Guide Gene
- Gene ID
- Mapoly0001s0232
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0005840] ribosome; [KOG1624] Mitochondrial/chloroplast ribosomal protein L4; [GO:0003735] structural constituent of ribosome; [PF00573] Ribosomal protein L4/L1 family; [PTHR10746] 50S RIBOSOMAL PROTEIN L4; [GO:0006412] translation
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0001s0232 [GO:0005840] ribosome; [KOG1624] Mitochondrial/chloroplast ribosomal protein L4; [GO:0003735] structural constituent of ribosome; [PF00573] Ribosomal protein L4/L1 family; [PTHR10746] 50S RIBOSOMAL PROTEIN L4; [GO:0006412] translation 0.00 1.0000 1 Mapoly0065s0007 [PTHR12934] 50S RIBOSOMAL PROTEIN L15; [KOG0846] Mitochondrial/chloroplast ribosomal protein L15/L10; [PF00828] Ribosomal protein L18e/L15; [GO:0003735] structural constituent of ribosome; [PTHR12934:SF2] 50S RIBOSOMAL PROTEIN L15; [GO:0015934] large ribosomal subunit; [GO:0006412] translation; [K02876] large subunit ribosomal protein L15 2.00 0.9595 2 Mapoly0043s0143 [PF00687] Ribosomal protein L1p/L10e family; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG1569] 50S ribosomal protein L1 2.45 0.9398 3 Mapoly0132s0032 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] 6.24 0.8931 4 Mapoly0030s0067 [PF00550] Phosphopantetheine attachment site; [PTHR20863] ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED 6.93 0.9147 5 Mapoly0040s0099 [6.6.1.1] Magnesium chelatase.; [GO:0016851] magnesium chelatase activity; [PF01078] Magnesium chelatase, subunit ChlI; [GO:0015995] chlorophyll biosynthetic process; [K03405] magnesium chelatase subunit I [EC:6.6.1.1]; [GO:0015979] photosynthesis 6.93 0.9316 6 Mapoly0103s0078 [GO:0006779] porphyrin-containing compound biosynthetic process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [KOG2872] Uroporphyrinogen decarboxylase; [PF01208] Uroporphyrinogen decarboxylase (URO-D); [GO:0004853] uroporphyrinogen decarboxylase activity 7.07 0.9254 7 Mapoly0061s0126 - 7.42 0.9230 8 Mapoly0005s0034 [GO:0005840] ribosome; [KOG4607] Mitochondrial ribosomal protein L9; [GO:0003735] structural constituent of ribosome; [PF03948] Ribosomal protein L9, C-terminal domain; [PF01281] Ribosomal protein L9, N-terminal domain; [PTHR21368] 50S RIBOSOMAL PROTEIN L9; [GO:0005622] intracellular; [K02939] large subunit ribosomal protein L9; [GO:0006412] translation 7.94 0.9395 9 Mapoly0113s0009 [PF12638] Staygreen protein; [PTHR31750] FAMILY NOT NAMED 8.25 0.9131 10 Mapoly0007s0262 [GO:0005840] ribosome; [PF01245] Ribosomal protein L19; [KOG1698] Mitochondrial/chloroplast ribosomal protein L19; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR15680] RIBOSOMAL PROTEIN L19; [GO:0006412] translation 9.38 0.9335 11 Mapoly0024s0090 [PF00089] Trypsin; [PTHR22939] SERINE PROTEASE FAMILY S1C HTRA-RELATED; [GO:0005515] protein binding; [PF13180] PDZ domain; [KOG1320] Serine protease; [GO:0004252] serine-type endopeptidase activity; [GO:0006508] proteolysis 11.62 0.9265 12 Mapoly0034s0091 - 11.83 0.9330 13 Mapoly0059s0075 - 12.00 0.9048 14 Mapoly0033s0078 [GO:0016020] membrane; [PTHR10906:SF2] PROTEIN TRANSLOCASE SECY SUBUNIT; [PF00344] SecY translocase; [GO:0015031] protein transport; [K10956] protein transport protein SEC61 subunit alpha; [PTHR10906] SECY/SEC61-ALPHA FAMILY MEMBER 12.85 0.9148 15 Mapoly0005s0157 - 12.96 0.9315 16 Mapoly0157s0020 [GO:0015031] protein transport; [GO:0006457] protein folding; [PF05698] Bacterial trigger factor protein (TF) C-terminus; [PF05697] Bacterial trigger factor protein (TF); [PTHR30560] TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 