Guide Gene
- Gene ID
- Mapoly0010s0013
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF04387] Protein tyrosine phosphatase-like protein, PTPLA; [KOG3187] Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg); [PTHR11035] PTPLA DOMAIN PROTEIN
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0010s0013 [PF04387] Protein tyrosine phosphatase-like protein, PTPLA; [KOG3187] Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg); [PTHR11035] PTPLA DOMAIN PROTEIN 0.00 1.0000 1 Mapoly0010s0011 [GO:0005737] cytoplasm; [GO:0006974] response to DNA damage stimulus; [GO:0006281] DNA repair; [PF03652] Uncharacterised protein family (UPF0081); [GO:0016788] hydrolase activity, acting on ester bonds; [3.1.-.-] Acting on ester bonds.; [GO:0006310] DNA recombination; [K07447] putative holliday junction resolvase [EC:3.1.-.-] 2.45 0.7481 2 Mapoly0021s0024 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE 4.24 0.6259 3 Mapoly0046s0116 [PF11326] Protein of unknown function (DUF3128) 6.93 0.6403 4 Mapoly0109s0052 [4.1.2.25] Dihydroneopterin aldolase.; [PTHR20941] FOLATE SYNTHESIS PROTEINS; [PF02152] Dihydroneopterin aldolase; [K01633] dihydroneopterin aldolase [EC:4.1.2.25]; [GO:0004150] dihydroneopterin aldolase activity; [GO:0006760] folic acid-containing compound metabolic process 8.49 0.6414 5 Mapoly0028s0045 - 11.83 0.6708 6 Mapoly0009s0223 [GO:0005524] ATP binding; [GO:0009396] folic acid-containing compound biosynthetic process; [PTHR10025] TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER; [PF01268] Formate--tetrahydrofolate ligase; [GO:0004329] formate-tetrahydrofolate ligase activity 21.63 0.5776 7 Mapoly0051s0110 [KOG2855] Ribokinase; [PF00294] pfkB family carbohydrate kinase; [PTHR10584] SUGAR KINASE 23.24 0.5961 8 Mapoly0018s0004 [GO:0003723] RNA binding; [PTHR10724] S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; [K02945] small subunit ribosomal protein S1; [PF00575] S1 RNA binding domain 23.92 0.5844 9 Mapoly0049s0058 [GO:0005515] protein binding; [K12880] THO complex subunit 3; [KOG1407] WD40 repeat protein; [PF00400] WD domain, G-beta repeat; [PTHR22839] THO COMPLEX SUBUNIT 3 (THO3) 24.82 0.6020 10 Mapoly0060s0029 [PF15370] Domain of unknown function (DUF4598) 27.93 0.6266 11 Mapoly0153s0003 [KOG3374] Cellular repressor of transcription; [PTHR13343] CREG1 PROTEIN; [PF13883] Pyridoxamine 5'-phosphate oxidase 35.20 0.5851 12 Mapoly0086s0024 [GO:0001522] pseudouridine synthesis; [GO:0031429] box H/ACA snoRNP complex; [GO:0042254] ribosome biogenesis; [K11128] H/ACA ribonucleoprotein complex subunit 1; [KOG3262] H/ACA small nucleolar RNP component GAR1; [PF04410] Gar1/Naf1 RNA binding region; [PTHR23237] NUCLEOLAR PROTEIN FAMILY A MEMBER 1 (SNORNP PROTEIN GAR1) 35.69 0.6237 13 Mapoly0056s0047 - 38.78 0.5696 14 Mapoly0022s0148 [PTHR23245] UNCHARACTERIZED; [PTHR23245:SF25] METHIONINE 10+ HOMOLOG; [PF02475] Met-10+ like-protein; [GO:0016740] transferase activity; [KOG2078] tRNA modification enzyme; [K07055] TatD-related deoxyribonuclease 39.37 0.5698 15 Mapoly0008s0219 - 47.62 0.6155 16 Mapoly0033s0149 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED 47.92 0.5967 17 Mapoly0013s0057 [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG3167] Box H/ACA snoRNP component, involved in ribosomal RNA pseudouridinylation; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; [K11129] H/ACA ribonucleoprotein complex subunit 2; [PTHR23105:SF12] NUCLEOLAR PROTEIN FAMILY A MEMBER 2 48.91 0.6197 18 Mapoly0006s0010 [PTHR21568] UNCHARACTERIZED; [KOG2364] Predicted