Guide Gene

Gene ID
Mapoly0153s0003
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG3374] Cellular repressor of transcription; [PTHR13343] CREG1 PROTEIN; [PF13883] Pyridoxamine 5'-phosphate oxidase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0153s0003 [KOG3374] Cellular repressor of transcription; [PTHR13343] CREG1 PROTEIN; [PF13883] Pyridoxamine 5'-phosphate oxidase 0.00 1.0000
1 Mapoly0035s0097 [KOG0295] WD40 repeat-containing protein; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat4.240.6258
2 Mapoly0109s0052 [4.1.2.25] Dihydroneopterin aldolase.; [PTHR20941] FOLATE SYNTHESIS PROTEINS; [PF02152] Dihydroneopterin aldolase; [K01633] dihydroneopterin aldolase [EC:4.1.2.25]; [GO:0004150] dihydroneopterin aldolase activity; [GO:0006760] folic acid-containing compound metabolic process4.240.6777
3 Mapoly0065s0065 [GO:0005840] ribosome; [PTHR11809] RIBOSOMAL PROTEIN L7/L12; [GO:0003735] structural constituent of ribosome; [KOG1715] Mitochondrial/chloroplast ribosomal protein L12; [GO:0005622] intracellular; [PF00542] Ribosomal protein L7/L12 C-terminal domain; [GO:0006412] translation7.350.7076
4 Mapoly0059s0035 -14.660.6556
5 Mapoly0046s0056 [GO:0009055] electron carrier activity; [KOG3309] Ferredoxin; [PF00111] 2Fe-2S iron-sulfur cluster binding domain; [GO:0051536] iron-sulfur cluster binding; [PTHR23426] FERREDOXIN/ADRENODOXIN16.060.6043
6 Mapoly0102s0045 [PF00571] CBS domain; [K00088] IMP dehydrogenase [EC:1.1.1.205]; [GO:0055114] oxidation-reduction process; [PTHR11911:SF6] INOSINE-5-MONOPHOSPHATE DEHYDROGENASE; [PTHR11911] INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED; [PF00478] IMP dehydrogenase / GMP reductase domain; [1.1.1.205] IMP dehydrogenase.; [GO:0003824] catalytic activity; [GO:0030554] adenyl nucleotide binding; [GO:0006164] purine nucleotide biosynthetic process; [KOG2550] IMP dehydrogenase/GMP reductase; [GO:0003938] IMP dehydrogenase activity19.600.6828
7 Mapoly0012s0185 [GO:0055114] oxidation-reduction process; [GO:0009396] folic acid-containing compound biosynthetic process; [GO:0004488] methylenetetrahydrofolate dehydrogenase (NADP+) activity; [PTHR10025] TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER; [PF02882] Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; [PF00763] Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; [GO:0003824] catalytic activity; [KOG0089] Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase20.490.6673
8 Mapoly0001s0215 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR15657:SF1] SUBFAMILY NOT NAMED; [PF08524] rRNA processing; [PTHR15657] UNCHARACTERIZED31.110.6240
9 Mapoly0086s0024 [GO:0001522] pseudouridine synthesis; [GO:0031429] box H/ACA snoRNP complex; [GO:0042254] ribosome biogenesis; [K11128] H/ACA ribonucleoprotein complex subunit 1; [KOG3262] H/ACA small nucleolar RNP component GAR1; [PF04410] Gar1/Naf1 RNA binding region; [PTHR23237] NUCLEOLAR PROTEIN FAMILY A MEMBER 1 (SNORNP PROTEIN GAR1)32.000.6511
10 Mapoly0052s0099 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR21428] FAMILY NOT NAMED; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [PF05983] MED7 protein; [KOG0570] Transcriptional coactivator32.080.5931
11 Mapoly0132s0028 [GO:0006260] DNA replication; [PTHR10302] SINGLE-STRANDED DNA-BINDING PROTEIN; [GO:0003697] single-stranded DNA binding; [KOG1653] Single-stranded DNA-binding protein; [PF00436] Single-strand binding protein family; [K03111] single-strand DNA-binding protein33.470.6530
12 Mapoly0026s0084 [GO:0003723] RNA binding; [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [KOG1596] Fibrillarin and related nucleolar RNA-binding proteins; [PF01269] Fibrillarin; [GO:0006364] rRNA processing; [GO:0008033] tRNA processing; [K14563] rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]; [PTHR10335] RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN34.730.6543
13 Mapoly0010s0013 [PF04387] Protein tyrosine phosphatase-like protein, PTPLA; [KOG3187] Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg); [PTHR11035] PTPLA DOMAIN PROTEIN35.200.5851
14 Mapoly0061s0086 -36.660.6230
15 Mapoly0040s0040 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3083] Prohibitin; [PF01145] SPFH domain / Band 7 family42.360.6396
16 Mapoly0015s0017 [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0042254] ribosome biogenesis; [GO:0005622] intracellular; [PF00466] Ribosomal protein L10; [KOG0816] Protein involved in mRNA turnover42.540.6466
