Guide Gene

Gene ID
Mapoly0010s0063
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR11601] CYSTEINE DESULFURYLASE; [4.4.1.16] Selenocysteine lyase.; [GO:0008152] metabolic process; [KOG1549] Cysteine desulfurase NFS1; [2.8.1.7] Cysteine desulfurase.; [K11717] cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]; [PF00266] Aminotransferase class-V

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0010s0063 [PTHR11601] CYSTEINE DESULFURYLASE; [4.4.1.16] Selenocysteine lyase.; [GO:0008152] metabolic process; [KOG1549] Cysteine desulfurase NFS1; [2.8.1.7] Cysteine desulfurase.; [K11717] cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]; [PF00266] Aminotransferase class-V 0.00 1.0000
1 Mapoly0165s0020 [PF00574] Clp protease; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit1.410.8610
2 Mapoly0007s0136 [GO:0005737] cytoplasm; [PTHR11476] HISTIDYL-TRNA SYNTHETASE; [PF13393] Histidyl-tRNA synthetase5.660.8493
3 Mapoly0030s0153 [PF13460] NADH(P)-binding; [PTHR14194] NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED8.120.8344
4 Mapoly0091s0025 [PF00574] Clp protease; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit14.970.8296
5 Mapoly0050s0024 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process16.970.8477
6 Mapoly0069s0053 [GO:0050660] flavin adenine dinucleotide binding; [K03495] glucose inhibited division protein A; [PTHR11806:SF1] GLUCOSE INHIBITED DIVISION PROTEIN A; [PTHR11806] GLUCOSE INHIBITED DIVISION PROTEIN A; [PF01134] Glucose inhibited division protein A; [KOG2311] NAD/FAD-utilizing protein possibly involved in translation; [GO:0008033] tRNA processing; [PF13932] GidA associated domain 318.110.8254
7 Mapoly0041s0034 [PF03725] 3' exoribonuclease family, domain 2; [GO:0003723] RNA binding; [K00962] polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]; [KOG1067] Predicted RNA-binding polyribonucleotide nucleotidyltransferase; [PF00575] S1 RNA binding domain; [2.7.7.8] Polyribonucleotide nucleotidyltransferase.; [GO:0004654] polyribonucleotide nucleotidyltransferase activity; [PF00013] KH domain; [PTHR11252:SF1] POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE; [GO:0006402] mRNA catabolic process; [PF01138] 3' exoribonuclease family, domain 1; [PTHR11252] POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE21.210.8250
8 Mapoly0095s0002 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [PTHR24031:SF35] DEAD/DEAH BOX HELICASE, PUTATIVE (MITOCHONDRIAL); [GO:0003676] nucleic acid binding21.420.8018
9 Mapoly0137s0001 [GO:0004830] tryptophan-tRNA ligase activity; [6.1.1.2] Tryptophan--tRNA ligase.; [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [K01867] tryptophanyl-tRNA synthetase [EC:6.1.1.2]; [GO:0006436] tryptophanyl-tRNA aminoacylation; [GO:0006418] tRNA aminoacylation for protein translation; [KOG2713] Mitochondrial tryptophanyl-tRNA synthetase; [PTHR10055] TRYPTOPHANYL-TRNA SYNTHETASE; [GO:0004812] aminoacyl-tRNA ligase activity24.080.8377
10 Mapoly0107s0055 -24.450.7894
11 Mapoly0088s0012 -28.550.8349
12 Mapoly0064s0090 [PF04536] TLP18.3, Psb32 and MOLO-1 founding proteins of phosphatase29.930.8101
13 Mapoly0059s0075 -34.790.8246
14 Mapoly0042s0010 [GO:0008168] methyltransferase activity; [K07056] TatD-related deoxyribonuclease; [PF00590] Tetrapyrrole (Corrin/Porphyrin) Methylases; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [GO:0008152] metabolic process; [PTHR21091:SF18] S-ADENOSYLMETHIONINE-DEPENDENT METHYTRANSFERASE37.070.6404
15 Mapoly0068s0097 [KOG1575] Voltage-gated shaker-like K+ channel, subunit beta/KCNAB; [PTHR11732:SF7] ALDO-KETO REDUCTASE; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family37.960.8151
16 Mapoly0088s0008 [1.12.98.1] Coenzyme F420 hydrogenase.; [PF04422] Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; [PTHR31332] FAMILY NOT NAMED; [PTHR31332:SF0] SUBFAMILY NOT NAMED; [PF04432] Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; [K00441] coenzyme F420 hydrogenase beta subunit [EC:1.12.98.1]38.110.7738
17 Mapoly0054s0013 [PF12046] Protein of unknown function (DUF3529)38.180.7989
18 Mapoly0051s0032 [PTHR32060] FAMILY NOT NAMED; [PF03572] Peptidase family S41; [PF00595] PDZ domain (Also known as DHR or GLGF); [GO:0008236] serine-type peptidase activity; [GO:0005515] protein binding; [GO:0006508] proteolysis38.390.7596
19 Mapoly0009s0217 [PF11998] Protein of unknown function (DUF3493)39.340.8147
20 Mapoly0009s0214 [PF05421] Protein of unknown function (DUF751)42.510.8101
21 Mapoly0086s0032 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02835] peptide chain release factor RF-1; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity43.650.8100
