Guide Gene

Gene ID
Mapoly0068s0103
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0008168] methyltransferase activity; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process; [KOG4300] Predicted methyltransferase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0068s0103 [GO:0008168] methyltransferase activity; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process; [KOG4300] Predicted methyltransferase 0.00 1.0000
1 Mapoly0069s0053 [GO:0050660] flavin adenine dinucleotide binding; [K03495] glucose inhibited division protein A; [PTHR11806:SF1] GLUCOSE INHIBITED DIVISION PROTEIN A; [PTHR11806] GLUCOSE INHIBITED DIVISION PROTEIN A; [PF01134] Glucose inhibited division protein A; [KOG2311] NAD/FAD-utilizing protein possibly involved in translation; [GO:0008033] tRNA processing; [PF13932] GidA associated domain 33.000.8845
2 Mapoly0086s0032 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02835] peptide chain release factor RF-1; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity3.870.8887
3 Mapoly0059s0075 -5.480.8847
4 Mapoly0112s0045 [GO:0004659] prenyltransferase activity; [K02548] 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]; [PTHR13929] 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE; [GO:0016021] integral to membrane; [2.5.1.74] 1,4-dihydroxy-2-naphthoate polyprenyltransferase.; [KOG4581] Predicted membrane protein; [PF01040] UbiA prenyltransferase family6.710.8795
5 Mapoly0055s0018 [GO:0003723] RNA binding; [K03595] GTP-binding protein Era; [PTHR11649:SF3] GTP-BINDING PROTEIN ERA; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding9.380.8816
6 Mapoly0006s0179 [PF00773] RNB domain; [PTHR23355] RIBONUCLEASE; [KOG2102] Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis39.490.8569
7 Mapoly0007s0136 [GO:0005737] cytoplasm; [PTHR11476] HISTIDYL-TRNA SYNTHETASE; [PF13393] Histidyl-tRNA synthetase15.490.8549
8 Mapoly0042s0009 [PTHR24012] FAMILY NOT NAMED; [KOG0131] Splicing factor 3b, subunit 4; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)15.750.8688
9 Mapoly0033s0078 [GO:0016020] membrane; [PTHR10906:SF2] PROTEIN TRANSLOCASE SECY SUBUNIT; [PF00344] SecY translocase; [GO:0015031] protein transport; [K10956] protein transport protein SEC61 subunit alpha; [PTHR10906] SECY/SEC61-ALPHA FAMILY MEMBER16.060.8759
10 Mapoly0024s0038 [GO:0002161] aminoacyl-tRNA editing activity; [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [6.1.1.4] Leucine--tRNA ligase.; [KOG0435] Leucyl-tRNA synthetase; [PF13603] Leucyl-tRNA synthetase, Domain 2; [PTHR11946:SF7] LEUCYL-TRNA SYNTHETASE; [GO:0004823] leucine-tRNA ligase activity; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0006429] leucyl-tRNA aminoacylation; [K01869] leucyl-tRNA synthetase [EC:6.1.1.4]; [PF09334] tRNA synthetases class I (M); [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity19.080.8506
11 Mapoly0024s0117 -19.360.8596
12 Mapoly0020s0094 -19.970.8716
13 Mapoly0127s0016 [K00540] formate acetyltransferase activating enzyme [EC:1.97.1.4]; [1.-.-.-] Oxidoreductases.22.580.8437
14 Mapoly0111s0024 -22.910.8522
15 Mapoly0030s0106 [GO:0031072] heat shock protein binding; [KOG0715] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [PF01556] DnaJ C terminal domain; [PTHR24076] FAMILY NOT NAMED; [PF00684] DnaJ central domain; [GO:0051082] unfolded protein binding22.980.8256
16 Mapoly0082s0064 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding23.450.8642
17 Mapoly0113s0009 [PF12638] Staygreen protein; [PTHR31750] FAMILY NOT NAMED24.720.8616
18 Mapoly0030s0153 [PF13460] NADH(P)-binding; [PTHR14194] NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED27.820.8266
