Guide Gene

Gene ID
Mapoly0125s0038
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
-

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0125s0038 - 0.00 1.0000
1 Mapoly0037s0113 [GO:0003723] RNA binding; [PF07521] RNA-metabolising metallo-beta-lactamase; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [PTHR11203:SF22] BETA-LACTAMASE DOMAIN PROTEIN; [PF00753] Metallo-beta-lactamase superfamily; [GO:0016788] hydrolase activity, acting on ester bonds; [PF13837] Myb/SANT-like DNA-binding domain; [GO:0046872] metal ion binding3.000.8938
2 Mapoly0040s0139 [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [PF10458] Valyl tRNA synthetase tRNA binding arm; [PF08264] Anticodon-binding domain of tRNA; [KOG0432] Valyl-tRNA synthetase; [6.1.1.9] Valine--tRNA ligase.; [GO:0004832] valine-tRNA ligase activity; [GO:0006438] valyl-tRNA aminoacylation; [K01873] valyl-tRNA synthetase [EC:6.1.1.9]; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity3.740.8883
3 Mapoly0009s0196 [GO:0000287] magnesium ion binding; [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [PTHR11702:SF3] MITOCHONDRIAL GTPASE 2(YEAST)/OBG-RELATED; [PF01018] GTP1/OBG; [GO:0003924] GTPase activity; [KOG1489] Predicted GTP-binding protein (ODN superfamily); [GO:0005525] GTP binding4.900.8175
4 Mapoly0062s0099 [PF14237] Domain of unknown function (DUF4339)5.740.8802
5 Mapoly0063s0054 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family9.170.8570
6 Mapoly0052s0067 [GO:0004222] metalloendopeptidase activity; [GO:0005524] ATP binding; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis9.380.8506
7 Mapoly0120s0021 -9.380.8758
8 Mapoly0136s0003 [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [GO:0000166] nucleotide binding; [PTHR11702:SF20] GTP-BINDING PROTEIN; [PF09269] Domain of unknown function (DUF1967); [PF01018] GTP1/OBG; [KOG1489] Predicted GTP-binding protein (ODN superfamily); [GO:0005525] GTP binding11.400.8733
9 Mapoly0080s0087 [PF09285] Elongation factor P, C-terminal; [GO:0003746] translation elongation factor activity; [GO:0006414] translational elongation; [GO:0005737] cytoplasm; [GO:0043043] peptide biosynthetic process; [K02356] elongation factor EF-P; [PF08207] Elongation factor P (EF-P) KOW-like domain; [PF01132] Elongation factor P (EF-P) OB domain; [PTHR30053] ELONGATION FACTOR P11.830.8526
10 Mapoly0056s0018 [GO:0004222] metalloendopeptidase activity; [GO:0005524] ATP binding; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis12.490.8456
11 Mapoly0024s0038 [GO:0002161] aminoacyl-tRNA editing activity; [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [6.1.1.4] Leucine--tRNA ligase.; [KOG0435] Leucyl-tRNA synthetase; [PF13603] Leucyl-tRNA synthetase, Domain 2; [PTHR11946:SF7] LEUCYL-TRNA SYNTHETASE; [GO:0004823] leucine-tRNA ligase activity; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0006429] leucyl-tRNA aminoacylation; [K01869] leucyl-tRNA synthetase [EC:6.1.1.4]; [PF09334] tRNA synthetases class I (M); [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity17.440.8378
12 Mapoly0007s0136 [GO:0005737] cytoplasm; [PTHR11476] HISTIDYL-TRNA SYNTHETASE; [PF13393] Histidyl-tRNA synthetase17.750.8422
13 Mapoly0034s0094 [6.6.1.1] Magnesium chelatase.; [PF13519] von Willebrand factor type A domain; [GO:0016851] magnesium chelatase activity; [PF01078] Magnesium chelatase, subunit ChlI; [GO:0015995] chlorophyll biosynthetic process; [K03404] magnesium chelatase subunit D [EC:6.6.1.1]; [GO:0015979] photosynthesis17.750.8505
14 Mapoly0008s0219 -18.330.8138
15 Mapoly0005s0038 [KOG2743] Cobalamin synthesis protein; [PTHR13748:SF11] PRLI-INTERACTING FACTOR L; [PF07683] Cobalamin synthesis protein cobW C-terminal domain; [PTHR13748] COBW-RELATED; [PF02492] CobW/HypB/UreG, nucleotide-binding domain19.750.8492
16 Mapoly0002s0312 [PTHR11712] POLYKETIDE SYNTHASE-RELATED; [PF00109] Beta-ketoacyl synthase, N-terminal domain; [PF02801] Beta-ketoacyl synthase, C-terminal domain; [KOG1394] 3-oxoacyl-(acyl-carrier-protein) synthase (I and II)20.200.8020
