Guide Gene

Gene ID
Mapoly0028s0111
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF07797] Protein of unknown function (DUF1639)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0028s0111 [PF07797] Protein of unknown function (DUF1639) 0.00 1.0000
1 Mapoly0029s0081 [PF12752] SUZ domain; [GO:0003676] nucleic acid binding; [PF01424] R3H domain; [PTHR15672] CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN4.000.7774
2 Mapoly0009s0016 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006370] 7-methylguanosine mRNA capping; [PF01331] mRNA capping enzyme, catalytic domain; [PTHR10367] MRNA-CAPPING ENZYME; [PF03919] mRNA capping enzyme, C-terminal domain; [2.7.7.50] mRNA guanylyltransferase.; [GO:0006470] protein dephosphorylation; [GO:0004484] mRNA guanylyltransferase activity; [GO:0006397] mRNA processing; [KOG2386] mRNA capping enzyme, guanylyltransferase (alpha) subunit; [K13917] mRNA-capping enzyme [EC:2.7.7.50 3.1.3.33]; [PTHR10367:SF0] MRNA CAPPING ENZYME; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity; [3.1.3.33] Polynucleotide 5'-phosphatase.4.690.8026
3 Mapoly0138s0007 [PTHR10233:SF14] TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT DELTA; [GO:0044237] cellular metabolic process; [KOG1467] Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2); [PTHR10233] TRANSLATION INITIATION FACTOR EIF-2B; [PF01008] Initiation factor 2 subunit family; [K03680] translation initiation factor eIF-2B delta subunit6.320.8204
4 Mapoly0082s0025 [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [KOG4214] Myotrophin and similar proteins; [PF00415] Regulator of chromosome condensation (RCC1) repeat; [PF12796] Ankyrin repeats (3 copies)14.490.7284
5 Mapoly0165s0019 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [KOG0337] ATP-dependent RNA helicase; [PF08147] DBP10CT (NUC160) domain; [GO:0005634] nucleus; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF71] SUBFAMILY NOT NAMED; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides23.810.7888
6 Mapoly0012s0182 -24.190.6806
7 Mapoly0129s0030 [GO:0005524] ATP binding; [K07760] cyclin-dependent kinase [EC:2.7.11.22]; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24056:SF92] CELL DIVISION PROTEIN KINASE 8; [GO:0006468] protein phosphorylation; [KOG0666] Cyclin C-dependent kinase CDK8; [2.7.11.22] Cyclin-dependent kinase.; [PTHR24056] CELL DIVISION PROTEIN KINASE25.690.6888
8 Mapoly0088s0090 [PF12701] Scd6-like Sm domain; [PTHR13586:SF0] SUBFAMILY NOT NAMED; [KOG1073] Uncharacterized mRNA-associated protein RAP55; [PTHR13586] SCD6 PROTEIN-RELATED; [PF09532] FDF domain27.570.7467
9 Mapoly0048s0072 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [KOG0920] ATP-dependent RNA helicase A; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [GO:0003676] nucleic acid binding; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold27.930.7837
10 Mapoly0007s0176 [GO:0005847] mRNA cleavage and polyadenylation specificity factor complex; [K14402] cleavage and polyadenylation specificity factor subunit 2; [GO:0006378] mRNA polyadenylation; [KOG1135] mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit); [PF07521] RNA-metabolising metallo-beta-lactamase; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [PF13299] Cleavage and polyadenylation factor 2 C-terminal; [PTHR11203:SF5] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, 100 KDA SUBUNIT; [PF10996] Beta-Casp domain; [GO:0006379] mRNA cleavage29.440.7668
11 Mapoly0036s0084 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG0387] Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain); [PF00271] Helicase conserved C-terminal domain; [PTHR10799:SF49] DNA EXCISION REPAIR PROTEIN ERCC-6 (COCKAYNE SYNDROME PROTEIN CSB); [K10841] DNA excision repair protein ERCC-630.050.7408
12 Mapoly0061s0123 [GO:0005515] protein binding; [PTHR19846] WD40 REPEAT PROTEIN; [KOG0272] U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats); [K12662] U4/U6 small nuclear ribonucleoprotein PRP4; [PF00400] WD domain, G-beta repeat; [PF08799] pre-mRNA processing factor 4 (PRP4) like30.790.7847
13 Mapoly0070s0087 -30.810.7707
14 Mapoly0036s0031 [GO:0003723] RNA binding; [K02945] small subunit ribosomal protein S1; [PF00575] S1 RNA binding domain; [PTHR15838] FAMILY NOT NAMED34.290.7626