pseudouridylate synthase 50.61 0.5969 19 Mapoly0052s0099 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR21428] FAMILY NOT NAMED; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [PF05983] MED7 protein; [KOG0570] Transcriptional coactivator 50.62 0.5592 20 Mapoly0010s0040 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family 50.84 0.5541 21 Mapoly0022s0147 [KOG1191] Mitochondrial GTPase; [PF01926] 50S ribosome-binding GTPase; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF14714] KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; [GO:0005525] GTP binding 53.48 0.6113 22 Mapoly0064s0065 [PF13656] RNA polymerase Rpb3/Rpb11 dimerisation domain; [PTHR13946:SF16] DNA-DIRECTED RNA POLYMERASE II 13.3 KDA POLYPEPTIDE; [PTHR13946] DNA-DIRECTED RNA POLYMERASE I,II,III; [KOG3438] DNA-directed RNA polymerase, subunit L; [2.7.7.6] DNA-directed RNA polymerase.; [K03020] DNA-directed RNA polymerases I and III subunit RPAC2 59.60 0.5970 23 Mapoly0048s0045 [GO:0006355] regulation of transcription, DNA-dependent; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR32467] FAMILY NOT NAMED 61.16 0.5683 24 Mapoly0080s0050 [GO:0003723] RNA binding; [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [GO:0006355] regulation of transcription, DNA-dependent; [PF01029] NusB family; [2.1.1.-] Methyltransferases.; [KOG1122] tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2); [PF01189] NOL1/NOP2/sun family; [K03500] ribosomal RNA small subunit methyltransferase B [EC:2.1.1.-] 63.77 0.5911 25 Mapoly0017s0003 [PTHR24012] FAMILY NOT NAMED; [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [K14411] RNA-binding protein Musashi; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 66.17 0.4879 26 Mapoly0101s0005 [K01883] cysteinyl-tRNA synthetase [EC:6.1.1.16]; [PTHR10890] CYSTEINYL-TRNA SYNTHETASE; [PF01406] tRNA synthetases class I (C) catalytic domain; [6.1.1.16] Cysteine--tRNA ligase.; [KOG2007] Cysteinyl-tRNA synthetase 66.69 0.5960 27 Mapoly0096s0074 [KOG2702] Predicted panthothenate kinase/uridine kinase-related protein; [PTHR10285] URIDINE KINASE; [PF13238] AAA domain 67.16 0.5451 28 Mapoly0012s0036 [PF01926] 50S ribosome-binding GTPase; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [GO:0005525] GTP binding 67.97 0.5690 29 Mapoly0017s0028 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [PTHR24055:SF0] SERINE/THREONINE-PROTEIN KINASE SRPK; [GO:0004672] protein kinase activity; [2.7.1.-] Phosphotransferases with an alcohol group as acceptor.; [PTHR24055] MITOGEN-ACTIVATED PROTEIN KINASE; [KOG1290] Serine/threonine protein kinase; [GO:0006468] protein phosphorylation; [K00924] phosphatidylinositol-4-phosphate 3-kinase [EC:2.7.1.154] 70.87 0.4833 30 Mapoly0037s0133 - 71.30 0.5834 31 Mapoly0102s0005 [PF06962] Putative rRNA methylase 72.12 0.5917 32 Mapoly0122s0019 [GO:0003723] RNA binding; [PTHR10631] N(2),N(2)-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE; [K00555] tRNA (guanine-N2-)-methyltransferase [EC:2.1.1.32]; [2.1.1.32] Transferred entry: 2.1.1.213, 2.1.1.214, 2.1.1.215 and 2.1.1.216.; [GO:0008033] tRNA processing; [PF02005] N2,N2-dimethylguanosine tRNA methyltransferase; [GO:0004809] tRNA (guanine-N2-)-methyltransferase activity 73.12 0.5760 33 Mapoly0018s0008 [K07976] Rab family, other; [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [KOG0087] GTPase Rab11/YPT3, small G protein superfamily; [PF00071] Ras family; [GO:0005525] GTP binding 73.28 0.4768 34 Mapoly0001s0215 