Guide Gene

Gene ID
Mapoly0001s0524
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K13146] integrator complex subunit 9; [PTHR11203:SF2] INTEGRATOR COMPLEX SUBUNIT 9; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [GO:0016180] snRNA processing; [PF10996] Beta-Casp domain; [KOG1138] Predicted cleavage and polyadenylation specificity factor (CPSF subunit); [GO:0032039] integrator complex

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0001s0524 [K13146] integrator complex subunit 9; [PTHR11203:SF2] INTEGRATOR COMPLEX SUBUNIT 9; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [GO:0016180] snRNA processing; [PF10996] Beta-Casp domain; [KOG1138] Predicted cleavage and polyadenylation specificity factor (CPSF subunit); [GO:0032039] integrator complex 0.00 1.0000
1 Mapoly0062s0011 [KOG2654] Uncharacterized conserved protein; [K13106] pre-mRNA-splicing factor CWC26; [PTHR31809] FAMILY NOT NAMED; [PF09736] Pre-mRNA-splicing factor of RES complex5.830.8721
2 Mapoly0001s0567 [K01410] mitochondrial intermediate peptidase [EC:3.4.24.59]; [PTHR11804] PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED; [PTHR11804:SF5] MITOCHONDRIAL INTERMEDIATE PEPTIDASE; [GO:0004222] metalloendopeptidase activity; [3.4.24.59] Mitochondrial intermediate peptidase.; [PF01432] Peptidase family M3; [GO:0006508] proteolysis; [KOG2090] Metalloendopeptidase family - mitochondrial intermediate peptidase6.480.8583
3 Mapoly0061s0123 [GO:0005515] protein binding; [PTHR19846] WD40 REPEAT PROTEIN; [KOG0272] U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats); [K12662] U4/U6 small nuclear ribonucleoprotein PRP4; [PF00400] WD domain, G-beta repeat; [PF08799] pre-mRNA processing factor 4 (PRP4) like8.250.8710
4 Mapoly0067s0042 [PTHR21494] ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 (ASC-1 COMPLEX SUBUNIT P100); [PF02845] CUE domain; [GO:0005515] protein binding; [PTHR21494:SF0] SUBFAMILY NOT NAMED; [KOG4501] Transcription coactivator complex, P100 component13.230.8630
5 Mapoly0056s0054 [GO:0006506] GPI anchor biosynthetic process; [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [K03857] phosphatidylinositol glycan, class A [EC:2.4.1.198]; [PTHR12526] GLYCOSYLTRANSFERASE; [KOG1111] N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase; [2.4.1.198] Phosphatidylinositol N-acetylglucosaminyltransferase.; [PF08288] PIGA (GPI anchor biosynthesis)14.070.8445
6 Mapoly0117s0021 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family14.280.8644
7 Mapoly0090s0009 [PTHR13130] 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED; [PF11571] Mediator complex subunit 2714.830.8355
8 Mapoly0125s0040 [GO:0008168] methyltransferase activity; [PF08241] Methyltransferase domain; [KOG2940] Predicted methyltransferase; [GO:0008152] metabolic process; [PTHR13090] UNCHARACTERIZED15.750.8044
9 Mapoly0008s0195 [PTHR13304] GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN; [PF04114] Gaa1-like, GPI transamidase component; [GO:0016021] integral to membrane; [PTHR13304:SF0] SUBFAMILY NOT NAMED; [GO:0042765] GPI-anchor transamidase complex; [K05289] glycosylphosphatidylinositol transamidase; [KOG3566] Glycosylphosphatidylinositol anchor attachment protein GAA116.120.8426
10 Mapoly0113s0062 [GO:0008762] UDP-N-acetylmuramate dehydrogenase activity; [KOG1232] Proteins containing the FAD binding domain; [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [PF02913] FAD linked oxidases, C-terminal domain; [GO:0016491] oxidoreductase activity; [GO:0003824] catalytic activity; [PTHR11748] D-LACTATE DEHYDROGENASE; [PF01565] FAD binding domain16.120.8512
11 Mapoly0062s0112 [PTHR13255:SF0] SUBFAMILY NOT NAMED; [PTHR13255] ATAXIN-10; [PF09759] Spinocerebellar ataxia type 10 protein domain16.250.8114
12 Mapoly0039s0104 [GO:0006396] RNA processing; [3.1.26.5] Ribonuclease P.; [GO:0004526] ribonuclease P activity; [PF06978] Ribonucleases P/MRP protein subunit POP1; [K01164] ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]; [GO:0001682] tRNA 5'-leader removal; [PTHR22731] RIBONUCLEASE P/MRP SUBUNIT; [PF08170] POPLD (NUC188) domain16.490.8630
