process; [GO:0030170] pyridoxal phosphate binding; [KOG0257] Kynurenine aminotransferase, glutamine transaminase K; [PF00155] Aminotransferase class I and II; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED 18.76 0.5955 10 Mapoly0068s0046 [KOG3416] Predicted nucleic acid binding protein; [PTHR13356] OB FOLD NUCLEIC ACID BINDING PROTEIN-RELATED 19.44 0.6475 11 Mapoly0093s0007 [GO:0016020] membrane; [GO:0008137] NADH dehydrogenase (ubiquinone) activity; [PTHR12910] NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2; [GO:0009055] electron carrier activity; [PF05071] NADH ubiquinone oxidoreductase subunit NDUFA12; [PTHR12910:SF1] NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2 19.97 0.6237 12 Mapoly0102s0013 [PTHR12262] UNCHARACTERIZED; [KOG3036] Protein involved in cell differentiation/sexual development; [PF04078] Cell differentiation family, Rcd1-like; [K12606] CCR4-NOT transcription complex subunit 9 21.63 0.6541 13 Mapoly0073s0074 [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068:SF4] SUBFAMILY NOT NAMED; [PTHR13068] CGI-12 PROTEIN-RELATED 21.98 0.5782 14 Mapoly0135s0030 - 22.14 0.6737 15 Mapoly0005s0020 [PF00929] Exonuclease; [PTHR23044] 3'-5' EXONUCLEASE ERI1-RELATED; [KOG0542] Predicted exonuclease 24.27 0.6056 16 Mapoly0033s0099 [PF00929] Exonuclease; [KOG2248] 3'-5' exonuclease; [PTHR12801:SF45] EXONUCLEASE; [PTHR12801] EXONUCLEASE 25.22 0.6739 17 Mapoly0004s0285 [GO:0016491] oxidoreductase activity; [PTHR24319] FAMILY NOT NAMED; [GO:0008152] metabolic process; [KOG1208] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); [PF00106] short chain dehydrogenase; [PTHR24319:SF0] SUBFAMILY NOT NAMED 28.86 0.5924 18 Mapoly0115s0037 [KOG4058] Uncharacterized conserved protein; [PF13659] Methyltransferase domain; [PTHR13610] UNCHARACTERIZED; [PTHR13610:SF2] SUBFAMILY NOT NAMED 30.66 0.6548 19 Mapoly0075s0019 [PF13661] 2OG-Fe(II) oxygenase superfamily; [PTHR14049] LEPRECAN 1 31.18 0.6026 20 Mapoly0156s0023 [PF07103] Protein of unknown function (DUF1365) 33.17 0.6244 21 Mapoly0116s0013 [PTHR13036:SF0] SUBFAMILY NOT NAMED; [K03842] beta-1,4-mannosyltransferase [EC:2.4.1.142]; [KOG2941] Beta-1,4-mannosyltransferase; [PF13692] Glycosyl transferases group 1; [PF13579] Glycosyl transferase 4-like domain; [PTHR13036] BETA1,4 MANNOSYLTRANSFERASE; [GO:0016757] transferase activity, transferring glycosyl groups; [2.4.1.142] Chitobiosyldiphosphodolichol beta-mannosyltransferase. 34.29 0.6131 22 Mapoly0147s0029 [PTHR21596] RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 36.99 0.6009 23 Mapoly0003s0036 - 38.96 0.6134 24 Mapoly0008s0143 [PF00149] Calcineurin-like phosphoesterase; [PF14008] Iron/zinc purple acid phosphatase-like protein C; [GO:0016787] hydrolase activity; [PTHR22953] ACID PHOSPHATASE RELATED; [KOG1378] Purple acid phosphatase 42.07 0.4694 25 Mapoly0122s0047 [PTHR18829:SF0] SUBFAMILY NOT NAMED; [PTHR18829] FAMILY NOT NAMED; [PF09811] Essential protein Yae1, N terminal 42.81 0.6492 26 Mapoly0013s0132 [PF04117] Mpv17 / PMP22 family; [GO:0016021] integral to membrane; [PTHR11266:SF7] 22 KDA PEROXISOMAL MEMBRANE PROTEIN; [PTHR11266] PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 (MPV17); [KOG1944] Peroxisomal membrane protein MPV17 and related proteins 45.06 0.5766 27 Mapoly0034s0013 [PF12631] Catalytic cysteine-containing C-terminus of GTPase, MnmE; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PTHR11649:SF32] GTP-BINDING PROTEIN ERA HOMOLOG (HERA)(ERA-W)(CONSERVED ERA-LIKE GTPASE)(CEGA) 50.67 0.6373 28 Mapoly0005s0096 [GO:0006506] GPI anchor biosynthetic process; [PTHR15095] PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS, CLASS F; [GO:0016021] integral to membrane; [PF06699] GPI biosynthesis protein family Pig-F; [GO:0005789] endoplasmic reticulum membrane 52.65 0.6258 29 Mapoly0096s0064 [GO:0005524] ATP binding; [PTHR24220] FAMILY NOT NAMED; [GO:0016887] ATPase activity; [PF00005] ABC transporter 54.74 0.6580 30 Mapoly0123s0021 [PTHR15367:SF2] gb def: ENSANGP00000011763 (Fragment); [PF11705] DNA-directed