17 Mapoly0108s0056 -42.710.6338
18 Mapoly0052s0007 [PTHR11080] PYRAZINAMIDASE/NICOTINAMIDASE; [PF00857] Isochorismatase family; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [KOG4003] Pyrazinamidase/nicotinamidase PNC142.810.5346
19 Mapoly0136s0025 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR31677] FAMILY NOT NAMED; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity42.990.5681
20 Mapoly0140s0011 [KOG3080] Nucleolar protein-like/EBNA1-binding protein; [PTHR13028] RRNA PROCESSING PROTEIN EBNA1-BINDING PROTEIN-RELATED; [PF05890] Eukaryotic rRNA processing protein EBP2; [PTHR13028:SF0] SUBFAMILY NOT NAMED43.950.6402
21 Mapoly0041s0149 [GO:0009113] purine nucleobase biosynthetic process; [PF02844] Phosphoribosylglycinamide synthetase, N domain; [PTHR10520] TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED; [PF01071] Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; [GO:0004637] phosphoribosylamine-glycine ligase activity; [K01945] phosphoribosylamine--glycine ligase [EC:6.3.4.13]; [PF02843] Phosphoribosylglycinamide synthetase, C domain; [6.3.4.13] Phosphoribosylamine--glycine ligase.52.740.6478
22 Mapoly0044s0007 [KOG2971] RNA-binding protein required for biogenesis of the ribosomal 60S subunit; [PTHR13634] RIBOSOME BIOGENESIS PROTEIN BRIX; [PF04427] Brix domain53.380.6464
23 Mapoly0058s0026 [PTHR13191] RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATED; [PF12923] Ribosomal RNA-processing protein 7 (RRP7); [K14545] ribosomal RNA-processing protein 758.330.6390
24 Mapoly0083s0018 [PTHR14110:SF2] gb def: Mitochondrial import inner membrane translocase subunit tim22 homolog; [PF02466] Tim17/Tim22/Tim23/Pmp24 family; [PTHR14110] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22; [PF00536] SAM domain (Sterile alpha motif)59.580.6224
25 Mapoly0064s0065 [PF13656] RNA polymerase Rpb3/Rpb11 dimerisation domain; [PTHR13946:SF16] DNA-DIRECTED RNA POLYMERASE II 13.3 KDA POLYPEPTIDE; [PTHR13946] DNA-DIRECTED RNA POLYMERASE I,II,III; [KOG3438] DNA-directed RNA polymerase, subunit L; [2.7.7.6] DNA-directed RNA polymerase.; [K03020] DNA-directed RNA polymerases I and III subunit RPAC259.610.6318
26 Mapoly0042s0071 [GO:0016787] hydrolase activity; [KOG3069] Peroxisomal NUDIX hydrolase; [PF00293] NUDIX domain; [PTHR12992] MUTT-NUDIX-RELATED59.790.5867
27 Mapoly0036s0028 [PF04939] Ribosome biogenesis regulatory protein (RRS1); [KOG1765] Regulator of ribosome synthesis; [GO:0042254] ribosome biogenesis; [GO:0005634] nucleus; [PTHR17602] RIBOSOME BIOGENESIS REGULATORY PROTEIN63.640.6359
28 Mapoly0010s0040 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family63.830.5658
29 Mapoly0037s0137 [PTHR10802] MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40; [GO:0005741] mitochondrial outer membrane; [PF01459] Eukaryotic porin; [GO:0055085] transmembrane transport; [K11518] mitochondrial import receptor subunit TOM40; [KOG3296] Translocase of outer mitochondrial membrane complex, subunit TOM40; [PTHR10802:SF2] MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM4064.000.6166
30 Mapoly0001s0328 -65.820.5857
31 Mapoly0012s0036 [PF01926] 50S ribosome-binding GTPase; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [GO:0005525] GTP binding67.530.5955
32 Mapoly0007s0280 [GO:0005737] cytoplasm; [KOG3677] RNA polymerase I-associated factor - PAF67; [GO:0003743] translation initiation factor activity; [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF10255] RNA polymerase I-associated factor PAF67; [PTHR13242] EUKARYOTIC TRANSLATION INITIATION FACTOR 368.370.6059
33 Mapoly0003s0273 [PF02769] AIR synthase related protein, C-terminal domain; [PTHR10520] TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED; [6.3.3.1] Phosphoribosylformylglycinamidine cyclo-ligase.; [K01933] phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]; [PF00586] AIR synthase related protein, N-terminal domain; [GO:0003824] catalytic activity; [PTHR10520:SF22] PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE68.920.6250
34 Mapoly0001s0084 [PF13424] Tetratricopeptide repeat; [PF13374] Tetratricopeptide repeat; [KOG1840] Kinesin light chain; [PTHR19959] KINESIN LIGHT CHAIN74.030.6244