19 Mapoly0088s0012 -28.140.8675
20 Mapoly0028s0136 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [PTHR24290] FAMILY NOT NAMED; [GO:0020037] heme binding; [K09837] carotenoid epsilon-ring hydroxylase; [PF00067] Cytochrome P45029.390.8533
21 Mapoly0125s0038 -30.740.8252
22 Mapoly0157s0020 [GO:0015031] protein transport; [GO:0006457] protein folding; [PF05698] Bacterial trigger factor protein (TF) C-terminus; [PF05697] Bacterial trigger factor protein (TF); [PTHR30560] TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE31.640.8632
23 Mapoly0002s0242 -32.120.8624
24 Mapoly0043s0143 [PF00687] Ribosomal protein L1p/L10e family; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG1569] 50S ribosomal protein L132.830.8606
25 Mapoly0012s0071 [PTHR18952] CARBONIC ANHYDRASE; [PF00194] Eukaryotic-type carbonic anhydrase; [KOG0382] Carbonic anhydrase33.940.8123
26 Mapoly0039s0078 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family34.410.8390
27 Mapoly0040s0099 [6.6.1.1] Magnesium chelatase.; [GO:0016851] magnesium chelatase activity; [PF01078] Magnesium chelatase, subunit ChlI; [GO:0015995] chlorophyll biosynthetic process; [K03405] magnesium chelatase subunit I [EC:6.6.1.1]; [GO:0015979] photosynthesis35.550.8589
28 Mapoly0003s0142 [GO:0006355] regulation of transcription, DNA-dependent; [PF02357] Transcription termination factor nusG; [PTHR30265] RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG35.920.8057
29 Mapoly0095s0002 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [PTHR24031:SF35] DEAD/DEAH BOX HELICASE, PUTATIVE (MITOCHONDRIAL); [GO:0003676] nucleic acid binding35.940.8112
30 Mapoly0103s0078 [GO:0006779] porphyrin-containing compound biosynthetic process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [KOG2872] Uroporphyrinogen decarboxylase; [PF01208] Uroporphyrinogen decarboxylase (URO-D); [GO:0004853] uroporphyrinogen decarboxylase activity37.230.8541
31 Mapoly0041s0034 [PF03725] 3' exoribonuclease family, domain 2; [GO:0003723] RNA binding; [K00962] polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]; [KOG1067] Predicted RNA-binding polyribonucleotide nucleotidyltransferase; [PF00575] S1 RNA binding domain; [2.7.7.8] Polyribonucleotide nucleotidyltransferase.; [GO:0004654] polyribonucleotide nucleotidyltransferase activity; [PF00013] KH domain; [PTHR11252:SF1] POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE; [GO:0006402] mRNA catabolic process; [PF01138] 3' exoribonuclease family, domain 1; [PTHR11252] POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE39.000.8329
32 Mapoly0001s0232 [GO:0005840] ribosome; [KOG1624] Mitochondrial/chloroplast ribosomal protein L4; [GO:0003735] structural constituent of ribosome; [PF00573] Ribosomal protein L4/L1 family; [PTHR10746] 50S RIBOSOMAL PROTEIN L4; [GO:0006412] translation39.330.8585
33 Mapoly0096s0034 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [GO:0005524] ATP binding; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [PTHR11451:SF5] THREONYL-TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF07973] Threonyl and Alanyl tRNA synthetase second additional domain; [K01868] threonyl-tRNA synthetase [EC:6.1.1.3]; [PTHR11451] TRNA SYNTHETASE-RELATED; [6.1.1.3] Threonine--tRNA ligase.; [PF03129] Anticodon binding domain; [KOG1637] Threonyl-tRNA synthetase; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity39.600.8439
34 Mapoly0050s0024 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process42.500.8543
35 Mapoly0023s0130 [GO:0003723] RNA binding; [PTHR23270] PROGRAMMED CELL DEATH PROTEIN 11 (PRE-RRNA PROCESSING PROTEIN RRP5); [PF00575] S1 RNA binding domain42.580.8349
