Guide Gene
- Gene ID
- Mapoly0048s0045
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0006355] regulation of transcription, DNA-dependent; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR32467] FAMILY NOT NAMED
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0048s0045 [GO:0006355] regulation of transcription, DNA-dependent; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR32467] FAMILY NOT NAMED 0.00 1.0000 1 Mapoly0008s0219 - 4.58 0.7918 2 Mapoly0022s0147 [KOG1191] Mitochondrial GTPase; [PF01926] 50S ribosome-binding GTPase; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF14714] KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; [GO:0005525] GTP binding 6.78 0.7873 3 Mapoly0008s0120 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 7.55 0.7738 4 Mapoly0080s0050 [GO:0003723] RNA binding; [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [GO:0006355] regulation of transcription, DNA-dependent; [PF01029] NusB family; [2.1.1.-] Methyltransferases.; [KOG1122] tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2); [PF01189] NOL1/NOP2/sun family; [K03500] ribosomal RNA small subunit methyltransferase B [EC:2.1.1.-] 7.75 0.7534 5 Mapoly0061s0053 - 12.96 0.7736 6 Mapoly0003s0152 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 14.49 0.7274 7 Mapoly0010s0011 [GO:0005737] cytoplasm; [GO:0006974] response to DNA damage stimulus; [GO:0006281] DNA repair; [PF03652] Uncharacterised protein family (UPF0081); [GO:0016788] hydrolase activity, acting on ester bonds; [3.1.-.-] Acting on ester bonds.; [GO:0006310] DNA recombination; [K07447] putative holliday junction resolvase [EC:3.1.-.-] 18.97 0.6938 8 Mapoly0091s0082 [PF08245] Mur ligase middle domain; [GO:0005524] ATP binding; [PTHR23135:SF4] UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE; [GO:0016874] ligase activity; [GO:0009058] biosynthetic process; [PF01225] Mur ligase family, catalytic domain; [PF02875] Mur ligase family, glutamate ligase domain; [KOG2525] Folylpolyglutamate synthase; [PTHR23135] MUR LIGASE FAMILY MEMBER 20.00 0.7560 9 Mapoly0141s0001 [PTHR12770] FAMILY NOT NAMED; [PF04884] Vitamin B6 photo-protection and homoeostasis; [KOG4249] Uncharacterized conserved protein; [PTHR12770:SF7] SUBFAMILY NOT NAMED 22.00 0.7270 10 Mapoly0001s0084 [PF13424] Tetratricopeptide repeat; [PF13374] Tetratricopeptide repeat; [KOG1840] Kinesin light chain; [PTHR19959] KINESIN LIGHT CHAIN 22.09 0.7460 11 Mapoly0109s0052 [4.1.2.25] Dihydroneopterin aldolase.; [PTHR20941] FOLATE SYNTHESIS PROTEINS; [PF02152] Dihydroneopterin aldolase; [K01633] dihydroneopterin aldolase [EC:4.1.2.25]; [GO:0004150] dihydroneopterin aldolase activity; [GO:0006760] folic acid-containing compound metabolic process 25.10 0.6515 12 Mapoly0054s0113 [GO:0006396] RNA processing; [2.1.1.-] Methyltransferases.; [PTHR11061] RNA M5U METHYLTRANSFERASE FAMILY; [K00599] trans-aconitate 2-methyltransferase [EC:2.1.1.144]; [GO:0008173] RNA methyltransferase activity; [PF05958] tRNA (Uracil-5-)-methyltransferase; [KOG2187] tRNA uracil-5-methyltransferase and related tRNA-modifying enzymes 25.65 0.7527 13 Mapoly0015s0205 [PTHR12770] FAMILY NOT NAMED; [PTHR12770:SF5] SUBFAMILY NOT NAMED; [PF04884] Vitamin B6 photo-protection and homoeostasis; [KOG4249] Uncharacterized conserved protein 26.27 0.7074 14 Mapoly0074s0049 [PTHR11089] GTP-BINDING PROTEIN-RELATED; [PF01926] 50S ribosome-binding GTPase; [KOG1249] Predicted GTPases; [GO:0005525] GTP binding 33.54 0.7360 15 Mapoly0003s0137 [3.1.26.11] Ribonuclease Z.; [PTHR12553] RIBONUCLEASE Z; [K00784] ribonuclease Z [EC:3.1.26.11]; [PF13691] tRNase Z endonuclease; [KOG2121] Predicted