22 Mapoly0016s0114 [GO:0055114] oxidation-reduction process; [GO:0004392] heme oxygenase (decyclizing) activity; [PF01126] Heme oxygenase; [GO:0006788] heme oxidation; [KOG4480] Heme oxygenase44.450.7984
23 Mapoly0012s0071 [PTHR18952] CARBONIC ANHYDRASE; [PF00194] Eukaryotic-type carbonic anhydrase; [KOG0382] Carbonic anhydrase44.600.7702
24 Mapoly0068s0103 [GO:0008168] methyltransferase activity; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process; [KOG4300] Predicted methyltransferase46.280.7976
25 Mapoly0127s0016 [K00540] formate acetyltransferase activating enzyme [EC:1.97.1.4]; [1.-.-.-] Oxidoreductases.46.990.7912
26 Mapoly0063s0012 [PF02696] Uncharacterized ACR, YdiU/UPF0061 family; [KOG2542] Uncharacterized conserved protein (YdiU family); [PTHR32057:SF1] SUBFAMILY NOT NAMED; [PTHR32057] FAMILY NOT NAMED47.070.6918
27 Mapoly0021s0074 -47.910.7735
28 Mapoly0064s0058 -49.600.7559
29 Mapoly0074s0079 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT51.850.7843
30 Mapoly0152s0023 -52.100.7632
31 Mapoly0027s0170 -52.120.7482
32 Mapoly0027s0167 -55.400.7464
33 Mapoly0086s0021 [PF00226] DnaJ domain; [PTHR24077] FAMILY NOT NAMED58.860.7812
34 Mapoly0109s0018 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG0436] Methionyl-tRNA synthetase59.970.7856
35 Mapoly0023s0121 [PF00488] MutS domain V; [GO:0005524] ATP binding; [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding60.100.7189
36 Mapoly0027s0165 -60.930.7360
37 Mapoly0020s0149 [PTHR32010] FAMILY NOT NAMED; [PF14870] Photosynthesis system II assembly factor YCF4861.320.8053
38 Mapoly0027s0169 -62.230.7383
39 Mapoly0061s0036 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process65.670.7568
40 Mapoly0048s0022 [GO:0005506] iron ion binding; [KOG0156] Cytochrome P450 CYP2 subfamily; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [PTHR24300] FAMILY NOT NAMED; [GO:0020037] heme binding; [PF00067] Cytochrome P45065.950.7187
41 Mapoly0033s0103 [GO:0005199] structural constituent of cell wall; [GO:0009664] plant-type cell wall organization; [PF14368] Probable lipid transfer; [PTHR23201] EXTENSIN, PROLINE-RICH PROTEIN; [PF04554] Extensin-like region65.970.7608
42 Mapoly0067s0096 [PF06421] GTP-binding protein LepA C-terminus; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [K03596] GTP-binding protein LepA; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2; [KOG0462] Elongation factor-type GTP-binding protein66.180.7984
43 Mapoly0107s0036 [PTHR11659] GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT B (MITOCHONDRIAL AND PROKARYOTIC) PET112-RELATED; [PF02637] GatB domain; [GO:0016874] ligase activity; [PTHR11659:SF1] GLUTAMYL-TRNA AMIDOTRANSFERASE SUBUNIT B; [GO:0016884] carbon-nitrogen ligase activity, with glutamine as amido-N-donor; [6.3.5.7] Glutaminyl-tRNA synthase (glutamine-hydrolyzing).; [PF02934] GatB/GatE catalytic domain; [6.3.5.6] Asparaginyl-tRNA synthase (glutamine-hydrolyzing).; [KOG2438] Glutamyl-tRNA amidotransferase subunit B; [K02434] aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]69.800.7540
44 Mapoly4350s0001 -70.820.7531
45 Mapoly0141s0024 [GO:0005524] ATP binding; [K09773] hypothetical protein; [PTHR31756] FAMILY NOT NAMED; [PF03618] Kinase/pyrophosphorylase; [GO:0016772] transferase activity, transferring phosphorus-containing groups72.000.7440
46 Mapoly0005s0049 [GO:0005840] ribosome; [PTHR21011] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6; [KOG4708] Mitochondrial ribosomal protein MRP17; [PF01250] Ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [GO:0019843] rRNA binding; [GO:0006412] translation72.010.7533
47 Mapoly0004s0276 -72.870.7519
48 Mapoly0010s0157 [GO:0005524] ATP binding; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR20953] KINASE-RELATED; [PTHR20953:SF1] gb def: ENSANGP00000014191 (Fragment)73.680.7622
49 Mapoly0120s0023 [PTHR15852] FAMILY NOT NAMED74.700.7858
50 Mapoly0024s0038 [GO:0002161] aminoacyl-tRNA editing activity; [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [6.1.1.4] Leucine--tRNA ligase.; [KOG0435] Leucyl-tRNA synthetase; [PF13603] Leucyl-tRNA synthetase, Domain 2; [PTHR11946:SF7] LEUCYL-TRNA SYNTHETASE; [GO:0004823] leucine-tRNA ligase activity; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0006429] leucyl-tRNA aminoacylation; [K01869] leucyl-tRNA synthetase [EC:6.1.1.4]; [PF09334] tRNA synthetases class I (M); [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity74.770.7607
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