Guide Gene
- Gene ID
- Mapoly0033s0099
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF00929] Exonuclease; [KOG2248] 3'-5' exonuclease; [PTHR12801:SF45] EXONUCLEASE; [PTHR12801] EXONUCLEASE
Coexpressed Gene List
Search : Show :Showing 1 to 50 of 200 records
Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0033s0099 [PF00929] Exonuclease; [KOG2248] 3'-5' exonuclease; [PTHR12801:SF45] EXONUCLEASE; [PTHR12801] EXONUCLEASE 0.00 1.0000 1 Mapoly0135s0015 [GO:0003723] RNA binding; [PF02854] MIF4G domain; [GO:0005515] protein binding; [PTHR18034] CELL CYCLE CONTROL PROTEIN CWF22-RELATED; [PTHR18034:SF4] SGD1P; [KOG2141] Protein involved in high osmolarity signaling pathway; [PF02847] MA3 domain 2.00 0.8106 2 Mapoly0079s0016 [GO:0005515] protein binding; [KOG3881] Uncharacterized conserved protein; [PTHR16038] NOP SEVEN ASSOCIATED PROTEIN 1; [PTHR16038:SF4] SUBFAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat 4.00 0.8166 3 Mapoly0057s0058 [PF04032] RNAse P Rpr2/Rpp21/SNM1 subunit domain 4.47 0.7717 4 Mapoly0048s0059 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [KOG1802] RNA helicase nonsense mRNA reducing factor (pNORF1); [PF13086] AAA domain; [PF13087] AAA domain 6.32 0.7278 5 Mapoly0033s0164 [PTHR11246] PRE-MRNA SPLICING FACTOR; [PTHR11246:SF5] XPA-BINDING PROTEIN 2 (HCNP PROTEIN) 6.93 0.7452 6 Mapoly0002s0141 - 9.49 0.7906 7 Mapoly0006s0306 [GO:0005524] ATP binding; [PTHR22942] RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER; [GO:0003697] single-stranded DNA binding; [GO:0006281] DNA repair; [GO:0009432] SOS response; [PF00154] recA bacterial DNA recombination protein; [K03553] recombination protein RecA; [KOG1433] DNA repair protein RAD51/RHP55 10.95 0.7509 8 Mapoly0027s0150 [PF04031] Las1-like; [PTHR15002] UNCHARACTERIZED 12.17 0.6996 9 Mapoly0146s0011 [PTHR13387] FAMILY NOT NAMED; [PF04063] Domain of unknown function (DUF383); [KOG2973] Uncharacterized conserved protein; [PF04064] Domain of unknown function (DUF384) 12.96 0.7878 10 Mapoly0097s0057 [GO:0005515] protein binding; [PTHR10588] FAMILY NOT NAMED; [PF00560] Leucine Rich Repeat; [KOG1644] U2-associated snRNP A' protein; [PF12799] Leucine Rich repeats (2 copies) 14.39 0.8064 11 Mapoly0111s0002 [K12848] U4/U6.U5 tri-snRNP component SNU23; [PF12874] Zinc-finger of C2H2 type; [PTHR23067] DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN; [KOG4727] U1-like Zn-finger protein 14.90 0.7297 12 Mapoly0032s0043 [PF03725] 3' exoribonuclease family, domain 2; [PTHR11097:SF8] EXOSOME COMPLEX EXONUCLEASE RRP45 (POLYMYOSITIS/SCLERODERMA AUTOANTIGEN 1) (RIBOSOMAL RNA PROCESSING PROTEIN 45); [KOG1612] Exosomal 3'-5' exoribonuclease complex, subunit Rrp42; [PTHR11097] EXOSOME COMPLEX EXONUCLEASE (RIBOSOMAL RNA PROCESSING PROTEIN); [PF01138] 3' exoribonuclease family, domain 1; [K12589] exosome complex component RRP42 15.56 0.7707 13 Mapoly0111s0020 [PF13516] Leucine Rich repeat; [PTHR24106] FAMILY NOT NAMED; [KOG1909] Ran GTPase-activating protein; [PF13943] WPP domain; [K14319] Ran GTPase-activating protein 1 17.49 0.6755 14 Mapoly0012s0095 [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PF02810] SEC-C motif; [PF02338] OTU-like cysteine protease 17.55 0.7644 15 Mapoly0082s0056 [PTHR13211] UNCHARACTERIZED; [GO:0005515] protein binding; [KOG2919] Guanine nucleotide-binding protein; [PF00400] WD domain, G-beta