Guide Gene
- Gene ID
- Mapoly0008s0120
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0008s0120 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 0.00 1.0000 1 Mapoly0056s0018 [GO:0004222] metalloendopeptidase activity; [GO:0005524] ATP binding; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis 1.73 0.8848 2 Mapoly0001s0084 [PF13424] Tetratricopeptide repeat; [PF13374] Tetratricopeptide repeat; [KOG1840] Kinesin light chain; [PTHR19959] KINESIN LIGHT CHAIN 3.16 0.8734 3 Mapoly0141s0001 [PTHR12770] FAMILY NOT NAMED; [PF04884] Vitamin B6 photo-protection and homoeostasis; [KOG4249] Uncharacterized conserved protein; [PTHR12770:SF7] SUBFAMILY NOT NAMED 3.46 0.8485 4 Mapoly0006s0098 [GO:0003723] RNA binding; [KOG1990] Poly(A)-specific exoribonuclease PARN; [PF01985] CRS1 / YhbY (CRM) domain; [PTHR31846] FAMILY NOT NAMED 6.00 0.8396 5 Mapoly0048s0045 [GO:0006355] regulation of transcription, DNA-dependent; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR32467] FAMILY NOT NAMED 7.55 0.7738 6 Mapoly0008s0219 - 8.49 0.8368 7 Mapoly0037s0113 [GO:0003723] RNA binding; [PF07521] RNA-metabolising metallo-beta-lactamase; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [PTHR11203:SF22] BETA-LACTAMASE DOMAIN PROTEIN; [PF00753] Metallo-beta-lactamase superfamily; [GO:0016788] hydrolase activity, acting on ester bonds; [PF13837] Myb/SANT-like DNA-binding domain; [GO:0046872] metal ion binding 8.66 0.8499 8 Mapoly0052s0067 [GO:0004222] metalloendopeptidase activity; [GO:0005524] ATP binding; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis 9.54 0.8393 9 Mapoly0090s0039 [KOG4308] LRR-containing protein; [PF13516] Leucine Rich repeat; [PTHR24106] FAMILY NOT NAMED 9.80 0.7552 10 Mapoly0022s0147 [KOG1191] Mitochondrial GTPase; [PF01926] 50S ribosome-binding GTPase; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF14714] KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; [GO:0005525] GTP binding 11.96 0.8217 11 Mapoly0061s0053 - 12.65 0.8274 12 Mapoly0120s0021 - 12.85 0.8470 13 Mapoly0042s0040 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED 13.86 0.6937 14 Mapoly0074s0047 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR10071] TRANSCRIPTION FACTOR GATA (GATA BINDING FACTOR); [GO:0008270] zinc ion binding; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF00320] GATA zinc finger 14.97 0.7437 15 Mapoly0062s0042 [GO:0015684] ferrous iron transport; [PF02421] Ferrous iron transport protein B; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [GO:0015093] ferrous iron transmembrane transporter activity; [GO:0016021] integral to membrane; [PTHR11702:SF4] NUCLEOLAR GTP-BINDING PROTEIN 1; [PF06858] Nucleolar GTP-binding protein 1 (NOG1); [GO:0005525] GTP binding 15.33 0.7097 16 Mapoly0040s0139 [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [PF10458] Valyl tRNA synthetase tRNA binding arm; [PF08264] Anticodon-binding domain of tRNA; [KOG0432] Valyl-tRNA synthetase; [6.1.1.9] Valine--tRNA ligase.; [GO:0004832] valine-tRNA ligase activity; [GO:0006438] valyl-tRNA aminoacylation; [K01873] valyl-tRNA synthetase [EC:6.1.1.9]; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity 16.97 0.8371 17 Mapoly0054s0113 [GO:0006396] RNA processing; [2.1.1.