Guide Gene

Gene ID
Mapoly0018s0004
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003723] RNA binding; [PTHR10724] S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; [K02945] small subunit ribosomal protein S1; [PF00575] S1 RNA binding domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0018s0004 [GO:0003723] RNA binding; [PTHR10724] S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; [K02945] small subunit ribosomal protein S1; [PF00575] S1 RNA binding domain 0.00 1.0000
1 Mapoly0017s0028 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [PTHR24055:SF0] SERINE/THREONINE-PROTEIN KINASE SRPK; [GO:0004672] protein kinase activity; [2.7.1.-] Phosphotransferases with an alcohol group as acceptor.; [PTHR24055] MITOGEN-ACTIVATED PROTEIN KINASE; [KOG1290] Serine/threonine protein kinase; [GO:0006468] protein phosphorylation; [K00924] phosphatidylinositol-4-phosphate 3-kinase [EC:2.7.1.154]4.900.8264
2 Mapoly0010s0216 [PTHR31479] FAMILY NOT NAMED6.930.6644
3 Mapoly0017s0009 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR10071] TRANSCRIPTION FACTOR GATA (GATA BINDING FACTOR); [PF06203] CCT motif; [GO:0005515] protein binding; [GO:0043565] sequence-specific DNA binding; [GO:0008270] zinc ion binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF06200] tify domain; [PF00320] GATA zinc finger6.930.8145
4 Mapoly0017s0020 [K12850] pre-mRNA-splicing factor 38B; [PF03371] PRP38 family; [PTHR23142] UNCHARACTERIZED; [KOG2888] Putative RNA binding protein8.490.8132
5 Mapoly0018s0010 -9.800.8132
6 Mapoly0018s0008 [K07976] Rab family, other; [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [KOG0087] GTPase Rab11/YPT3, small G protein superfamily; [PF00071] Ras family; [GO:0005525] GTP binding10.950.8111
7 Mapoly0017s0019 [K02183] calmodulin; [PTHR31713] FAMILY NOT NAMED; [PF07887] Calmodulin binding protein-like12.000.8099
8 Mapoly0018s0021 [PF14570] RING/Ubox like zinc-binding domain; [PTHR12603:SF1] CCR4-NOT TRANSCRIPTION COMPLEX RELATED; [PTHR12603] CCR4-NOT TRANSCRIPTION COMPLEX RELATED12.960.8095
9 Mapoly0018s0016 [GO:0016787] hydrolase activity; [KOG0648] Predicted NUDIX hydrolase FGF-2 and related proteins; [PTHR13994] NUDIX HYDROLASE RELATED; [PF00293] NUDIX domain13.860.8092
10 Mapoly0017s0022 [PF11145] Protein of unknown function (DUF2921)14.700.8091
11 Mapoly0017s0021 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [PTHR24349] SERINE/THREONINE-PROTEIN KINASE; [GO:0006468] protein phosphorylation; [KOG0032] Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding; [K13412] calcium-dependent protein kinase [EC:2.7.11.1]15.490.8090
12 Mapoly0017s0006 [GO:0004871] signal transducer activity; [PF13426] PAS domain; [GO:0007165] signal transduction; [PTHR24351] RIBOSOMAL PROTEIN S6 KINASE16.250.8084
13 Mapoly0017s0001 [KOG1410] Nuclear transport receptor RanBP16 (importin beta superfamily); [PF03810] Importin-beta N-terminal domain; [PTHR12596] EXPORTIN 4,7-RELATED; [PTHR12596:SF2] EXPORTIN 7-RELATED / RAN BINDING PROTEIN 16,17; [GO:0006886] intracellular protein transport; [GO:0008536] Ran GTPase binding16.970.8079
14 Mapoly0017s0004 [K12890] splicing factor, arginine/serine-rich 1/9; [GO:0003676] nucleic acid binding; [PTHR10548] SPLICING FACTOR, ARGININE/SERINE-RICH; [KOG0105] Alternative splicing factor ASF/SF2 (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)17.660.8042
15 Mapoly0017s0024 [K14497] protein phosphatase 2C [EC:3.1.3.16]; [KOG0698] Serine/threonine protein phosphatase; [PTHR13832] PROTEIN PHOSPHATASE 2C; [PF00481] Protein phosphatase 2C; [GO:0003824] catalytic activity; [3.1.3.16] Phosphoprotein phosphatase.18.330.8037