repeat 17.97 0.7553 16 Mapoly0138s0006 [GO:0070985] TFIIK complex; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0016538] cyclin-dependent protein serine/threonine kinase regulator activity; [GO:0019901] protein kinase binding; [PTHR10026:SF8] CYCLIN H; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [KOG2496] Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit; [GO:0006351] transcription, DNA-dependent; [K06634] cyclin H; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity 18.49 0.7526 17 Mapoly0149s0015 [GO:0005524] ATP binding; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23077] AAA-FAMILY ATPASE; [KOG0730] AAA+-type ATPase 20.10 0.7978 18 Mapoly0115s0054 [KOG4709] Uncharacterized conserved protein; [PF09805] Nucleolar protein 12 (25kDa) 21.56 0.7938 19 Mapoly0023s0060 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0004000] adenosine deaminase activity; [PTHR10910] EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN; [PF02137] Adenosine-deaminase (editase) domain 24.37 0.7325 20 Mapoly0067s0098 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase 25.22 0.6739 21 Mapoly0090s0008 [GO:0003677] DNA binding; [PTHR12780:SF0] SUBFAMILY NOT NAMED; [K03025] DNA-directed RNA polymerase III subunit RPC6; [PF05158] RNA polymerase Rpc34 subunit; [GO:0006351] transcription, DNA-dependent; [PTHR12780] RNA POLYMERASE III (DNA DIRECTED), 39KD SUBUNIT-RELATED; [KOG3233] RNA polymerase III, subunit C34; [GO:0003899] DNA-directed RNA polymerase activity; [2.7.7.6] DNA-directed RNA polymerase. 28.62 0.7672 22 Mapoly0020s0167 [PF03725] 3' exoribonuclease family, domain 2; [KOG1068] Exosomal 3'-5' exoribonuclease complex, subunit Rrp41 and related exoribonucleases; [K11600] exosome complex component RRP41; [PTHR11953] RIBONUCLEASE PH RELATED; [PF01138] 3' exoribonuclease family, domain 1; [PTHR11953:SF0] SUBFAMILY NOT NAMED 30.59 0.7152 23 Mapoly0057s0032 [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [PTHR22807:SF4] WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN 20; [PF01189] NOL1/NOP2/sun family; [KOG2360] Proliferation-associated nucleolar protein (NOL1) 30.59 0.7841 24 Mapoly0218s0008 - 32.19 0.7381 25 Mapoly0048s0101 [PF00226] DnaJ domain; [GO:0006122] mitochondrial electron transport, ubiquinol to cytochrome c; [GO:0005740] mitochondrial envelope; [GO:0005750] mitochondrial respiratory chain complex III; [PTHR24077] FAMILY NOT NAMED; [PF05365] Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like 34.01 0.6880 26 Mapoly0099s0058 - 38.77 0.7755 27 Mapoly0058s0072 [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [PF01018] GTP1/OBG; [KOG1489] Predicted GTP-binding protein (ODN superfamily); [GO:0005525] GTP binding; [PTHR11702:SF21] GTP-BINDING PROTEIN 40.10 0.7706 28 Mapoly0025s0086 [KOG3800] Predicted E3 ubiquitin ligase containing RING finger, subunit of transcription/repair factor TFIIH and CDK-activating kinase assembly factor; [PF06391] CDK-activating kinase assembly factor MAT1; [GO:0005634] nucleus; [PTHR12683] FAMILY NOT NAMED; [K10842] CDK-activating kinase assembly factor MAT1; [GO:0007049] cell cycle 41.38 0.7553 29 Mapoly0029s0063 [PTHR20982:SF7] RIBOSOME RECYCLING FACTOR; [PTHR20982] RIBOSOME RECYCLING FACTOR; [KOG4759] Ribosome recycling factor; [PF01765] Ribosome recycling factor; [K02838] ribosome recycling factor; [GO:0006412] translation 