15 Mapoly0049s0034 -35.370.7766
16 Mapoly0144s0004 [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [KOG0745] Putative ATP-dependent Clp-type protease (AAA+ ATPase superfamily); [PF07724] AAA domain (Cdc48 subfamily); [GO:0009376] HslUV protease complex; [PTHR11262:SF3] ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU; [PTHR11262] HSL AND CLP PROTEASE; [GO:0016887] ATPase activity; [PF10431] C-terminal, D2-small domain, of ClpB protein; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0070011] peptidase activity, acting on L-amino acid peptides35.690.7391
17 Mapoly0028s0046 [GO:0005643] nuclear pore; [KOG0845] Nuclear pore complex, Nup98 component (sc Nup145/Nup100/Nup116); [GO:0006810] transport; [PF12110] Nuclear protein 96; [PF04096] Nucleoporin autopeptidase; [PTHR23198] NUCLEOPORIN37.130.7786
18 Mapoly0062s0029 [KOG1982] Nuclear 5'-3' exoribonuclease-interacting protein, Rai1p; [PF08652] RAI1 like PD-(D/E)XK nuclease; [PTHR12395:SF9] SUBFAMILY NOT NAMED; [PTHR12395] DOM-3 RELATED37.950.7755
19 Mapoly0072s0074 [GO:0003723] RNA binding; [PF02854] MIF4G domain; [GO:0005515] protein binding; [KOG2140] Uncharacterized conserved protein; [PTHR18034] CELL CYCLE CONTROL PROTEIN CWF22-RELATED; [PTHR18034:SF3] CELL CYCLE CONTROL PROTEIN CWF22; [K13100] pre-mRNA-splicing factor CWC22; [PF02847] MA3 domain39.340.7796
20 Mapoly0172s0015 [PTHR13471] TETRATRICOPEPTIDE-LIKE HELICAL; [PF08424] NRDE-2, necessary for RNA interference49.600.7629
21 Mapoly0027s0100 [PTHR21678] GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 8850.300.7585
22 Mapoly0026s0029 [PF13857] Ankyrin repeats (many copies); [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN50.560.7476
23 Mapoly0005s0239 [PF04112] Mak10 subunit, NatC N(alpha)-terminal acetyltransferase; [PTHR21373] GLUCOSE REPRESSIBLE PROTEIN MAK10; [KOG2343] Glucose-repressible protein and related proteins51.960.7581
24 Mapoly0020s0016 [PTHR13102:SF0] SUBFAMILY NOT NAMED; [PTHR13102] PROTEIN C14ORF21; [KOG2188] Predicted RNA-binding protein, contains Pumilio domains52.960.7690
25 Mapoly0057s0088 [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [KOG1294] Apurinic/apyrimidinic endonuclease and related enzymes; [GO:0006281] DNA repair; [K10771] AP endonuclease 1 [EC:4.2.99.18]; [PF03372] Endonuclease/Exonuclease/phosphatase family; [GO:0004518] nuclease activity; [PTHR22748] AP ENDONUCLEASE53.670.7280
26 Mapoly0122s0038 [GO:0004176] ATP-dependent peptidase activity; [PTHR23327] RING FINGER PROTEIN 127; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis; [PTHR23327:SF0] SUBFAMILY NOT NAMED53.890.7750
27 Mapoly0084s0050 [PTHR10751] GUANYLATE BINDING PROTEIN; [PF02263] Guanylate-binding protein, N-terminal domain; [GO:0003924] GTPase activity; [GO:0005525] GTP binding55.120.7697
28 Mapoly0207s0010 -57.170.7266
29 Mapoly0075s0059 [GO:0005524] ATP binding; [KOG0296] Angio-associated migratory cell protein (contains WD40 repeats); [PF00069] Protein kinase domain; [PTHR13743] BEIGE/BEACH-RELATED; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PF02138] Beige/BEACH domain; [PF00400] WD domain, G-beta repeat60.150.7664
30 Mapoly0169s0023 [PTHR16274] NUCLEOLAR PROTEIN 8; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)60.530.7675
31 Mapoly0062s0011 [KOG2654] Uncharacterized conserved protein; [K13106] pre-mRNA-splicing factor CWC26; [PTHR31809] FAMILY NOT NAMED; [PF09736] Pre-mRNA-splicing factor of RES complex60.890.7734
32 Mapoly0054s0116 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PTHR13710] DNA HELICASE RECQ FAMILY MEMBER; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [GO:0003676] nucleic acid binding65.730.7348
33 Mapoly0027s0115 [PF12656] DExH-box splicing factor binding site; [PTHR15818] G PATCH AND KOW-CONTAINING; [PTHR15818:SF2] SUBFAMILY NOT NAMED; [K13101] G patch domain and KOW motifs-containing protein66.090.7396
34 Mapoly0122s0055 [GO:0031625] ubiquitin protein ligase binding; [PTHR11932:SF5] ANAPHASE-PROMOTING COMPLEX SUBUNIT 2; [GO:0031461] cullin-RING ubiquitin ligase complex; [GO:0006511] ubiquitin-dependent protein catabolic process; [K03349] anaphase-promoting complex subunit 2; [KOG2165] Anaphase-promoting complex (APC), subunit 2; [PTHR11932] CULLIN; [PF00888] Cullin family; [PF08672] Anaphase promoting complex (APC) subunit 266.250.7653