16 Mapoly0017s0023 [PF11145] Protein of unknown function (DUF2921)18.970.8027
17 Mapoly0018s0023 [KOG4522] RNA polymerase II transcription mediator; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR22795] SUPPRESSOR OF RNA POLYMERASE B SRB8-RELATED; [PF09497] Transcription mediator complex subunit Med12; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity19.600.8017
18 Mapoly0017s0003 [PTHR24012] FAMILY NOT NAMED; [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [K14411] RNA-binding protein Musashi; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)20.200.7986
19 Mapoly0018s0014 -20.780.7959
20 Mapoly0018s0017 [K02183] calmodulin; [PTHR31713] FAMILY NOT NAMED; [PF07887] Calmodulin binding protein-like21.350.7945
21 Mapoly0018s0011 [PTHR31421] FAMILY NOT NAMED; [PF06217] GAGA binding protein-like family21.910.7895
22 Mapoly0018s0002 [PF13418] Galactose oxidase, central domain; [PF13415] Galactose oxidase, central domain; [PTHR11668] SERINE/THREONINE PROTEIN PHOSPHATASE; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [KOG0374] Serine/threonine specific protein phosphatase PP1, catalytic subunit22.450.7879
23 Mapoly0017s0012 -22.980.7829
24 Mapoly0018s0001 [GO:0006355] regulation of transcription, DNA-dependent; [KOG0627] Heat shock transcription factor; [PF00447] HSF-type DNA-binding; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0009408] response to heat; [PTHR10015] HEAT SHOCK TRANSCRIPTION FACTOR23.490.7658
25 Mapoly0010s0013 [PF04387] Protein tyrosine phosphatase-like protein, PTPLA; [KOG3187] Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg); [PTHR11035] PTPLA DOMAIN PROTEIN23.920.5844
26 Mapoly0058s0120 [PF12937] F-box-like; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN25.980.6335
27 Mapoly0010s0100 [PTHR11614] PHOSPHOLIPASE-RELATED; [KOG1455] Lysophospholipase; [PF12695] Alpha/beta hydrolase family27.350.4832
28 Mapoly0009s0223 [GO:0005524] ATP binding; [GO:0009396] folic acid-containing compound biosynthetic process; [PTHR10025] TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER; [PF01268] Formate--tetrahydrofolate ligase; [GO:0004329] formate-tetrahydrofolate ligase activity28.930.5651
29 Mapoly0070s0009 [PTHR11624] DEHYDROGENASE RELATED; [K01662] 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]; [GO:0008661] 1-deoxy-D-xylulose-5-phosphate synthase activity; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [GO:0003824] catalytic activity; [2.2.1.7] 1-deoxy-D-xylulose-5-phosphate synthase.; [PF13292] 1-deoxy-D-xylulose-5-phosphate synthase; [PF02780] Transketolase, C-terminal domain; [GO:0016114] terpenoid biosynthetic process; [KOG0523] Transketolase43.270.4957
30 Mapoly0448s0001 [PF00280] Potato inhibitor I family; [GO:0009611] response to wounding; [GO:0004867] serine-type endopeptidase inhibitor activity45.300.4741
31 Mapoly0056s0001 [PF13855] Leucine rich repeat; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [PF00560] Leucine Rich Repeat; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE; [KOG0472] Leucine-rich repeat protein71.620.3961
32 Mapoly0183s0001 [PTHR24322] FAMILY NOT NAMED; [KOG0725] Reductases with broad range of substrate specificities; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase78.580.4594
33 Mapoly0019s0116 [K12449] UDP-apiose/xylose synthase; [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [KOG1429] dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE81.060.4829
34 Mapoly0048s0045 [GO:0006355] regulation of transcription, DNA-dependent; [PF00847] AP2 domain; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR32467] FAMILY NOT NAMED84.660.5048