36 Mapoly0010s0063 [PTHR11601] CYSTEINE DESULFURYLASE; [4.4.1.16] Selenocysteine lyase.; [GO:0008152] metabolic process; [KOG1549] Cysteine desulfurase NFS1; [2.8.1.7] Cysteine desulfurase.; [K11717] cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]; [PF00266] Aminotransferase class-V46.280.7976
37 Mapoly0093s0080 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [GO:0009451] RNA modification; [GO:0009982] pseudouridine synthase activity; [PTHR13767] TRNA-PSEUDOURIDINE SYNTHASE; [K03177] tRNA pseudouridine synthase B [EC:5.4.99.12]; [5.4.99.12] tRNA pseudouridine(38-40) synthase.; [PTHR13767:SF2] TRNA PSEUDOURIDINE SYNTHASE B; [PF01509] TruB family pseudouridylate synthase (N terminal domain)47.180.7743
38 Mapoly0034s0094 [6.6.1.1] Magnesium chelatase.; [PF13519] von Willebrand factor type A domain; [GO:0016851] magnesium chelatase activity; [PF01078] Magnesium chelatase, subunit ChlI; [GO:0015995] chlorophyll biosynthetic process; [K03404] magnesium chelatase subunit D [EC:6.6.1.1]; [GO:0015979] photosynthesis47.490.8294
39 Mapoly0137s0001 [GO:0004830] tryptophan-tRNA ligase activity; [6.1.1.2] Tryptophan--tRNA ligase.; [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [K01867] tryptophanyl-tRNA synthetase [EC:6.1.1.2]; [GO:0006436] tryptophanyl-tRNA aminoacylation; [GO:0006418] tRNA aminoacylation for protein translation; [KOG2713] Mitochondrial tryptophanyl-tRNA synthetase; [PTHR10055] TRYPTOPHANYL-TRNA SYNTHETASE; [GO:0004812] aminoacyl-tRNA ligase activity47.720.8536
40 Mapoly0010s0015 [PF13450] NAD(P)-binding Rossmann-like domain; [5.-.-.-] Isomerases.; [PTHR10668] PHYTOENE DEHYDROGENASE; [KOG4254] Phytoene desaturase; [K09835] carotenoid isomerase [EC:5.-.-.-]47.770.7733
41 Mapoly0050s0006 [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16); [KOG2067] Mitochondrial processing peptidase, alpha subunit49.170.8026
42 Mapoly0027s0167 -49.300.7837
43 Mapoly0030s0067 [PF00550] Phosphopantetheine attachment site; [PTHR20863] ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED49.850.8366
44 Mapoly0002s0241 [K01870] isoleucyl-tRNA synthetase [EC:6.1.1.5]; [GO:0005524] ATP binding; [KOG0433] Isoleucyl-tRNA synthetase; [6.1.1.5] Isoleucine--tRNA ligase.; [GO:0004822] isoleucine-tRNA ligase activity; [PTHR11946:SF9] ISOLEUCYL TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [PF06827] Zinc finger found in FPG and IleRS; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0003824] catalytic activity; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity51.370.8034
45 Mapoly0056s0036 [PTHR20935] PHOSPHOGLYCERATE MUTASE-RELATED; [PF00300] Histidine phosphatase superfamily (branch 1)51.850.8164
46 Mapoly0013s0203 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [PTHR24089:SF45] SUBFAMILY NOT NAMED; [KOG0768] Mitochondrial carrier protein PET854.500.8155
47 Mapoly0112s0034 [KOG1270] Methyltransferases; [GO:0046406] magnesium protoporphyrin IX methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [2.1.1.11] Magnesium protoporphyrin IX methyltransferase.; [GO:0015995] chlorophyll biosynthetic process; [PF07109] Magnesium-protoporphyrin IX methyltransferase C-terminus; [PTHR10108:SF269] BLL8020 PROTEIN; [K03428] magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]55.120.8434
48 Mapoly0003s0298 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family55.140.8090
49 Mapoly0153s0005 [PF06485] Protein of unknown function (DUF1092)55.400.8386
50 Mapoly0004s0122 [PF07498] Rho termination factor, N-terminal domain; [GO:0006353] DNA-dependent transcription, termination55.480.8084
Showing 1 to 50 of 200 records
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