14.49 0.9163 17 Mapoly0013s0204 [GO:0005840] ribosome; [PTHR14413] RIBOSOMAL PROTEIN L17; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01196] Ribosomal protein L17; [KOG3280] Mitochondrial/chloroplast ribosomal protein L17; [K02879] large subunit ribosomal protein L17; [GO:0006412] translation 17.66 0.9266 18 Mapoly0082s0064 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding 17.97 0.9123 19 Mapoly0042s0009 [PTHR24012] FAMILY NOT NAMED; [KOG0131] Splicing factor 3b, subunit 4; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18.17 0.8964 20 Mapoly0020s0094 - 18.57 0.9066 21 Mapoly0086s0032 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02835] peptide chain release factor RF-1; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity 20.98 0.8931 22 Mapoly0112s0034 [KOG1270] Methyltransferases; [GO:0046406] magnesium protoporphyrin IX methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [2.1.1.11] Magnesium protoporphyrin IX methyltransferase.; [GO:0015995] chlorophyll biosynthetic process; [PF07109] Magnesium-protoporphyrin IX methyltransferase C-terminus; [PTHR10108:SF269] BLL8020 PROTEIN; [K03428] magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11] 23.07 0.9006 23 Mapoly0004s0031 - 23.11 0.8593 24 Mapoly0036s0041 [PF11833] Protein of unknown function (DUF3353) 23.37 0.8649 25 Mapoly0007s0166 [GO:0005840] ribosome; [KOG1753] 40S ribosomal protein S16; [K02996] small subunit ribosomal protein S9; [GO:0003735] structural constituent of ribosome; [PF00380] Ribosomal protein S9/S16; [PTHR21569] RIBOSOMAL PROTEIN S9; [GO:0006412] translation 23.64 0.9180 26 Mapoly0020s0149 [PTHR32010] FAMILY NOT NAMED; [PF14870] Photosynthesis system II assembly factor YCF48 23.92 0.9066 27 Mapoly0136s0003 [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [GO:0000166] nucleotide binding; [PTHR11702:SF20] GTP-BINDING PROTEIN; [PF09269] Domain of unknown function (DUF1967); [PF01018] GTP1/OBG; [KOG1489] Predicted GTP-binding protein (ODN superfamily); [GO:0005525] GTP binding 24.00 0.8862 28 Mapoly0065s0095 [K01698] porphobilinogen synthase [EC:4.2.1.24]; [PTHR11458:SF0] SUBFAMILY NOT NAMED; [PF00490] Delta-aminolevulinic acid dehydratase; [4.2.1.24] Porphobilinogen synthase.; [GO:0046872] metal ion binding; [KOG2794] Delta-aminolevulinic acid dehydratase; [GO:0033014] tetrapyrrole biosynthetic process; [PTHR11458] PORPHOBILINOGEN SYNTHASE; [GO:0004655] porphobilinogen synthase activity 24.37 0.9009 29 Mapoly0005s0220 [3.6.5.3] Protein-synthesizing GTPase.; [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [KOG0460] Mitochondrial translation elongation factor Tu; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [K02358] elongation factor EF-Tu [EC:3.6.5.3]; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2 24.45 0.9017 30 Mapoly0003s0135 [GO:0005524] ATP binding; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [PTHR19211:SF7] ABC TRANSPORTER ABCF3, UUP; [KOG0927] Predicted transporter (ABC superfamily); [PF12848] ABC transporter; [PF00005] ABC transporter 24.49 0.9001 31 Mapoly0056s0036 [PTHR20935] PHOSPHOGLYCERATE MUTASE-RELATED; [PF00300] Histidine phosphatase superfamily (branch 1) 24.68 0.8598 32 Mapoly0005s0040 [PF02978] Signal peptide binding domain; [GO:0048500] signal recognition particle; [PF00448] SRP54-type protein, GTPase domain; [GO:0008312] 7S RNA binding; [K03106] signal recognition particle subunit SRP54; [KOG0780] Signal recognition particle, subunit Srp54; [GO:0003924] GTPase activity; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PTHR11564:SF7] SIGNAL