metal-dependent hydrolase (beta-lactamase superfamily); [PF12706] Beta-lactamase superfamily domain; [GO:0008033] tRNA processing 37.74 0.6984 16 Mapoly0037s0133 - 38.37 0.6675 17 Mapoly0120s0021 - 42.51 0.7198 18 Mapoly0051s0110 [KOG2855] Ribokinase; [PF00294] pfkB family carbohydrate kinase; [PTHR10584] SUGAR KINASE 43.82 0.6034 19 Mapoly0160s0012 [PTHR10357] ALPHA-AMYLASE; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF02806] Alpha amylase, C-terminal all-beta domain; [GO:0003824] catalytic activity; [KOG0470] 1,4-alpha-glucan branching enzyme/starch branching enzyme II; [GO:0043169] cation binding; [PF00128] Alpha amylase, catalytic domain; [PF02922] Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 45.17 0.7248 20 Mapoly0048s0090 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 47.73 0.6968 21 Mapoly0146s0011 [PTHR13387] FAMILY NOT NAMED; [PF04063] Domain of unknown function (DUF383); [KOG2973] Uncharacterized conserved protein; [PF04064] Domain of unknown function (DUF384) 48.34 0.6825 22 Mapoly0037s0113 [GO:0003723] RNA binding; [PF07521] RNA-metabolising metallo-beta-lactamase; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [PTHR11203:SF22] BETA-LACTAMASE DOMAIN PROTEIN; [PF00753] Metallo-beta-lactamase superfamily; [GO:0016788] hydrolase activity, acting on ester bonds; [PF13837] Myb/SANT-like DNA-binding domain; [GO:0046872] metal ion binding 51.98 0.7115 23 Mapoly0056s0018 [GO:0004222] metalloendopeptidase activity; [GO:0005524] ATP binding; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis 53.48 0.6687 24 Mapoly0047s0025 [PTHR31755] FAMILY NOT NAMED 54.44 0.6349 25 Mapoly0082s0056 [PTHR13211] UNCHARACTERIZED; [GO:0005515] protein binding; [KOG2919] Guanine nucleotide-binding protein; [PF00400] WD domain, G-beta repeat 55.48 0.6592 26 Mapoly0009s0196 [GO:0000287] magnesium ion binding; [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [PTHR11702:SF3] MITOCHONDRIAL GTPASE 2(YEAST)/OBG-RELATED; [PF01018] GTP1/OBG; [GO:0003924] GTPase activity; [KOG1489] Predicted GTP-binding protein (ODN superfamily); [GO:0005525] GTP binding 55.68 0.6622 27 Mapoly0132s0018 [GO:0008168] methyltransferase activity; [GO:0032259] methylation; [PF04072] Leucine carboxyl methyltransferase 57.30 0.6140 28 Mapoly0101s0005 [K01883] cysteinyl-tRNA synthetase [EC:6.1.1.16]; [PTHR10890] CYSTEINYL-TRNA SYNTHETASE; [PF01406] tRNA synthetases class I (C) catalytic domain; [6.1.1.16] Cysteine--tRNA ligase.; [KOG2007] Cysteinyl-tRNA synthetase 59.46 0.6602 29 Mapoly0010s0013 [PF04387] Protein tyrosine phosphatase-like protein, PTPLA; [KOG3187] Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg); [PTHR11035] PTPLA DOMAIN PROTEIN 61.16 0.5683 30 Mapoly0092s0063 [PF03235] Protein of unknown function DUF262 64.17 0.6060 31 Mapoly0003s0142 [GO:0006355] regulation of transcription, DNA-dependent; [PF02357] Transcription termination factor nusG; [PTHR30265] RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG 64.65 0.6807 32 Mapoly0054s0003 [K01409] O-sialoglycoprotein endopeptidase [EC:3.4.24.57]; [KOG2708] Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold); [PF00814] Glycoprotease family; [PTHR11735] O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; [3.4.24.57] O-sialoglycoprotein endopeptidase.; [PTHR11735:SF6] SUBFAMILY NOT NAMED 65.54 0.6658 33 Mapoly0151s0038 [GO:0016020] membrane; [GO:0055085] transmembrane transport; [KOG4629] Predicted mechanosensitive ion channel; [PTHR31618] FAMILY NOT NAMED; [PF00924] Mechanosensitive ion channel 67.76 0.6322 34 Mapoly0048s0059 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [KOG1802] RNA helicase nonsense mRNA reducing