Guide Gene

Gene ID
Mapoly0087s0013
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K13102] DNA/RNA-binding protein KIN17; [KOG2837] Protein containing a U1-type Zn-finger and implicated in RNA splicing or processing; [PTHR12805] KIN17 (KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG); [PF10357] Domain of Kin17 curved DNA-binding protein

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0087s0013 [K13102] DNA/RNA-binding protein KIN17; [KOG2837] Protein containing a U1-type Zn-finger and implicated in RNA splicing or processing; [PTHR12805] KIN17 (KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG); [PF10357] Domain of Kin17 curved DNA-binding protein 0.00 1.0000
1 Mapoly0049s0076 [PF01936] NYN domain1.000.8420
2 Mapoly0140s0012 [KOG2808] U5 snRNP-associated RNA splicing factor; [GO:0005681] spliceosomal complex; [PF02840] Prp18 domain; [K12817] pre-mRNA-splicing factor 18; [GO:0008380] RNA splicing; [PTHR13007] PRE-MRNA SPLICING FACTOR-RELATED; [PF08799] pre-mRNA processing factor 4 (PRP4) like5.290.7600
3 Mapoly0012s0210 [PTHR13486:SF2] SUBFAMILY NOT NAMED; [KOG3345] Uncharacterized conserved protein; [PF07052] Hepatocellular carcinoma-associated antigen 59; [PTHR13486] FAMILY NOT NAMED7.210.7890
4 Mapoly0055s0007 [PTHR31934] FAMILY NOT NAMED; [PF08574] Protein of unknown function (DUF1762)9.170.7922
5 Mapoly0071s0060 -9.950.7643
6 Mapoly0026s0140 -12.120.7781
7 Mapoly0056s0071 [PTHR13507] UNCHARACTERIZED; [PF06658] Protein of unknown function (DUF1168)12.250.7841
8 Mapoly0023s0048 [K12840] splicing factor 45; [PTHR13288:SF8] DNA-DAMAGE REPAIR PROTEIN DRT111; [PTHR13288] DNA-DAMAGE REPAIR PROTEIN DRT111; [PF01585] G-patch domain; [GO:0003676] nucleic acid binding; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [KOG1996] mRNA splicing factor12.730.7692
9 Mapoly0037s0029 -13.420.7580
10 Mapoly0026s0056 [PTHR30007] PHP DOMAIN PROTEIN; [K07053] TatD-related deoxyribonuclease; [GO:0003824] catalytic activity; [PF02811] PHP domain13.860.7830
11 Mapoly0046s0027 [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT14.700.7390
12 Mapoly0019s0056 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family15.560.7932
13 Mapoly0027s0149 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031:SF2] SUBFAMILY NOT NAMED; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF13959] Domain of unknown function (DUF4217); [KOG0345] ATP-dependent RNA helicase18.650.7640
14 Mapoly0061s0133 [PTHR15885] UNCHARACTERIZED24.170.7762
15 Mapoly0065s0046 [PTHR15327:SF0] SUBFAMILY NOT NAMED; [PTHR15327] MICROFIBRIL-ASSOCIATED PROTEIN; [KOG1425] Microfibrillar-associated protein MFAP1; [PF06991] Splicing factor, Prp19-binding domain; [K13110] microfibrillar-associated protein 127.500.7466
16 Mapoly0043s0023 [PF04641] Rtf2 RING-finger; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR12775] PROTEIN C20ORF43 HOMOLOG; [KOG3113] Uncharacterized conserved protein30.050.7339
17 Mapoly0013s0135 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [PF13837] Myb/SANT-like DNA-binding domain33.820.7050
18 Mapoly0036s0077 [PTHR10933:SF9] IMMUNOGLOBULIN-BINDING PROTEIN 1; [PF04177] TAP42-like family; [PTHR10933] IMMUNOGLOBULIN-BINDING PROTEIN 1; [GO:0009966] regulation of signal transduction; [KOG2830] Protein phosphatase 2A-associated protein34.740.7157
19 Mapoly0027s0100 [PTHR21678] GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 8836.950.7603
20 Mapoly0079s0035 [PTHR21531] LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED; [KOG2637] Uncharacterized conserved protein39.890.7389
21 Mapoly0046s0071 [PF02002] TFIIE alpha subunit; [KOG2593] Transcription initiation factor IIE, alpha subunit; [K03136] transcription initiation factor TFIIE subunit alpha; [PTHR13097] TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT42.990.7244
22 Mapoly0060s0114 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE44.730.7464
23 Mapoly0001s0039 [PF03914] CBF/Mak21 family; [PTHR12048] CCAAT-BINDING FACTOR-RELATED; [KOG2038] CAATT-binding transcription factor/60S ribosomal subunit biogenesis protein45.500.7646
24 Mapoly0075s0086 -46.280.7231
25 Mapoly0020s0093 [PF12589] Methyltransferase involved in Williams-Beuren syndrome; [PTHR12734:SF0] SUBFAMILY NOT NAMED; [GO:0008168] methyltransferase activity; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process; [KOG1541] Predicted protein carboxyl methylase; [PTHR12734] METHYLTRANSFERASE-RELATED47.180.7525
26 Mapoly0036s0026 [PF15375] Domain of unknown function (DUF4602)51.220.7550
27 Mapoly0026s0067 [PF10187] N-terminal domain of NEFA-interacting nuclear protein NIP30; [PTHR13495:SF0] SUBFAMILY NOT NAMED; [KOG4036] Uncharacterized conserved protein; [PTHR13495] NEFA-INTERACTING NUCLEAR PROTEIN NIP3051.650.7330
