Guide Gene

Gene ID
Mapoly0065s0007
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR12934] 50S RIBOSOMAL PROTEIN L15; [KOG0846] Mitochondrial/chloroplast ribosomal protein L15/L10; [PF00828] Ribosomal protein L18e/L15; [GO:0003735] structural constituent of ribosome; [PTHR12934:SF2] 50S RIBOSOMAL PROTEIN L15; [GO:0015934] large ribosomal subunit; [GO:0006412] translation; [K02876] large subunit ribosomal protein L15

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0065s0007 [PTHR12934] 50S RIBOSOMAL PROTEIN L15; [KOG0846] Mitochondrial/chloroplast ribosomal protein L15/L10; [PF00828] Ribosomal protein L18e/L15; [GO:0003735] structural constituent of ribosome; [PTHR12934:SF2] 50S RIBOSOMAL PROTEIN L15; [GO:0015934] large ribosomal subunit; [GO:0006412] translation; [K02876] large subunit ribosomal protein L15 0.00 1.0000
1 Mapoly0005s0034 [GO:0005840] ribosome; [KOG4607] Mitochondrial ribosomal protein L9; [GO:0003735] structural constituent of ribosome; [PF03948] Ribosomal protein L9, C-terminal domain; [PF01281] Ribosomal protein L9, N-terminal domain; [PTHR21368] 50S RIBOSOMAL PROTEIN L9; [GO:0005622] intracellular; [K02939] large subunit ribosomal protein L9; [GO:0006412] translation1.730.9716
2 Mapoly0001s0232 [GO:0005840] ribosome; [KOG1624] Mitochondrial/chloroplast ribosomal protein L4; [GO:0003735] structural constituent of ribosome; [PF00573] Ribosomal protein L4/L1 family; [PTHR10746] 50S RIBOSOMAL PROTEIN L4; [GO:0006412] translation2.000.9595
3 Mapoly0034s0091 -3.740.9676
4 Mapoly0030s0067 [PF00550] Phosphopantetheine attachment site; [PTHR20863] ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED4.120.9375
5 Mapoly0013s0204 [GO:0005840] ribosome; [PTHR14413] RIBOSOMAL PROTEIN L17; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01196] Ribosomal protein L17; [KOG3280] Mitochondrial/chloroplast ribosomal protein L17; [K02879] large subunit ribosomal protein L17; [GO:0006412] translation6.480.9634
6 Mapoly0050s0098 [GO:0016020] membrane; [PF02325] YGGT family; [K02221] YggT family protein7.750.9394
7 Mapoly0024s0090 [PF00089] Trypsin; [PTHR22939] SERINE PROTEASE FAMILY S1C HTRA-RELATED; [GO:0005515] protein binding; [PF13180] PDZ domain; [KOG1320] Serine protease; [GO:0004252] serine-type endopeptidase activity; [GO:0006508] proteolysis8.490.9444
8 Mapoly0031s0030 [PF02575] YbaB/EbfC DNA-binding family9.700.9016
9 Mapoly0005s0275 [GO:0005840] ribosome; [PF00297] Ribosomal protein L3; [GO:0003735] structural constituent of ribosome; [PTHR11229] 50S RIBOSOMAL PROTEIN L3; [GO:0005622] intracellular; [K02906] large subunit ribosomal protein L3; [KOG3141] Mitochondrial/chloroplast ribosomal protein L3; [GO:0006412] translation9.800.9531
10 Mapoly0115s0051 [GO:0042254] ribosome biogenesis; [PTHR11560] FAMILY NOT NAMED; [GO:0005622] intracellular; [PF00466] Ribosomal protein L10; [PTHR11560:SF8] SUBFAMILY NOT NAMED10.720.9564
11 Mapoly0007s0262 [GO:0005840] ribosome; [PF01245] Ribosomal protein L19; [KOG1698] Mitochondrial/chloroplast ribosomal protein L19; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR15680] RIBOSOMAL PROTEIN L19; [GO:0006412] translation12.410.9447
12 Mapoly0008s0189 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [K02988] small subunit ribosomal protein S5; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [KOG0877] 40S ribosomal protein S2/30S ribosomal protein S5; [GO:0006412] translation; [PF03719] Ribosomal protein S5, C-terminal domain12.650.9513
