Guide Gene

Gene ID
Mapoly0042s0085
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0016020] membrane; [GO:0009523] photosystem II; [GO:0009654] oxygen evolving complex; [K08903] photosystem II 13kDa protein; [PF03912] Psb28 protein; [GO:0015979] photosynthesis

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0042s0085 [GO:0016020] membrane; [GO:0009523] photosystem II; [GO:0009654] oxygen evolving complex; [K08903] photosystem II 13kDa protein; [PF03912] Psb28 protein; [GO:0015979] photosynthesis 0.00 1.0000
1 Mapoly0050s0098 [GO:0016020] membrane; [PF02325] YGGT family; [K02221] YggT family protein1.000.9598
2 Mapoly0040s0096 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [K02717] photosystem II oxygen-evolving enhancer protein 2; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis2.000.9559
3 Mapoly0090s0072 [GO:0055114] oxidation-reduction process; [GO:0005886] plasma membrane; [GO:0016655] oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; [PF11910] Cyanobacterial and plant NDH-1 subunit O2.830.9397
4 Mapoly0041s0035 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit4.470.9394
5 Mapoly0061s0050 [PTHR11586:SF1] SUBFAMILY NOT NAMED; [KOG2241] tRNA-binding protein; [PF01588] Putative tRNA binding domain; [GO:0000049] tRNA binding; [PTHR11586] FAMILY NOT NAMED6.860.9047
6 Mapoly0072s0008 -7.350.9251
7 Mapoly0139s0002 [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [KOG0552] FKBP-type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [PTHR10516:SF142] SUBFAMILY NOT NAMED; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase7.480.9181
8 Mapoly0213s0011 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit8.120.9301
9 Mapoly0084s0041 -8.830.9206
10 Mapoly0049s0135 -9.490.9346
11 Mapoly0170s0017 -9.950.9425
12 Mapoly0007s0166 [GO:0005840] ribosome; [KOG1753] 40S ribosomal protein S16; [K02996] small subunit ribosomal protein S9; [GO:0003735] structural constituent of ribosome; [PF00380] Ribosomal protein S9/S16; [PTHR21569] RIBOSOMAL PROTEIN S9; [GO:0006412] translation12.000.9382
13 Mapoly0129s0003 [PTHR25040] FAMILY NOT NAMED; [PF00226] DnaJ domain12.960.9362
14 Mapoly0005s0034 [GO:0005840] ribosome; [KOG4607] Mitochondrial ribosomal protein L9; [GO:0003735] structural constituent of ribosome; [PF03948] Ribosomal protein L9, C-terminal domain; [PF01281] Ribosomal protein L9, N-terminal domain; [PTHR21368] 50S RIBOSOMAL PROTEIN L9; [GO:0005622] intracellular; [K02939] large subunit ribosomal protein L9; [GO:0006412] translation13.560.9352
15 Mapoly0047s0086 -14.070.8904
16 Mapoly0005s0157 -14.140.9342
17 Mapoly0010s0196 [PTHR18901] 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2; [KOG2914] Predicted haloacid-halidohydrolase and related hydrolases; [PF13419] Haloacid dehalogenase-like hydrolase15.490.9285
18 Mapoly0040s0061 [GO:0055114] oxidation-reduction process; [GO:0009396] folic acid-containing compound biosynthetic process; [GO:0004488] methylenetetrahydrofolate dehydrogenase (NADP+) activity; [PTHR10025] TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER; [PF02882] Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; [PF00763] Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; [GO:0003824] catalytic activity; [KOG0089] Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase17.200.8868
19 Mapoly0020s0149 [PTHR32010] FAMILY NOT NAMED; [PF14870] Photosynthesis system II assembly factor YCF4819.600.9213
20 Mapoly0003s0200 [GO:0055114] oxidation-reduction process; [GO:0016655] oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; [PF10716] NADH dehydrogenase transmembrane subunit19.900.9217
21 Mapoly0065s0007 [PTHR12934] 50S RIBOSOMAL PROTEIN L15; [KOG0846] Mitochondrial/chloroplast ribosomal protein L15/L10; [PF00828] Ribosomal protein L18e/L15; [GO:0003735] structural constituent of ribosome; [PTHR12934:SF2] 50S RIBOSOMAL PROTEIN L15; [GO:0015934] large ribosomal subunit; [GO:0006412] translation; [K02876] large subunit ribosomal protein L1520.900.9239