41.75 0.6916 30 Mapoly0123s0021 [PTHR15367:SF2] gb def: ENSANGP00000011763 (Fragment); [PF11705] DNA-directed RNA polymerase III subunit Rpc31; [PTHR15367] DNA-DIRECTED RNA POLYMERASE III 43.68 0.6402 31 Mapoly0072s0109 - 43.99 0.7236 32 Mapoly0027s0128 [GO:0006260] DNA replication; [PTHR10302] SINGLE-STRANDED DNA-BINDING PROTEIN; [GO:0003697] single-stranded DNA binding; [PTHR10302:SF0] SINGLE-STRANDED DNA-BINDING PROTEIN; [PF00436] Single-strand binding protein family 47.56 0.7119 33 Mapoly0115s0026 [KOG4134] DNA-dependent RNA polymerase I; [PTHR12709] DNA-DIRECTED RNA POLYMERASE II, III 51.38 0.7556 34 Mapoly0004s0159 - 52.31 0.6979 35 Mapoly0001s0280 [GO:0005524] ATP binding; [KOG0340] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 54.99 0.7536 36 Mapoly0001s0281 [PF03914] CBF/Mak21 family; [PTHR14428:SF5] SUBFAMILY NOT NAMED; [PF07540] Nucleolar complex-associated protein; [PTHR14428] NUCLEOLAR COMPLEX PROTEIN 3; [KOG2153] Protein involved in the nuclear export of pre-ribosomes 55.52 0.7456 37 Mapoly0091s0022 [KOG1521] RNA polymerase I and III, subunit RPA40/RPC40; [GO:0046983] protein dimerization activity; [PTHR11800:SF13] DNA-DIRECTED RNA POLYMERASE I; [PF01000] RNA polymerase Rpb3/RpoA insert domain; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR11800] DNA-DIRECTED RNA POLYMERASE; [PF01193] RNA polymerase Rpb3/Rpb11 dimerisation domain 56.44 0.7310 38 Mapoly0102s0005 [PF06962] Putative rRNA methylase 56.67 0.7002 39 Mapoly0006s0064 [PTHR23002] ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN; [PF14392] Zinc knuckle; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding 56.92 0.7357 40 Mapoly0102s0014 [KOG2857] Predicted MYND Zn-finger protein/hormone receptor interactor; [PTHR13241] THYROID RECEPTOR INTERACTING PROTEIN 3; [PF04438] HIT zinc finger 58.33 0.7468 41 Mapoly0031s0027 [GO:0003723] RNA binding; [PF01985] CRS1 / YhbY (CRM) domain; [PTHR31426] FAMILY NOT NAMED 58.96 0.7458 42 Mapoly0009s0198 [GO:0003723] RNA binding; [PTHR14911] FAMILY NOT NAMED; [PF02926] THUMP domain; [PF01170] Putative RNA methylase family UPF0020 59.33 0.7238 43 Mapoly0161s0019 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PF06179] Surfeit locus protein 5 subunit 22 of Mediator complex; [PTHR12434] FAMILY NOT NAMED; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [KOG3304] Surfeit family protein 5 59.92 0.6542 44 Mapoly0002s0233 [GO:0008168] methyltransferase activity; [KOG2899] Predicted methyltransferase; [PF06859] Bicoid-interacting protein 3 (Bin3); [PTHR12315:SF0] SUBFAMILY NOT NAMED; [PTHR12315] BICOID-INTERACTING PROTEIN RELATED 60.79 0.7049 45 Mapoly0021s0161 [KOG0331] ATP-dependent RNA helicase; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PF08152] GUCT (NUC152) domain; [GO:0005634] nucleus; [PTHR24031:SF136] PREDICTED PROTEIN (FRAGMENT); [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 62.05 0.6325 46 Mapoly0003s0305 [PF13481] AAA domain; [PF13662] Toprim domain; [GO:0003697] single-stranded DNA binding; [PTHR12873] T7-LIKE MITOCHONDRIAL DNA HELICASE; [KOG2373] Predicted mitochondrial DNA helicase twinkle; [GO:0043139] 5'-3' DNA helicase activity 63.99 0.7051 47 Mapoly0029s0084 - 65.51 0.6656 48 Mapoly0131s0007 [PF14937] Domain of unknown function (DUF4500) 65.53 0.6132 49 Mapoly0459s0001 - 68.41 0.6409 50 Mapoly0100s0030 - 69.38 0.7371