28 Mapoly0005s0265 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [KOG0883] Cyclophilin type, U box-containing peptidyl-prolyl cis-trans isomerase; [PTHR11071:SF147] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF04641] Rtf2 RING-finger; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [5.2.1.8] Peptidylprolyl isomerase.; [K10598] peptidyl-prolyl cis-trans isomerase-like 2 [EC:5.2.1.8]55.990.7244
29 Mapoly0015s0022 [GO:0005634] nucleus; [PTHR12722] XAP-5 PROTEIN-RELATED; [PF04921] XAP5, circadian clock regulator; [K13119] protein FAM50; [KOG2894] Uncharacterized conserved protein XAP-557.880.7304
30 Mapoly0028s0047 [PF10283] Zinc-finger (CX5CX6HX5H) motif58.240.7264
31 Mapoly0031s0174 [GO:0008168] methyltransferase activity; [GO:0005507] copper ion binding; [PTHR21320] CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED; [GO:0006412] translation; [PF09243] Mitochondrial small ribosomal subunit Rsm2258.330.7541
32 Mapoly0089s0068 [PTHR21683] UNCHARACTERIZED; [PF13863] Domain of unknown function (DUF4200); [PTHR21683:SF2] SUBFAMILY NOT NAMED60.790.7412
33 Mapoly0091s0021 [PTHR13135] CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26; [PF10258] PHAX RNA-binding domain; [KOG3948] Mediator of U snRNA nuclear export PHAX60.980.7521
34 Mapoly0049s0034 -64.210.7536
35 Mapoly0007s0212 [PF00929] Exonuclease; [PTHR12801] EXONUCLEASE; [KOG2249] 3'-5' exonuclease64.270.7469
36 Mapoly0116s0020 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K01529] dynamin GTPase [EC:3.6.5.5]; [PTHR24031:SF78] SUBFAMILY NOT NAMED; [3.6.1.-] In phosphorous-containing anhydrides.; [KOG0330] ATP-dependent RNA helicase65.060.7547
37 Mapoly0085s0044 [PTHR13182] ZINC FINGER PROTEIN 622; [PF12171] Zinc-finger double-stranded RNA-binding; [PF12756] C2H2 type zinc-finger (2 copies); [KOG2785] C2H2-type Zn-finger protein65.710.6891
38 Mapoly0065s0011 [PF01963] TraB family; [PTHR21530] PHEROMONE SHUTDOWN PROTEIN67.880.7495
39 Mapoly0133s0002 [KOG2441] mRNA splicing factor/probable chromatin binding snw family nuclear protein; [GO:0005681] spliceosomal complex; [GO:0000398] mRNA splicing, via spliceosome; [K06063] SNW domain-containing protein 1; [PTHR12096] NUCLEAR PROTEIN SKIP-RELATED; [PF02731] SKIP/SNW domain68.990.7403
40 Mapoly0066s0098 [GO:0006284] base-excision repair; [KOG2875] 8-oxoguanine DNA glycosylase; [GO:0006289] nucleotide-excision repair; [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [PTHR10242] N-GLYCOSYLASE/DNA LYASE; [PF07934] 8-oxoguanine DNA glycosylase, N-terminal domain; [PF00730] HhH-GPD superfamily base excision DNA repair protein; [K03660] N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]; [GO:0003684] damaged DNA binding; [GO:0008534] oxidized purine nucleobase lesion DNA N-glycosylase activity; [3.2.2.-] Hydrolyzing N-glycosyl compounds.69.820.7358
41 Mapoly0028s0050 [PTHR13421] FAMILY NOT NAMED; [PF12251] snRNA-activating protein of 50kDa MW C terminal; [KOG2664] Small nuclear RNA activating protein complex - 50kD subunit (SNAP50)69.970.7179
42 Mapoly0020s0016 [PTHR13102:SF0] SUBFAMILY NOT NAMED; [PTHR13102] PROTEIN C14ORF21; [KOG2188] Predicted RNA-binding protein, contains Pumilio domains70.000.7533
43 Mapoly0022s0124 -71.410.7069
44 Mapoly0013s0140 [K13107] RNA-binding motif protein, X-linked 2; [KOG0126] Predicted RNA-binding protein (RRM superfamily); [PTHR23139] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)73.300.6630
45 Mapoly0028s0111 [PF07797] Protein of unknown function (DUF1639)73.760.7224
46 Mapoly0007s0211 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0031011] Ino80 complex; [KOG0681] Actin-related protein - Arp5p; [PF00022] Actin; [GO:0006281] DNA repair; [PTHR11937:SF16] ACTIN-RELATED PROTEIN 5, ARP5; [K11672] actin-related protein 5; [PTHR11937] ACTIN74.070.7423
47 Mapoly0001s0280 [GO:0005524] ATP binding; [KOG0340] ATP-dependent RNA helicase; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding76.290.7423
48 Mapoly0131s0026 [GO:0003677] DNA binding; [K13211] GC-rich sequence DNA-binding factor; [GO:0006355] regulation of transcription, DNA-dependent; [PF07842] GC-rich sequence DNA-binding factor-like protein; [PTHR12214] GC-RICH SEQUENCE DNA-BINDING FACTOR; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [PTHR12214:SF0] SUBFAMILY NOT NAMED77.920.7338
49 Mapoly0029s0122 [PTHR15565:SF0] PROTEIN AATF (APOPTOSIS-ANTAGONIZING TRANSCRIPTION FACTOR); [PF13339] Apoptosis antagonizing transcription factor; [GO:0005634] nucleus; [KOG2773] Apoptosis antagonizing transcription factor/protein transport protein; [PTHR15565] AATF PROTEIN (APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR); [PF08164] Apoptosis-antagonizing transcription factor, C-terminal79.390.7495
50 Mapoly0078s0065 -82.270.5991
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