13 Mapoly0090s0063 [GO:0005840] ribosome; [PF01165] Ribosomal protein S21; [PTHR21109:SF0] SUBFAMILY NOT NAMED; [PTHR21109] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation13.080.9493
14 Mapoly0006s0176 [GO:0005840] ribosome; [PTHR11545:SF2] 50S RIBOSOMAL PROTEIN L13; [GO:0003735] structural constituent of ribosome; [KOG3203] Mitochondrial/chloroplast ribosomal protein L13; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L13; [K02871] large subunit ribosomal protein L1313.490.9529
15 Mapoly0084s0078 [PF01926] 50S ribosome-binding GTPase; [KOG1491] Predicted GTP-binding protein (ODN superfamily); [PF06071] Protein of unknown function (DUF933); [K06942] ribosomal RNA large subunit methyltransferase N [EC:2.1.1.-]; [PTHR23305] GTP-BINDING PROTEIN-RELATED; [GO:0005525] GTP binding14.070.8889
16 Mapoly0007s0166 [GO:0005840] ribosome; [KOG1753] 40S ribosomal protein S16; [K02996] small subunit ribosomal protein S9; [GO:0003735] structural constituent of ribosome; [PF00380] Ribosomal protein S9/S16; [PTHR21569] RIBOSOMAL PROTEIN S9; [GO:0006412] translation14.140.9465
17 Mapoly0056s0036 [PTHR20935] PHOSPHOGLYCERATE MUTASE-RELATED; [PF00300] Histidine phosphatase superfamily (branch 1)15.170.8666
18 Mapoly0024s0117 -15.200.8825
19 Mapoly0005s0040 [PF02978] Signal peptide binding domain; [GO:0048500] signal recognition particle; [PF00448] SRP54-type protein, GTPase domain; [GO:0008312] 7S RNA binding; [K03106] signal recognition particle subunit SRP54; [KOG0780] Signal recognition particle, subunit Srp54; [GO:0003924] GTPase activity; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PTHR11564:SF7] SIGNAL RECOGNITION PARTICLE PROTEIN; [PF02881] SRP54-type protein, helical bundle domain; [GO:0005525] GTP binding; [PTHR11564] GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS16.520.8784
20 Mapoly0040s0099 [6.6.1.1] Magnesium chelatase.; [GO:0016851] magnesium chelatase activity; [PF01078] Magnesium chelatase, subunit ChlI; [GO:0015995] chlorophyll biosynthetic process; [K03405] magnesium chelatase subunit I [EC:6.6.1.1]; [GO:0015979] photosynthesis17.750.9261
21 Mapoly0047s0137 -17.890.9174
22 Mapoly0039s0053 [GO:0055114] oxidation-reduction process; [GO:0006779] porphyrin-containing compound biosynthetic process; [K00228] coproporphyrinogen III oxidase [EC:1.3.3.3]; [PF01218] Coproporphyrinogen III oxidase; [PTHR10755] COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL; [1.3.3.3] Coproporphyrinogen oxidase.; [GO:0004109] coproporphyrinogen oxidase activity; [PTHR10755:SF0] COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL; [KOG1518] Coproporphyrinogen III oxidase CPO/HEM1318.970.9223
23 Mapoly0040s0096 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [K02717] photosystem II oxygen-evolving enhancer protein 2; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis19.000.9337
24 Mapoly0001s0334 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [PF00281] Ribosomal protein L5; [PTHR11994:SF4] 50S RIBOSOMAL PROTEIN L5; [K02931] large subunit ribosomal protein L5; [GO:0006412] translation; [KOG0398] Mitochondrial/chloroplast ribosomal protein L5/L7; [PTHR11994] 60S RIBOSOMAL PROTEIN L11-RELATED; [PF00673] ribosomal L5P family C-terminus19.080.9434
25 Mapoly0041s0035 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit19.080.9217
26 Mapoly0042s0009 [PTHR24012] FAMILY NOT NAMED; [KOG0131] Splicing factor 3b, subunit 4; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)19.180.9018
27 Mapoly0036s0041 [PF11833] Protein of unknown function (DUF3353)19.600.8745