RNA polymerase III subunit Rpc31; [PTHR15367] DNA-DIRECTED RNA POLYMERASE III 56.44 0.5830 31 Mapoly0006s0297 [KOG3377] Uncharacterized conserved protein; [PF05811] Eukaryotic protein of unknown function (DUF842); [PTHR21096] UNCHARACTERIZED 57.97 0.5977 32 Mapoly0096s0043 [PF14968] Coiled coil protein 84; [PTHR31198] FAMILY NOT NAMED 58.38 0.6398 33 Mapoly0044s0012 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006289] nucleotide-excision repair; [PTHR12831] TRANSCRIPTION INITIATION FACTOR IIH (TFIIH), POLYPEPTIDE 3-RELATED; [PF03850] Transcription factor Tfb4; [K03143] transcription initiation factor TFIIH subunit 3; [KOG2487] RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB4; [PTHR12831:SF0] GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 3; [GO:0000439] core TFIIH complex 59.62 0.5953 34 Mapoly0099s0024 [KOG0266] WD40 repeat-containing protein; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat 61.92 0.5765 35 Mapoly0029s0123 [PTHR14269] CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED; [KOG1618] Predicted phosphatase; [PTHR14269:SF4] UNCHARACTERIZED; [PF13344] Haloacid dehalogenase-like hydrolase; [PF13242] HAD-hyrolase-like 62.08 0.5985 36 Mapoly0019s0035 [KOG1605] TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation); [PTHR32054] FAMILY NOT NAMED; [PTHR32054:SF0] SUBFAMILY NOT NAMED; [PF03031] NLI interacting factor-like phosphatase; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [K01090] protein phosphatase [EC:3.1.3.16]; [3.1.3.16] Phosphoprotein phosphatase. 63.19 0.5451 37 Mapoly0052s0120 [K06664] peroxin-2; [PTHR12590:SF3] SUBFAMILY NOT NAMED; [KOG2879] Predicted E3 ubiquitin ligase; [PF04757] Pex2 / Pex12 amino terminal region; [PTHR12590] PEROXISOMAL PROTEIN RELATED 63.64 0.6117 38 Mapoly0014s0047 [PTHR22602:SF0] SUBFAMILY NOT NAMED; [GO:0005737] cytoplasm; [PF08669] Glycine cleavage T-protein C-terminal barrel domain; [GO:0004047] aminomethyltransferase activity; [GO:0006546] glycine catabolic process; [PTHR22602] UNCHARACTERIZED; [K06980] ribosomal RNA large subunit methyltransferase F [EC:2.1.1.181]; [KOG2929] Transcription factor, component of CCR4 transcriptional complex; [PF01571] Aminomethyltransferase folate-binding domain 65.97 0.6053 39 Mapoly0459s0001 - 66.23 0.5905 40 Mapoly0021s0048 [KOG4539] Uncharacterized conserved protein; [PF10173] Mitochondrial K+-H+ exchange-related 66.93 0.6082 41 Mapoly0014s0178 [PF04654] Protein of unknown function, DUF599; [PTHR31168] FAMILY NOT NAMED 69.43 0.4975 42 Mapoly0100s0046 - 69.91 0.5950 43 Mapoly0019s0104 [GO:0003919] FMN adenylyltransferase activity; [PF06574] FAD synthetase; [GO:0009231] riboflavin biosynthetic process; [PTHR12714] PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASE 71.04 0.5870 44 Mapoly0001s0293 [PTHR23106] FAMILY NOT NAMED; [PF01585] G-patch domain; [GO:0003676] nucleic acid binding 71.48 0.6029 45 Mapoly0040s0029 [PTHR22840] FAMILY NOT NAMED; [GO:0005515] protein binding; [KOG2444] WD40 repeat protein; [PF00400] WD domain, G-beta repeat 71.64 0.5683 46 Mapoly0006s0234 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG3949] RNA polymerase II elongator complex, subunit ELP4; [PTHR12896:SF1] gb def: elongator protein 4, 50kd subunit, elp4p [saccharomyces cerevisiae]; [PTHR12896] PAX6 NEIGHBOR PROTEIN (PAXNEB); [PF05625] PAXNEB protein; [GO:0033588] Elongator holoenzyme complex; [K11375] elongator complex protein 4 72.85 0.6068 47 Mapoly0127s0038 [GO:0008080] N-acetyltransferase activity; [K00670] peptide alpha-N-acetyltransferase [EC:2.3.1.88]; [KOG3139] N-acetyltransferase; [PF00583] Acetyltransferase (GNAT) family; [2.3.1.88] Peptide alpha-N-acetyltransferase.; [PTHR23091] N-TERMINAL ACETYLTRANSFERASE 74.22 0.5550 48 Mapoly0084s0081 - 76.13 0.5387 49 Mapoly0061s0092 [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING 77.85 0.6064 50 Mapoly0007s0171 [PF04414] D-aminoacyl-tRNA deacylase; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0051499] D-aminoacyl-tRNA deacylase activity 78.99 0.5275