-] Methyltransferases.; [PTHR11061] RNA M5U METHYLTRANSFERASE FAMILY; [K00599] trans-aconitate 2-methyltransferase [EC:2.1.1.144]; [GO:0008173] RNA methyltransferase activity; [PF05958] tRNA (Uracil-5-)-methyltransferase; [KOG2187] tRNA uracil-5-methyltransferase and related tRNA-modifying enzymes 20.20 0.8191 18 Mapoly0056s0004 - 20.35 0.7755 19 Mapoly0091s0082 [PF08245] Mur ligase middle domain; [GO:0005524] ATP binding; [PTHR23135:SF4] UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE; [GO:0016874] ligase activity; [GO:0009058] biosynthetic process; [PF01225] Mur ligase family, catalytic domain; [PF02875] Mur ligase family, glutamate ligase domain; [KOG2525] Folylpolyglutamate synthase; [PTHR23135] MUR LIGASE FAMILY MEMBER 21.02 0.8184 20 Mapoly0154s0029 [GO:0016020] membrane; [PF02517] CAAX protease self-immunity; [PTHR10794] ABHYDROLASE DOMAIN-CONTAINING PROTEIN; [K07052] TatD-related deoxyribonuclease 22.29 0.6816 21 Mapoly0048s0090 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 22.63 0.7999 22 Mapoly0031s0123 [PF13812] Pentatricopeptide repeat domain; [PTHR31407] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF02037] SAP domain 25.10 0.8176 23 Mapoly0092s0063 [PF03235] Protein of unknown function DUF262 25.69 0.6855 24 Mapoly0060s0041 [PF05303] Protein of unknown function (DUF727); [PF12807] Translation initiation factor eIF3 subunit 135; [PF13236] Clustered mitochondria; [PF13424] Tetratricopeptide repeat; [PTHR12601] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT (EIF-3); [PF15044] Mitochondrial function, CLU-N-term 26.46 0.7708 25 Mapoly0009s0196 [GO:0000287] magnesium ion binding; [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [PTHR11702:SF3] MITOCHONDRIAL GTPASE 2(YEAST)/OBG-RELATED; [PF01018] GTP1/OBG; [GO:0003924] GTPase activity; [KOG1489] Predicted GTP-binding protein (ODN superfamily); [GO:0005525] GTP binding 26.50 0.7517 26 Mapoly0079s0067 [PF13450] NAD(P)-binding Rossmann-like domain; [PTHR16128] FAMILY NOT NAMED 27.39 0.8011 27 Mapoly0145s0006 [PF00264] Common central domain of tyrosinase; [PF12142] Polyphenol oxidase middle domain; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity; [PF12143] Protein of unknown function (DUF_B2219) 28.28 0.7383 28 Mapoly0125s0038 - 28.86 0.7884 29 Mapoly0023s0121 [PF00488] MutS domain V; [GO:0005524] ATP binding; [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding 33.54 0.7114 30 Mapoly0074s0025 [PTHR12933] ORF PROTEIN-RELATED; [PF06862] Protein of unknown function (DUF1253); [KOG2340] Uncharacterized conserved protein; [GO:0005634] nucleus 36.99 0.6435 31 Mapoly0021s0145 [PF02493] MORN repeat 39.97 0.7352 32 Mapoly0074s0049 [PTHR11089] GTP-BINDING PROTEIN-RELATED; [PF01926] 50S ribosome-binding GTPase; [KOG1249] Predicted GTPases; [GO:0005525] GTP binding 40.21 0.7627 33 Mapoly0003s0137 [3.1.26.11] Ribonuclease Z.; [PTHR12553] RIBONUCLEASE Z; [K00784] ribonuclease Z [EC:3.1.26.11]; [PF13691] tRNase Z endonuclease; [KOG2121] Predicted metal-dependent hydrolase (beta-lactamase superfamily); [PF12706] Beta-lactamase superfamily domain; [GO:0008033] tRNA processing 41.35 0.7274 34 Mapoly0061s0009 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 44.02 0.6997 35 Mapoly0037s0133 - 44.19 0.6939 36 Mapoly0025s0053 [PF02576] Uncharacterised BCR, YhbC family COG0779 44.74 0.6194 37 Mapoly0014s0202 [PTHR11089] GTP-BINDING PROTEIN-RELATED; [PF01926] 50S ribosome-binding GTPase; [PTHR11089:SF3] GTP-BINDING PROTEIN-RELATED PLANT/BACTERIA; [K13427] nitric-oxide synthase, plant [EC:1.14.13.39]; [1.14.13.39] Nitric-oxide synthase (NADPH dependent).; [GO:0005525] GTP binding 48.48 0.6624 38 Mapoly0114s0038 [PF13812] Pentatricopeptide repeat