17 Mapoly0001s0084 [PF13424] Tetratricopeptide repeat; [PF13374] Tetratricopeptide repeat; [KOG1840] Kinesin light chain; [PTHR19959] KINESIN LIGHT CHAIN20.350.8180
18 Mapoly0031s0123 [PF13812] Pentatricopeptide repeat domain; [PTHR31407] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF02037] SAP domain21.020.8449
19 Mapoly0051s0001 [GO:0006433] prolyl-tRNA aminoacylation; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [PTHR11451:SF6] PROLYL-TRNA SYNTHETASE; [GO:0004827] proline-tRNA ligase activity; [KOG4163] Prolyl-tRNA synthetase; [PTHR11451] TRNA SYNTHETASE-RELATED; [PF03129] Anticodon binding domain; [6.1.1.15] Proline--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF09180] Prolyl-tRNA synthetase, C-terminal; [K01881] prolyl-tRNA synthetase [EC:6.1.1.15]21.170.8436
20 Mapoly0090s0039 [KOG4308] LRR-containing protein; [PF13516] Leucine Rich repeat; [PTHR24106] FAMILY NOT NAMED22.020.7482
21 Mapoly0050s0006 [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16); [KOG2067] Mitochondrial processing peptidase, alpha subunit23.810.8138
22 Mapoly0054s0113 [GO:0006396] RNA processing; [2.1.1.-] Methyltransferases.; [PTHR11061] RNA M5U METHYLTRANSFERASE FAMILY; [K00599] trans-aconitate 2-methyltransferase [EC:2.1.1.144]; [GO:0008173] RNA methyltransferase activity; [PF05958] tRNA (Uracil-5-)-methyltransferase; [KOG2187] tRNA uracil-5-methyltransferase and related tRNA-modifying enzymes24.660.8263
23 Mapoly0041s0034 [PF03725] 3' exoribonuclease family, domain 2; [GO:0003723] RNA binding; [K00962] polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]; [KOG1067] Predicted RNA-binding polyribonucleotide nucleotidyltransferase; [PF00575] S1 RNA binding domain; [2.7.7.8] Polyribonucleotide nucleotidyltransferase.; [GO:0004654] polyribonucleotide nucleotidyltransferase activity; [PF00013] KH domain; [PTHR11252:SF1] POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE; [GO:0006402] mRNA catabolic process; [PF01138] 3' exoribonuclease family, domain 1; [PTHR11252] POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE24.740.8353
24 Mapoly0091s0082 [PF08245] Mur ligase middle domain; [GO:0005524] ATP binding; [PTHR23135:SF4] UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE; [GO:0016874] ligase activity; [GO:0009058] biosynthetic process; [PF01225] Mur ligase family, catalytic domain; [PF02875] Mur ligase family, glutamate ligase domain; [KOG2525] Folylpolyglutamate synthase; [PTHR23135] MUR LIGASE FAMILY MEMBER24.900.8258
25 Mapoly0045s0055 -25.400.7941
26 Mapoly0029s0082 [GO:0005524] ATP binding; [K01876] aspartyl-tRNA synthetase [EC:6.1.1.12]; [GO:0016874] ligase activity; [6.1.1.12] Aspartate--tRNA ligase.; [PF02938] GAD domain; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [KOG2411] Aspartyl-tRNA synthetase, mitochondrial; [PTHR22594:SF5] ASPARTYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)25.460.8017
27 Mapoly0055s0018 [GO:0003723] RNA binding; [K03595] GTP-binding protein Era; [PTHR11649:SF3] GTP-BINDING PROTEIN ERA; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding25.900.8487
28 Mapoly0174s0005 [3.4.11.1] Leucyl aminopeptidase.; [GO:0004177] aminopeptidase activity; [KOG2597] Predicted aminopeptidase of the M17 family; [PTHR11963:SF11] CYTOSOL AMINOPEPTIDASE; [GO:0005622] intracellular; [PTHR11963] LEUCINE AMINOPEPTIDASE-RELATED; [GO:0006508] proteolysis; [PF00883] Cytosol aminopeptidase family, catalytic domain; [PF02789] Cytosol aminopeptidase family, N-terminal domain; [K01255] leucyl aminopeptidase [EC:3.4.11.1]27.570.8003
29 Mapoly0002s0241 [K01870] isoleucyl-tRNA synthetase [EC:6.1.1.5]; [GO:0005524] ATP binding; [KOG0433] Isoleucyl-tRNA synthetase; [6.1.1.5] Isoleucine--tRNA ligase.; [GO:0004822] isoleucine-tRNA ligase activity; [PTHR11946:SF9] ISOLEUCYL TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [PF06827] Zinc finger found in FPG and IleRS; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0003824] catalytic activity; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity28.840.8058