35 Mapoly0144s0017 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PF00139] Legume lectin domain; [GO:0030246] carbohydrate binding; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE85.980.4980
36 Mapoly0010s0011 [GO:0005737] cytoplasm; [GO:0006974] response to DNA damage stimulus; [GO:0006281] DNA repair; [PF03652] Uncharacterised protein family (UPF0081); [GO:0016788] hydrolase activity, acting on ester bonds; [3.1.-.-] Acting on ester bonds.; [GO:0006310] DNA recombination; [K07447] putative holliday junction resolvase [EC:3.1.-.-]86.950.5295
37 Mapoly0042s0048 [GO:0016020] membrane; [GO:0005524] ATP binding; [PF08370] Plant PDR ABC transporter associated; [GO:0016887] ATPase activity; [PTHR19241] ATP-BINDING CASSETTE TRANSPORTER; [PF01061] ABC-2 type transporter; [PF14510] ABC-transporter extracellular N-terminal; [KOG0065] Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily; [PF00005] ABC transporter88.740.4961
38 Mapoly0307s0001 [PF03330] Rare lipoprotein A (RlpA)-like double-psi beta-barrel; [GO:0008061] chitin binding; [PTHR22595] CHITINASE-RELATED; [PF00187] Chitin recognition protein118.500.5089
39 Mapoly0119s0021 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain122.330.5176
40 Mapoly0397s0001 [PTHR22731] RIBONUCLEASE P/MRP SUBUNIT131.540.3776
41 Mapoly0142s0042 [PF01255] Putative undecaprenyl diphosphate synthase; [KOG1602] Cis-prenyltransferase; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR10291] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE132.070.4901
42 Mapoly0142s0043 [GO:0000287] magnesium ion binding; [GO:0016829] lyase activity; [PF03936] Terpene synthase family, metal binding domain; [GO:0010333] terpene synthase activity133.500.4887
43 Mapoly0090s0039 [KOG4308] LRR-containing protein; [PF13516] Leucine Rich repeat; [PTHR24106] FAMILY NOT NAMED134.650.4933
44 Mapoly0003s0277 [PTHR31642] FAMILY NOT NAMED; [K13065] shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [PF02458] Transferase family; [2.3.1.133] Shikimate O-hydroxycinnamoyltransferase.139.430.4877
45 Mapoly0002s0287 [KOG0039] Ferric reductase, NADH/NADPH oxidase and related proteins; [PF08022] FAD-binding domain; [GO:0055114] oxidation-reduction process; [PTHR11972] NADPH OXIDASE; [PF01794] Ferric reductase like transmembrane component; [GO:0016491] oxidoreductase activity; [PTHR11972:SF5] RESPIRATORY BURST OXIDASE; [PF08030] Ferric reductase NAD binding domain142.600.4634
46 Mapoly0008s0175 [PF00190] Cupin; [GO:0045735] nutrient reservoir activity; [PTHR31238] FAMILY NOT NAMED158.190.4472
47 Mapoly0042s0124 -158.310.4575
48 Mapoly0010s0033 [GO:0008168] methyltransferase activity; [PF03492] SAM dependent carboxyl methyltransferase; [PTHR31009] S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN161.420.3685
49 Mapoly0004s0263 [PF13855] Leucine rich repeat; [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF13516] Leucine Rich repeat; [PF00069] Protein kinase domain; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE161.570.4355
50 Mapoly0073s0076 [KOG0409] Predicted dehydrogenase; [GO:0055114] oxidation-reduction process; [PF03446] NAD binding domain of 6-phosphogluconate dehydrogenase; [PTHR22981] 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED; [GO:0004616] phosphogluconate dehydrogenase (decarboxylating) activity; [GO:0051287] NAD binding; [GO:0006098] pentose-phosphate shunt; [PF14833] NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase167.870.4852
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