domain; [PTHR13547] UNCHARACTERIZED; [PTHR13547:SF2] gb def: hypothetical protein [arabidopsis thaliana]; [PF11977] Zc3h12a-like Ribonuclease NYN domain 48.91 0.7529 39 Mapoly0002s0142 - 50.73 0.7373 40 Mapoly0002s0241 [K01870] isoleucyl-tRNA synthetase [EC:6.1.1.5]; [GO:0005524] ATP binding; [KOG0433] Isoleucyl-tRNA synthetase; [6.1.1.5] Isoleucine--tRNA ligase.; [GO:0004822] isoleucine-tRNA ligase activity; [PTHR11946:SF9] ISOLEUCYL TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [PF06827] Zinc finger found in FPG and IleRS; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0003824] catalytic activity; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity 52.82 0.7414 41 Mapoly0080s0050 [GO:0003723] RNA binding; [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [GO:0006355] regulation of transcription, DNA-dependent; [PF01029] NusB family; [2.1.1.-] Methyltransferases.; [KOG1122] tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2); [PF01189] NOL1/NOP2/sun family; [K03500] ribosomal RNA small subunit methyltransferase B [EC:2.1.1.-] 54.08 0.6924 42 Mapoly0160s0012 [PTHR10357] ALPHA-AMYLASE; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF02806] Alpha amylase, C-terminal all-beta domain; [GO:0003824] catalytic activity; [KOG0470] 1,4-alpha-glucan branching enzyme/starch branching enzyme II; [GO:0043169] cation binding; [PF00128] Alpha amylase, catalytic domain; [PF02922] Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 54.31 0.7536 43 Mapoly0091s0043 [PF00264] Common central domain of tyrosinase; [PF12142] Polyphenol oxidase middle domain; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity; [PF12143] Protein of unknown function (DUF_B2219) 55.25 0.7157 44 Mapoly0095s0027 [GO:0003913] DNA photolyase activity; [KOG0133] Deoxyribodipyrimidine photolyase/cryptochrome; [PTHR11455] CRYPTOCHROME; [PF00875] DNA photolyase; [PF03441] FAD binding domain of DNA photolyase; [GO:0006281] DNA repair; [K02295] cryptochrome 59.13 0.6200 45 Mapoly0132s0018 [GO:0008168] methyltransferase activity; [GO:0032259] methylation; [PF04072] Leucine carboxyl methyltransferase 59.33 0.6467 46 Mapoly0071s0027 [GO:0008168] methyltransferase activity; [PF01795] MraW methylase family; [KOG2782] Putative SAM dependent methyltransferases; [PTHR11265] S-ADENOSYL-METHYLTRANSFERASE MRAW; [PTHR11265:SF0] SUBFAMILY NOT NAMED 62.40 0.6415 47 Mapoly0001s0215 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR15657:SF1] SUBFAMILY NOT NAMED; [PF08524] rRNA processing; [PTHR15657] UNCHARACTERIZED 62.67 0.6408 48 Mapoly0021s0085 [GO:0055114] oxidation-reduction process; [PF01266] FAD dependent oxidoreductase; [PF01494] FAD binding domain; [GO:0016491] oxidoreductase activity; [PTHR10617] ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE 63.80 0.7277 49 Mapoly0051s0001 [GO:0006433] prolyl-tRNA aminoacylation; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [PTHR11451:SF6] PROLYL-TRNA SYNTHETASE; [GO:0004827] proline-tRNA ligase activity; [KOG4163] Prolyl-tRNA synthetase; [PTHR11451] TRNA SYNTHETASE-RELATED; [PF03129] Anticodon binding domain; [6.1.1.15] Proline--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF09180] Prolyl-tRNA synthetase, C-terminal; [K01881] prolyl-tRNA synthetase [EC:6.1.1.15] 66.35 0.7400 50 Mapoly0055s0018 [GO:0003723] RNA binding; [K03595] GTP-binding protein Era; [PTHR11649:SF3] GTP-BINDING PROTEIN ERA; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding 67.16 0.7619