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR15657:SF1] SUBFAMILY NOT NAMED; [PF08524] rRNA processing; [PTHR15657] UNCHARACTERIZED 75.83 0.5552 35 Mapoly0017s0001 [KOG1410] Nuclear transport receptor RanBP16 (importin beta superfamily); [PF03810] Importin-beta N-terminal domain; [PTHR12596] EXPORTIN 4,7-RELATED; [PTHR12596:SF2] EXPORTIN 7-RELATED / RAN BINDING PROTEIN 16,17; [GO:0006886] intracellular protein transport; [GO:0008536] Ran GTPase binding 77.15 0.4733 36 Mapoly0018s0010 - 77.46 0.4704 37 Mapoly0003s0118 [PTHR31389] FAMILY NOT NAMED 77.77 0.4598 38 Mapoly0017s0004 [K12890] splicing factor, arginine/serine-rich 1/9; [GO:0003676] nucleic acid binding; [PTHR10548] SPLICING FACTOR, ARGININE/SERINE-RICH; [KOG0105] Alternative splicing factor ASF/SF2 (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 78.35 0.4716 39 Mapoly0028s0030 [PF06228] Haem utilisation ChuX/HutX 79.49 0.5649 40 Mapoly0035s0109 [K00761] uracil phosphoribosyltransferase [EC:2.4.2.9]; [2.4.2.9] Uracil phosphoribosyltransferase.; [KOG1017] Predicted uracil phosphoribosyltransferase; [PTHR10285] URIDINE KINASE; [PF14681] Uracil phosphoribosyltransferase 79.60 0.5539 41 Mapoly0017s0020 [K12850] pre-mRNA-splicing factor 38B; [PF03371] PRP38 family; [PTHR23142] UNCHARACTERIZED; [KOG2888] Putative RNA binding protein 79.91 0.4692 42 Mapoly0017s0024 [K14497] protein phosphatase 2C [EC:3.1.3.16]; [KOG0698] Serine/threonine protein phosphatase; [PTHR13832] PROTEIN PHOSPHATASE 2C; [PF00481] Protein phosphatase 2C; [GO:0003824] catalytic activity; [3.1.3.16] Phosphoprotein phosphatase. 80.12 0.4682 43 Mapoly0017s0021 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [PTHR24349] SERINE/THREONINE-PROTEIN KINASE; [GO:0006468] protein phosphorylation; [KOG0032] Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding; [K13412] calcium-dependent protein kinase [EC:2.7.11.1] 80.50 0.4680 44 Mapoly0017s0006 [GO:0004871] signal transducer activity; [PF13426] PAS domain; [GO:0007165] signal transduction; [PTHR24351] RIBOSOMAL PROTEIN S6 KINASE 82.16 0.4669 45 Mapoly0017s0009 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR10071] TRANSCRIPTION FACTOR GATA (GATA BINDING FACTOR); [PF06203] CCT motif; [GO:0005515] protein binding; [GO:0043565] sequence-specific DNA binding; [GO:0008270] zinc ion binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF06200] tify domain; [PF00320] GATA zinc finger 83.89 0.4660 46 Mapoly0017s0019 [K02183] calmodulin; [PTHR31713] FAMILY NOT NAMED; [PF07887] Calmodulin binding protein-like 84.81 0.4645 47 Mapoly0018s0023 [KOG4522] RNA polymerase II transcription mediator; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR22795] SUPPRESSOR OF RNA POLYMERASE B SRB8-RELATED; [PF09497] Transcription mediator complex subunit Med12; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity 85.17 0.4638 48 Mapoly0018s0016 [GO:0016787] hydrolase activity; [KOG0648] Predicted NUDIX hydrolase FGF-2 and related proteins; [PTHR13994] NUDIX HYDROLASE RELATED; [PF00293] NUDIX domain 86.61 0.4610 49 Mapoly0018s0017 [K02183] calmodulin; [PTHR31713] FAMILY NOT NAMED; [PF07887] Calmodulin binding protein-like 86.79 0.4607 50 Mapoly0026s0057 [PTHR23417] 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE; [PF02390] Putative methyltransferase; [GO:0008176] tRNA (guanine-N7-)-methyltransferase activity; [K03439] tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]; [2.1.1.33] tRNA (guanine(46)-N(7))-methyltransferase.; [KOG3115] Methyltransferase-like protein; [GO:0006400] tRNA modification 87.50 0.5807