22 Mapoly0027s0042 [GO:0005840] ribosome; [PF01632] Ribosomal protein L35; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation21.020.9284
23 Mapoly0153s0036 -21.750.9067
24 Mapoly0065s0010 -22.140.9147
25 Mapoly0038s0049 [PF02470] mce related protein22.180.8489
26 Mapoly0033s0090 -22.320.8823
27 Mapoly0099s0035 -22.580.9258
28 Mapoly0002s0228 [PF02341] RbcX protein24.490.9161
29 Mapoly0051s0056 [GO:0005840] ribosome; [PF01197] Ribosomal protein L31; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation24.820.9269
30 Mapoly0024s0117 -25.240.8777
31 Mapoly0094s0007 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [K02717] photosystem II oxygen-evolving enhancer protein 2; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis25.920.9220
32 Mapoly0043s0057 [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT; [PF11210] Protein of unknown function (DUF2996)26.150.9131
33 Mapoly0074s0079 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT26.500.8631
34 Mapoly0125s0032 -26.530.9055
35 Mapoly0006s0145 -27.570.9237
36 Mapoly0001s0161 [GO:0005840] ribosome; [PF00416] Ribosomal protein S13/S18; [GO:0003723] RNA binding; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3311] Ribosomal protein S18; [PTHR10871] 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18; [GO:0006412] translation27.960.9252
37 Mapoly0035s0116 -28.200.9016
38 Mapoly0006s0176 [GO:0005840] ribosome; [PTHR11545:SF2] 50S RIBOSOMAL PROTEIN L13; [GO:0003735] structural constituent of ribosome; [KOG3203] Mitochondrial/chloroplast ribosomal protein L13; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L13; [K02871] large subunit ribosomal protein L1329.120.9257
39 Mapoly0006s0110 [PTHR24151] FAMILY NOT NAMED; [PF13857] Ankyrin repeats (many copies)29.150.9210
40 Mapoly0120s0023 [PTHR15852] FAMILY NOT NAMED29.190.8884
41 Mapoly0005s0008 [PTHR14241] INTERFERON-INDUCED PROTEIN 44; [PF07534] TLD29.920.8450
42 Mapoly0004s0031 -30.510.8584
43 Mapoly0137s0001 [GO:0004830] tryptophan-tRNA ligase activity; [6.1.1.2] Tryptophan--tRNA ligase.; [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [K01867] tryptophanyl-tRNA synthetase [EC:6.1.1.2]; [GO:0006436] tryptophanyl-tRNA aminoacylation; [GO:0006418] tRNA aminoacylation for protein translation; [KOG2713] Mitochondrial tryptophanyl-tRNA synthetase; [PTHR10055] TRYPTOPHANYL-TRNA SYNTHETASE; [GO:0004812] aminoacyl-tRNA ligase activity31.130.9024
44 Mapoly0063s0013 [PF10664] Cyanobacterial and plastid NDH-1 subunit M; [GO:0055114] oxidation-reduction process; [GO:0016655] oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor31.940.8945
45 Mapoly0056s0130 [K01104] protein-tyrosine phosphatase [EC:3.1.3.48]; [GO:0006470] protein dephosphorylation; [KOG3217] Protein tyrosine phosphatase; [PTHR11717] LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE; [PTHR11717:SF7] LOW MOLECULAR WEIGHT PROTEIN-TYROSINE-PHOSPHATASE; [GO:0004725] protein tyrosine phosphatase activity; [3.1.3.48] Protein-tyrosine-phosphatase.; [PF01451] Low molecular weight phosphotyrosine protein phosphatase32.170.8649
46 Mapoly0009s0214 [PF05421] Protein of unknown function (DUF751)34.180.8871
47 Mapoly0024s0090 [PF00089] Trypsin; [PTHR22939] SERINE PROTEASE FAMILY S1C HTRA-RELATED; [GO:0005515] protein binding; [PF13180] PDZ domain; [KOG1320] Serine protease; [GO:0004252] serine-type endopeptidase activity; [GO:0006508] proteolysis34.210.9125
48 Mapoly0115s0051 [GO:0042254] ribosome biogenesis; [PTHR11560] FAMILY NOT NAMED; [GO:0005622] intracellular; [PF00466] Ribosomal protein L10; [PTHR11560:SF8] SUBFAMILY NOT NAMED34.250.9214
49 Mapoly0088s0012 -34.640.9026
50 Mapoly0114s0017 -34.900.9069
Showing 1 to 50 of 200 records
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