RECOGNITION PARTICLE PROTEIN; [PF02881] SRP54-type protein, helical bundle domain; [GO:0005525] GTP binding; [PTHR11564] GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS 27.02 0.8672 33 Mapoly0050s0006 [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF00675] Insulinase (Peptidase family M16); [KOG2067] Mitochondrial processing peptidase, alpha subunit 27.17 0.8417 34 Mapoly0006s0176 [GO:0005840] ribosome; [PTHR11545:SF2] 50S RIBOSOMAL PROTEIN L13; [GO:0003735] structural constituent of ribosome; [KOG3203] Mitochondrial/chloroplast ribosomal protein L13; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L13; [K02871] large subunit ribosomal protein L13 27.28 0.9195 35 Mapoly0009s0214 [PF05421] Protein of unknown function (DUF751) 28.27 0.8863 36 Mapoly0088s0012 - 29.50 0.9003 37 Mapoly0137s0001 [GO:0004830] tryptophan-tRNA ligase activity; [6.1.1.2] Tryptophan--tRNA ligase.; [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [K01867] tryptophanyl-tRNA synthetase [EC:6.1.1.2]; [GO:0006436] tryptophanyl-tRNA aminoacylation; [GO:0006418] tRNA aminoacylation for protein translation; [KOG2713] Mitochondrial tryptophanyl-tRNA synthetase; [PTHR10055] TRYPTOPHANYL-TRNA SYNTHETASE; [GO:0004812] aminoacyl-tRNA ligase activity 29.58 0.8944 38 Mapoly0005s0275 [GO:0005840] ribosome; [PF00297] Ribosomal protein L3; [GO:0003735] structural constituent of ribosome; [PTHR11229] 50S RIBOSOMAL PROTEIN L3; [GO:0005622] intracellular; [K02906] large subunit ribosomal protein L3; [KOG3141] Mitochondrial/chloroplast ribosomal protein L3; [GO:0006412] translation 29.70 0.9129 39 Mapoly0112s0045 [GO:0004659] prenyltransferase activity; [K02548] 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]; [PTHR13929] 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE; [GO:0016021] integral to membrane; [2.5.1.74] 1,4-dihydroxy-2-naphthoate polyprenyltransferase.; [KOG4581] Predicted membrane protein; [PF01040] UbiA prenyltransferase family 30.50 0.8742 40 Mapoly0184s0020 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [KOG0880] Peptidyl-prolyl cis-trans isomerase 30.51 0.8833 41 Mapoly0153s0005 [PF06485] Protein of unknown function (DUF1092) 32.31 0.8943 42 Mapoly0118s0023 - 32.53 0.8866 43 Mapoly0031s0030 [PF02575] YbaB/EbfC DNA-binding family 32.86 0.8672 44 Mapoly0040s0096 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [K02717] photosystem II oxygen-evolving enhancer protein 2; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis 34.35 0.9077 45 Mapoly0024s0117 - 34.74 0.8677 46 Mapoly0125s0036 [PF11833] Protein of unknown function (DUF3353) 36.52 0.8752 47 Mapoly0041s0035 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit 37.52 0.8965 48 Mapoly0039s0053 [GO:0055114] oxidation-reduction process; [GO:0006779] porphyrin-containing compound biosynthetic process; [K00228] coproporphyrinogen III oxidase [EC:1.3.3.3]; [PF01218] Coproporphyrinogen III oxidase; [PTHR10755] COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL; [1.3.3.3] Coproporphyrinogen oxidase.; [GO:0004109] coproporphyrinogen oxidase activity; [PTHR10755:SF0] COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL; [KOG1518] Coproporphyrinogen III oxidase CPO/HEM13 37.79 0.8958 49 Mapoly0016s0172 [PF01370] NAD dependent epimerase/dehydratase family; [GO:0003824] catalytic activity; [GO:0050662] coenzyme binding; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE 38.95 0.8908 50 Mapoly0013s0203 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [PTHR24089:SF45] SUBFAMILY NOT NAMED; [KOG0768] Mitochondrial carrier protein PET8 39.12 0.8498