13 Mapoly0024s0139 [PTHR13391] TUBULIN-RELATED PROTEIN; [PF14881] Tubulin domain; [PF10644] Misato Segment II tubulin-like domain; [KOG2530] Members of tubulin/FtsZ family16.730.8562
14 Mapoly0061s0093 -16.940.8154
15 Mapoly0005s0239 [PF04112] Mak10 subunit, NatC N(alpha)-terminal acetyltransferase; [PTHR21373] GLUCOSE REPRESSIBLE PROTEIN MAK10; [KOG2343] Glucose-repressible protein and related proteins18.000.8287
16 Mapoly0064s0032 [GO:0005515] protein binding; [KOG1063] RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily; [PTHR13729] ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN); [K11374] elongator complex protein 2; [PTHR13729:SF2] ELONGATOR COMPLEX PROTEIN 2 (STAT3-INTERACTING PROTEIN); [PF00400] WD domain, G-beta repeat18.000.8583
17 Mapoly0122s0055 [GO:0031625] ubiquitin protein ligase binding; [PTHR11932:SF5] ANAPHASE-PROMOTING COMPLEX SUBUNIT 2; [GO:0031461] cullin-RING ubiquitin ligase complex; [GO:0006511] ubiquitin-dependent protein catabolic process; [K03349] anaphase-promoting complex subunit 2; [KOG2165] Anaphase-promoting complex (APC), subunit 2; [PTHR11932] CULLIN; [PF00888] Cullin family; [PF08672] Anaphase promoting complex (APC) subunit 218.970.8519
18 Mapoly0084s0050 [PTHR10751] GUANYLATE BINDING PROTEIN; [PF02263] Guanylate-binding protein, N-terminal domain; [GO:0003924] GTPase activity; [GO:0005525] GTP binding19.620.8520
19 Mapoly0015s0194 [PTHR12747] IKAPPAB KINASE COMPLEX-ASSOCIATED PROTEIN; [KOG1920] IkappaB kinase complex, IKAP component; [K11373] elongator complex protein 1; [PF04762] IKI3 family20.000.8564
20 Mapoly0122s0038 [GO:0004176] ATP-dependent peptidase activity; [PTHR23327] RING FINGER PROTEIN 127; [PF02190] ATP-dependent protease La (LON) domain; [GO:0006508] proteolysis; [PTHR23327:SF0] SUBFAMILY NOT NAMED23.240.8563
21 Mapoly0027s0075 [3.4.11.9] Xaa-Pro aminopeptidase.; [KOG2414] Putative Xaa-Pro aminopeptidase; [PF05195] Aminopeptidase P, N-terminal domain; [GO:0004177] aminopeptidase activity; [K01262] Xaa-Pro aminopeptidase [EC:3.4.11.9]; [GO:0030145] manganese ion binding; [PF00557] Metallopeptidase family M24; [PTHR10804:SF17] XAA-PRO DIPEPTIDASE; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P)23.320.8252
22 Mapoly0070s0087 -26.080.8165
23 Mapoly0211s0012 -26.400.8448
24 Mapoly0009s0169 [GO:0006355] regulation of transcription, DNA-dependent; [PF04494] WD40 associated region in TFIID subunit; [GO:0005515] protein binding; [K03130] transcription initiation factor TFIID subunit 5; [GO:0005634] nucleus; [PTHR19879] TRANSCRIPTION INITIATION FACTOR TFIID; [KOG0263] Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA); [PTHR19879:SF1] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat26.550.8476
25 Mapoly0133s0016 [GO:0008408] 3'-5' exonuclease activity; [PF01927] Mut7-C RNAse domain; [PF01612] 3'-5' exonuclease; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [PTHR12124] POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED; [K09122] hypothetical protein28.270.8106
26 Mapoly0001s0040 [PTHR12466:SF8] SUBFAMILY NOT NAMED; [PF05179] RNA pol II accessory factor, Cdc73 family; [KOG3786] RNA polymerase II assessory factor Cdc73p; [PTHR12466] CDC73 DOMAIN PROTEIN31.130.8426
27 Mapoly0031s0053 [PF12796] Ankyrin repeats (3 copies); [PTHR24142] FAMILY NOT NAMED31.450.8348
28 Mapoly0007s0129 [GO:0005515] protein binding; [PF00646] F-box domain31.750.8459
29 Mapoly0062s0029 [KOG1982] Nuclear 5'-3' exoribonuclease-interacting protein, Rai1p; [PF08652] RAI1 like PD-(D/E)XK nuclease; [PTHR12395:SF9] SUBFAMILY NOT NAMED; [PTHR12395] DOM-3 RELATED32.190.8285
30 Mapoly0177s0018 [PF13374] Tetratricopeptide repeat; [PF13424] Tetratricopeptide repeat; [PTHR19959] KINESIN LIGHT CHAIN33.050.8142
31 Mapoly0072s0074 [GO:0003723] RNA binding; [PF02854] MIF4G domain; [GO:0005515] protein binding; [KOG2140] Uncharacterized conserved protein; [PTHR18034] CELL CYCLE CONTROL PROTEIN CWF22-RELATED; [PTHR18034:SF3] CELL CYCLE CONTROL PROTEIN CWF22; [K13100] pre-mRNA-splicing factor CWC22; [PF02847] MA3 domain33.470.8507