28 Mapoly0043s0143 [PF00687] Ribosomal protein L1p/L10e family; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG1569] 50S ribosomal protein L120.070.9189
29 Mapoly0042s0085 [GO:0016020] membrane; [GO:0009523] photosystem II; [GO:0009654] oxygen evolving complex; [K08903] photosystem II 13kDa protein; [PF03912] Psb28 protein; [GO:0015979] photosynthesis20.900.9239
30 Mapoly0134s0004 [PTHR15020] FLAVIN REDUCTASE-RELATED; [PF13460] NADH(P)-binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase21.000.8987
31 Mapoly0125s0036 [PF11833] Protein of unknown function (DUF3353)21.350.8942
32 Mapoly0170s0017 -21.820.9414
33 Mapoly0133s0011 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process23.450.9248
34 Mapoly0086s0004 [PF10674] Protein of unknown function (DUF2488)23.560.9109
35 Mapoly0026s0019 [GO:0005840] ribosome; [PF04839] Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65); [GO:0003735] structural constituent of ribosome; [GO:0006412] translation23.620.9346
36 Mapoly0001s0161 [GO:0005840] ribosome; [PF00416] Ribosomal protein S13/S18; [GO:0003723] RNA binding; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3311] Ribosomal protein S18; [PTHR10871] 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18; [GO:0006412] translation24.980.9381
37 Mapoly0088s0012 -27.820.9053
38 Mapoly0051s0056 [GO:0005840] ribosome; [PF01197] Ribosomal protein L31; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation28.980.9290
39 Mapoly0009s0214 [PF05421] Protein of unknown function (DUF751)29.070.8893
40 Mapoly0191s0001 [GO:0003723] RNA binding; [GO:0003746] translation elongation factor activity; [GO:0006414] translational elongation; [GO:0005515] protein binding; [PTHR11741] ELONGATION FACTOR TS; [PTHR11741:SF1] gb def: putative mitochondrial elongation factor ts [schizosaccharomyces pombe]; [PF00575] S1 RNA binding domain; [GO:0005622] intracellular; [PF00627] UBA/TS-N domain; [PF00889] Elongation factor TS; [KOG1071] Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt29.950.9084
41 Mapoly0103s0078 [GO:0006779] porphyrin-containing compound biosynthetic process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [KOG2872] Uroporphyrinogen decarboxylase; [PF01208] Uroporphyrinogen decarboxylase (URO-D); [GO:0004853] uroporphyrinogen decarboxylase activity30.200.8995
42 Mapoly0027s0042 [GO:0005840] ribosome; [PF01632] Ribosomal protein L35; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation30.410.9220
43 Mapoly0027s0106 [PTHR11177] CHITINASE30.660.8770
44 Mapoly0006s0110 [PTHR24151] FAMILY NOT NAMED; [PF13857] Ankyrin repeats (many copies)30.740.9207
45 Mapoly0157s0020 [GO:0015031] protein transport; [GO:0006457] protein folding; [PF05698] Bacterial trigger factor protein (TF) C-terminus; [PF05697] Bacterial trigger factor protein (TF); [PTHR30560] TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE31.080.9058
46 Mapoly0008s0037 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding32.450.8820
47 Mapoly0001s0431 -33.760.8667
48 Mapoly0005s0157 -33.760.9197
49 Mapoly0111s0026 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [K03768] peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]; [5.2.1.8] Peptidylprolyl isomerase.; [KOG0880] Peptidyl-prolyl cis-trans isomerase33.820.8558
50 Mapoly0132s0032 [PTHR31262] FAMILY NOT NAMED; [4.1.1.39] Ribulose-bisphosphate carboxylase.; [PF00101] Ribulose bisphosphate carboxylase, small chain; [K01602] ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]35.100.8439
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