30 Mapoly0008s0120 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding28.860.7884
31 Mapoly0021s0085 [GO:0055114] oxidation-reduction process; [PF01266] FAD dependent oxidoreductase; [PF01494] FAD binding domain; [GO:0016491] oxidoreductase activity; [PTHR10617] ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE28.980.7981
32 Mapoly0068s0103 [GO:0008168] methyltransferase activity; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process; [KOG4300] Predicted methyltransferase30.740.8252
33 Mapoly0023s0121 [PF00488] MutS domain V; [GO:0005524] ATP binding; [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding31.460.7478
34 Mapoly0141s0001 [PTHR12770] FAMILY NOT NAMED; [PF04884] Vitamin B6 photo-protection and homoeostasis; [KOG4249] Uncharacterized conserved protein; [PTHR12770:SF7] SUBFAMILY NOT NAMED31.730.7794
35 Mapoly0069s0053 [GO:0050660] flavin adenine dinucleotide binding; [K03495] glucose inhibited division protein A; [PTHR11806:SF1] GLUCOSE INHIBITED DIVISION PROTEIN A; [PTHR11806] GLUCOSE INHIBITED DIVISION PROTEIN A; [PF01134] Glucose inhibited division protein A; [KOG2311] NAD/FAD-utilizing protein possibly involved in translation; [GO:0008033] tRNA processing; [PF13932] GidA associated domain 332.500.8197
36 Mapoly0079s0067 [PF13450] NAD(P)-binding Rossmann-like domain; [PTHR16128] FAMILY NOT NAMED33.200.8132
37 Mapoly0016s0103 [PTHR32060] FAMILY NOT NAMED; [PF03572] Peptidase family S41; [GO:0008236] serine-type peptidase activity; [GO:0005515] protein binding; [PF13180] PDZ domain; [GO:0006508] proteolysis33.260.7603
38 Mapoly0040s0083 [PF13650] Aspartyl protease34.470.7937
39 Mapoly0037s0028 [GO:0016020] membrane; [PF01148] Cytidylyltransferase family; [PTHR13773] PHOSPHATIDATE CYTIDYLYLTRANSFERASE; [GO:0016772] transferase activity, transferring phosphorus-containing groups37.310.7885
40 Mapoly0091s0043 [PF00264] Common central domain of tyrosinase; [PF12142] Polyphenol oxidase middle domain; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity; [PF12143] Protein of unknown function (DUF_B2219)38.410.7729
41 Mapoly0006s0098 [GO:0003723] RNA binding; [KOG1990] Poly(A)-specific exoribonuclease PARN; [PF01985] CRS1 / YhbY (CRM) domain; [PTHR31846] FAMILY NOT NAMED38.730.7713
42 Mapoly0086s0032 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02835] peptide chain release factor RF-1; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity40.020.8314
43 Mapoly0114s0038 [PF13812] Pentatricopeptide repeat domain; [PTHR13547] UNCHARACTERIZED; [PTHR13547:SF2] gb def: hypothetical protein [arabidopsis thaliana]; [PF11977] Zc3h12a-like Ribonuclease NYN domain40.470.7989
44 Mapoly0092s0063 [PF03235] Protein of unknown function DUF26240.890.6905
45 Mapoly0047s0104 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family41.290.8074
46 Mapoly0060s0041 [PF05303] Protein of unknown function (DUF727); [PF12807] Translation initiation factor eIF3 subunit 135; [PF13236] Clustered mitochondria; [PF13424] Tetratricopeptide repeat; [PTHR12601] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT (EIF-3); [PF15044] Mitochondrial function, CLU-N-term41.290.7764
47 Mapoly0006s0179 [PF00773] RNB domain; [PTHR23355] RIBONUCLEASE; [KOG2102] Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis341.500.7979
48 Mapoly0109s0018 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG0436] Methionyl-tRNA synthetase41.530.8163
49 Mapoly0015s0009 [GO:0006779] porphyrin-containing compound biosynthetic process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [KOG2872] Uroporphyrinogen decarboxylase; [PF01208] Uroporphyrinogen decarboxylase (URO-D); [GO:0004853] uroporphyrinogen decarboxylase activity43.080.7737
50 Mapoly0145s0006 [PF00264] Common central domain of tyrosinase; [PF12142] Polyphenol oxidase middle domain; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity; [PF12143] Protein of unknown function (DUF_B2219)45.370.7481
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