35 Mapoly0007s0188 [PTHR10317] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E; [KOG2758] Translation initiation factor 3, subunit e (eIF-3e); [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [GO:0005515] protein binding; [K03250] translation initiation factor eIF-3 subunit 6; [PF09440] eIF3 subunit 6 N terminal domain; [PF01399] PCI domain; [GO:0005852] eukaryotic translation initiation factor 3 complex77.950.6168
36 Mapoly0008s0219 -78.000.6217
37 Mapoly0079s0015 [PTHR11778] SERYL-TRNA SYNTHETASE; [GO:0005524] ATP binding; [GO:0004828] serine-tRNA ligase activity; [K01875] seryl-tRNA synthetase [EC:6.1.1.11]; [GO:0005737] cytoplasm; [GO:0006434] seryl-tRNA aminoacylation; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [KOG2509] Seryl-tRNA synthetase; [PF02403] Seryl-tRNA synthetase N-terminal domain; [GO:0000166] nucleotide binding; [PTHR11778:SF0] SUBFAMILY NOT NAMED; [6.1.1.11] Serine--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity79.110.6244
38 Mapoly0013s0057 [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG3167] Box H/ACA snoRNP component, involved in ribosomal RNA pseudouridinylation; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; [K11129] H/ACA ribonucleoprotein complex subunit 2; [PTHR23105:SF12] NUCLEOLAR PROTEIN FAMILY A MEMBER 281.100.6230
39 Mapoly0153s0015 [3.6.5.3] Protein-synthesizing GTPase.; [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [KOG0460] Mitochondrial translation elongation factor Tu; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [K02358] elongation factor EF-Tu [EC:3.6.5.3]; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 281.460.6053
40 Mapoly0008s0051 -82.750.5577
41 Mapoly0107s0028 [GO:0008168] methyltransferase activity; [PF00590] Tetrapyrrole (Corrin/Porphyrin) Methylases; [PTHR10882:SF0] DIPHTHINE SYNTHASE; [GO:0008152] metabolic process; [PTHR10882] DIPHTHINE SYNTHASE; [2.1.1.98] Diphthine synthase.; [K00586] diphthine synthase [EC:2.1.1.98]; [KOG3123] Diphthine synthase86.260.6190
42 Mapoly0020s0151 [PTHR12934] 50S RIBOSOMAL PROTEIN L15; [PF00828] Ribosomal protein L18e/L15; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [GO:0006412] translation86.310.6075
43 Mapoly0108s0062 [K03016] DNA-directed RNA polymerases I, II, and III subunit RPABC3; [PTHR10917:SF0] DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3; [PTHR10917] DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3; [PF03870] RNA polymerase Rpb8; [KOG3400] RNA polymerase subunit 8; [GO:0006351] transcription, DNA-dependent86.450.5919
44 Mapoly0028s0114 [K14565] nucleolar protein 58; [PF01798] Putative snoRNA binding domain; [PF08060] NOSIC (NUC001) domain; [PTHR10894:SF1] NUCLEOLAR PROTEIN NOP56-RELATED; [PF08156] NOP5NT (NUC127) domain; [KOG2572] Ribosome biogenesis protein - Nop58p/Nop5p; [PTHR10894] NUCLEOLAR PROTEIN 5 (NUCLEOLAR PROTEIN NOP5)(NOP58)88.650.6195
45 Mapoly0054s0003 [K01409] O-sialoglycoprotein endopeptidase [EC:3.4.24.57]; [KOG2708] Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold); [PF00814] Glycoprotease family; [PTHR11735] O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; [3.4.24.57] O-sialoglycoprotein endopeptidase.; [PTHR11735:SF6] SUBFAMILY NOT NAMED89.800.6202
46 Mapoly0087s0082 [PF12298] Eukaryotic mitochondrial regulator protein90.070.5924
47 Mapoly0007s0029 [KOG3165] Predicted nucleic-acid-binding protein, contains PIN domain; [PF04900] Fcf1; [PTHR12416] UNCHARACTERIZED; [GO:0032040] small-subunit processome; [K14566] U3 small nucleolar RNA-associated protein 2492.030.6144
48 Mapoly0069s0009 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR22952] CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED; [PF00170] bZIP transcription factor; [K14432] ABA responsive element binding factor92.560.5291
49 Mapoly0096s0018 [KOG2467] Glycine/serine hydroxymethyltransferase; [GO:0006544] glycine metabolic process; [2.1.2.1] Glycine hydroxymethyltransferase.; [GO:0006563] L-serine metabolic process; [K00600] glycine hydroxymethyltransferase [EC:2.1.2.1]; [PF00464] Serine hydroxymethyltransferase; [GO:0004372] glycine hydroxymethyltransferase activity; [PTHR11680] SERINE HYDROXYMETHYLTRANSFERASE92.710.6001
50 Mapoly0001s0201 [GO:0005840] ribosome; [KOG3449] 60S acidic ribosomal protein P2; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [K02943] large subunit ribosomal protein LP2; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein94.200.6147
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