35 Mapoly0173s0010 [GO:0005524] ATP binding; [PF09262] Peroxisome biogenesis factor 1, N-terminal; [GO:0005777] peroxisome; [PTHR23077:SF12] PEROXISOME BIOGENESIS FACTOR 1 (PEROXIN-1); [GO:0006625] protein targeting to peroxisome; [GO:0005778] peroxisomal membrane; [GO:0007031] peroxisome organization; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23077] AAA-FAMILY ATPASE; [GO:0042623] ATPase activity, coupled; [KOG0735] AAA+-type ATPase; [K13338] peroxin-166.250.6773
36 Mapoly0090s0009 [PTHR13130] 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED; [PF11571] Mediator complex subunit 2766.810.7537
37 Mapoly0036s0119 [PF14500] Dos2-interacting transcription regulator of RNA-Pol-II; [PF12460] RNAPII transcription regulator C-terminal; [PTHR12891] DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS1971.750.7569
38 Mapoly0010s0074 -71.760.7121
39 Mapoly0056s0087 [PF02897] Prolyl oligopeptidase, N-terminal beta-propeller domain; [GO:0008236] serine-type peptidase activity; [GO:0070008] serine-type exopeptidase activity; [GO:0004252] serine-type endopeptidase activity; [GO:0006508] proteolysis; [PTHR11757] PROTEASE FAMILY S9A OLIGOPEPTIDASE; [PF00326] Prolyl oligopeptidase family; [KOG2237] Predicted serine protease72.460.7320
40 Mapoly0007s0068 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0019901] protein kinase binding; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [PF02984] Cyclin, C-terminal domain; [GO:0005634] nucleus; [KOG0834] CDK9 kinase-activating protein cyclin T; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity72.990.7581
41 Mapoly0033s0026 [K11799] WD repeat-containing protein 21A; [GO:0005515] protein binding; [PTHR19845] KATANIN P80 SUBUNIT; [PF00400] WD domain, G-beta repeat73.250.7468
42 Mapoly0087s0013 [K13102] DNA/RNA-binding protein KIN17; [KOG2837] Protein containing a U1-type Zn-finger and implicated in RNA splicing or processing; [PTHR12805] KIN17 (KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG); [PF10357] Domain of Kin17 curved DNA-binding protein73.760.7224
43 Mapoly0001s0524 [K13146] integrator complex subunit 9; [PTHR11203:SF2] INTEGRATOR COMPLEX SUBUNIT 9; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [GO:0016180] snRNA processing; [PF10996] Beta-Casp domain; [KOG1138] Predicted cleavage and polyadenylation specificity factor (CPSF subunit); [GO:0032039] integrator complex75.010.7555
44 Mapoly0026s0140 -77.230.7280
45 Mapoly0003s0144 [GO:0006355] regulation of transcription, DNA-dependent; [PF02671] Paired amphipathic helix repeat; [PTHR12346] SIN3B-RELATED; [PF08295] Sin3 family co-repressor; [GO:0005634] nucleus77.360.7285
46 Mapoly0043s0063 [PF00488] MutS domain V; [GO:0005524] ATP binding; [PTHR11361] DNA MISMATCH REPAIR MUTS RELATED PROTEINS; [K08736] DNA mismatch repair protein MSH3; [PF05188] MutS domain II; [PTHR11361:SF34] DNA MISMATCH REPAIR PROTEIN MUTS; [GO:0006298] mismatch repair; [GO:0030983] mismatched DNA binding; [KOG0218] Mismatch repair MSH3; [PF01624] MutS domain I; [PF05192] MutS domain III80.820.7401
47 Mapoly0027s0127 [PTHR22841:SF4] GB DEF: MKIAA1988 PROTEIN (FRAGMENT); [GO:0005515] protein binding; [PTHR22841] FAMILY NOT NAMED; [K14548] U3 small nucleolar RNA-associated protein 4; [KOG0316] Conserved WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat81.170.7566
48 Mapoly0022s0109 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PTHR11618] TRANSCRIPTION INITIATION FACTOR IIB-RELATED; [GO:0008270] zinc ion binding; [KOG1597] Transcription initiation factor TFIIB82.160.7406
49 Mapoly0064s0032 [GO:0005515] protein binding; [KOG1063] RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily; [PTHR13729] ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN); [K11374] elongator complex protein 2; [PTHR13729:SF2] ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN); [PF00400] WD domain, G-beta repeat85.590.7614
50 Mapoly0037s0064 [PTHR23231] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PTHR23231:SF4] SUBFAMILY NOT NAMED86.630.7330
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