factor (pNORF1); [PF13086] AAA domain; [PF13087] AAA domain 68.99 0.5848 35 Mapoly0002s0141 - 74.81 0.6531 36 Mapoly0062s0042 [GO:0015684] ferrous iron transport; [PF02421] Ferrous iron transport protein B; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [GO:0015093] ferrous iron transmembrane transporter activity; [GO:0016021] integral to membrane; [PTHR11702:SF4] NUCLEOLAR GTP-BINDING PROTEIN 1; [PF06858] Nucleolar GTP-binding protein 1 (NOG1); [GO:0005525] GTP binding 75.84 0.5974 37 Mapoly0142s0042 [PF01255] Putative undecaprenyl diphosphate synthase; [KOG1602] Cis-prenyltransferase; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR10291] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE 75.91 0.6119 38 Mapoly0102s0005 [PF06962] Putative rRNA methylase 78.04 0.6394 39 Mapoly0079s0067 [PF13450] NAD(P)-binding Rossmann-like domain; [PTHR16128] FAMILY NOT NAMED 78.97 0.6690 40 Mapoly0142s0043 [GO:0000287] magnesium ion binding; [GO:0016829] lyase activity; [PF03936] Terpene synthase family, metal binding domain; [GO:0010333] terpene synthase activity 82.25 0.6088 41 Mapoly0086s0024 [GO:0001522] pseudouridine synthesis; [GO:0031429] box H/ACA snoRNP complex; [GO:0042254] ribosome biogenesis; [K11128] H/ACA ribonucleoprotein complex subunit 1; [KOG3262] H/ACA small nucleolar RNP component GAR1; [PF04410] Gar1/Naf1 RNA binding region; [PTHR23237] NUCLEOLAR PROTEIN FAMILY A MEMBER 1 (SNORNP PROTEIN GAR1) 82.74 0.6315 42 Mapoly0005s0156 [GO:0005737] cytoplasm; [PF04055] Radical SAM superfamily; [PTHR30544] 23S RRNA METHYLTRANSFERASE; [GO:0008173] RNA methyltransferase activity; [GO:0003824] catalytic activity; [GO:0006364] rRNA processing; [GO:0051536] iron-sulfur cluster binding 83.39 0.6357 43 Mapoly0070s0058 [GO:0000287] magnesium ion binding; [GO:0004743] pyruvate kinase activity; [GO:0006096] glycolysis; [GO:0030955] potassium ion binding; [PF02887] Pyruvate kinase, alpha/beta domain; [PF00224] Pyruvate kinase, barrel domain; [K00873] pyruvate kinase [EC:2.7.1.40]; [KOG2323] Pyruvate kinase; [PTHR11817] PYRUVATE KINASE; [2.7.1.40] Pyruvate kinase. 84.50 0.5087 44 Mapoly0018s0004 [GO:0003723] RNA binding; [PTHR10724] S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; [K02945] small subunit ribosomal protein S1; [PF00575] S1 RNA binding domain 84.66 0.5048 45 Mapoly0155s0010 [KOG0319] WD40-repeat-containing subunit of the 18S rRNA processing complex; [PF08625] Utp13 specific WD40 associated domain; [PTHR19854:SF15] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [GO:0006364] rRNA processing; [K14555] U3 small nucleolar RNA-associated protein 13; [GO:0032040] small-subunit processome; [PTHR19854] TRANSDUCIN BETA-LIKE 3; [PF00400] WD domain, G-beta repeat 85.16 0.6551 46 Mapoly0022s0148 [PTHR23245] UNCHARACTERIZED; [PTHR23245:SF25] METHIONINE 10+ HOMOLOG; [PF02475] Met-10+ like-protein; [GO:0016740] transferase activity; [KOG2078] tRNA modification enzyme; [K07055] TatD-related deoxyribonuclease 88.74 0.5561 47 Mapoly0021s0085 [GO:0055114] oxidation-reduction process; [PF01266] FAD dependent oxidoreductase; [PF01494] FAD binding domain; [GO:0016491] oxidoreductase activity; [PTHR10617] ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE 90.29 0.6489 48 Mapoly0001s0215 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR15657:SF1] SUBFAMILY NOT NAMED; [PF08524] rRNA processing; [PTHR15657] UNCHARACTERIZED 92.95 0.5787 49 Mapoly0090s0039 [KOG4308] LRR-containing protein; [PF13516] Leucine Rich repeat; [PTHR24106] FAMILY NOT NAMED 95.14 0.6043 50 Mapoly0046s0081 [GO:0005524] ATP binding; [KOG0335] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 101.33 0.6430