32 Mapoly0107s0026 [GO:0003723] RNA binding; [GO:0005737] cytoplasm; [K12839] survival of motor neuron-related-splicing factor 30; [GO:0006397] mRNA processing; [KOG3026] Splicing factor SPF30; [GO:0005634] nucleus; [PF06003] Survival motor neuron protein (SMN); [PTHR12664] SURVIVAL MOTOR NEURON PROTEIN34.640.8276
33 Mapoly0004s0082 [GO:0005515] protein binding; [PF00439] Bromodomain; [K11723] bromodomain-containing protein 7/9; [PTHR22881] BROMODOMAIN CONTAINING PROTEIN35.360.8295
34 Mapoly0031s0038 [PTHR12444:SF3] gb def: c32d5.3.p [caenorhabditis elegans]; [KOG1877] Putative transmembrane protein cmp44E; [PTHR12444] UNCHARACTERIZED35.410.8249
35 Mapoly0813s0001 [KOG2019] Metalloendoprotease HMP1 (insulinase superfamily); [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF08367] Peptidase M16C associated; [GO:0006508] proteolysis35.500.8040
36 Mapoly0009s0155 [K11886] proteasome component ECM29; [PTHR23346:SF19] SUBFAMILY NOT NAMED; [PF13001] Proteasome stabiliser; [PTHR23346] TRANSLATIONAL ACTIVATOR GCN1-RELATED; [KOG0915] Uncharacterized conserved protein36.660.8321
37 Mapoly0033s0026 [K11799] WD repeat-containing protein 21A; [GO:0005515] protein binding; [PTHR19845] KATANIN P80 SUBUNIT; [PF00400] WD domain, G-beta repeat39.570.8084
38 Mapoly0075s0059 [GO:0005524] ATP binding; [KOG0296] Angio-associated migratory cell protein (contains WD40 repeats); [PF00069] Protein kinase domain; [PTHR13743] BEIGE/BEACH-RELATED; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PF02138] Beige/BEACH domain; [PF00400] WD domain, G-beta repeat40.150.8293
39 Mapoly0149s0031 [GO:0005524] ATP binding; [PTHR24031:SF68] SUBFAMILY NOT NAMED; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0350] DEAD-box ATP-dependent RNA helicase40.400.8238
40 Mapoly0026s0116 [PTHR16193] UNCHARACTERIZED; [PF13414] TPR repeat; [KOG1128] Uncharacterized conserved protein, contains TPR repeats40.730.8378
41 Mapoly0183s0006 [GO:0005524] ATP binding; [K09680] type II pantothenate kinase [EC:2.7.1.33]; [2.7.1.33] Pantothenate kinase.; [GO:0004594] pantothenate kinase activity; [PF01937] Protein of unknown function DUF89; [PTHR12280] PANTOTHENATE KINASE; [GO:0015937] coenzyme A biosynthetic process; [PF03630] Fumble; [KOG2201] Pantothenate kinase PanK and related proteins41.410.8238
42 Mapoly0138s0007 [PTHR10233:SF14] TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT DELTA; [GO:0044237] cellular metabolic process; [KOG1467] Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2); [PTHR10233] TRANSLATION INITIATION FACTOR EIF-2B; [PF01008] Initiation factor 2 subunit family; [K03680] translation initiation factor eIF-2B delta subunit41.890.8170
43 Mapoly0011s0185 [KOG0919] C-5 cytosine-specific DNA methylase; [GO:0008168] methyltransferase activity; [PTHR10629] CYTOSINE-SPECIFIC METHYLTRANSFERASE; [K00558] DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]; [PF00145] C-5 cytosine-specific DNA methylase; [2.1.1.37] DNA (cytosine-5-)-methyltransferase.42.040.8275
44 Mapoly0151s0045 [GO:0016020] membrane; [GO:0004222] metalloendopeptidase activity; [GO:0008233] peptidase activity; [K06013] STE24 endopeptidase [EC:3.4.24.84]; [GO:0071586] CAAX-box protein processing; [PF01435] Peptidase family M48; [3.4.24.84] Ste24 endopeptidase.; [PTHR10120] CAAX PRENYL PROTEASE 1; [KOG2719] Metalloprotease; [GO:0006508] proteolysis43.370.8069
45 Mapoly0173s0027 -44.000.7967
46 Mapoly0141s0031 -44.670.7921
47 Mapoly0202s0013 [PF12937] F-box-like; [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG4341] F-box protein containing LRR45.060.8279
48 Mapoly0007s0001 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR31282] FAMILY NOT NAMED; [PF03106] WRKY DNA -binding domain; [PF10533] Plant zinc cluster domain46.320.8190
49 Mapoly0025s0135 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PTHR10436:SF53] SUBFAMILY NOT NAMED46.370.8132
50 Mapoly0076s0093 [PTHR15668] JM1 PROTEIN; [PF05667] Protein of unknown function (DUF812)46.800.8017
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