Guide Gene
- Gene ID
- Mapoly0214s0004
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF04539] Sigma-70 region 3; [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PF00140] Sigma-70 factor, region 1.2; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity
Coexpressed Gene List
Search : Show :Showing 1 to 50 of 200 records
Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0214s0004 [PF04539] Sigma-70 region 3; [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PF00140] Sigma-70 factor, region 1.2; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity 0.00 1.0000 1 Mapoly0024s0135 - 1.73 0.8597 2 Mapoly0047s0104 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 1.73 0.9019 3 Mapoly0115s0052 - 5.48 0.8555 4 Mapoly0076s0092 [GO:0005737] cytoplasm; [GO:0055114] oxidation-reduction process; [KOG2711] Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase; [GO:0006072] glycerol-3-phosphate metabolic process; [GO:0005975] carbohydrate metabolic process; [PF07479] NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PF01210] NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; [GO:0046168] glycerol-3-phosphate catabolic process; [PTHR11728] GLYCEROL-3-PHOSPHATE DEHYDROGENASE; [GO:0051287] NAD binding; [GO:0004367] glycerol-3-phosphate dehydrogenase [NAD+] activity; [GO:0009331] glycerol-3-phosphate dehydrogenase complex 5.66 0.8556 5 Mapoly0003s0136 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family 8.00 0.8726 6 Mapoly0117s0049 [GO:0008234] cysteine-type peptidase activity; [PF00396] Granulin; [PF08246] Cathepsin propeptide inhibitor domain (I29); [PF00112] Papain family cysteine protease; [KOG1543] Cysteine proteinase Cathepsin L; [PTHR12411] CYSTEINE PROTEASE FAMILY C1-RELATED; [GO:0006508] proteolysis 8.49 0.8481 7 Mapoly0136s0019 [GO:0044238] primary metabolic process; [PF02482] Sigma 54 modulation protein / S30EA ribosomal protein 8.49 0.8460 8 Mapoly0079s0067 [PF13450] NAD(P)-binding Rossmann-like domain; [PTHR16128] FAMILY NOT NAMED 11.22 0.8512 9 Mapoly0058s0084 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN 11.49 0.8117 10 Mapoly0147s0036 - 11.49 0.8530 11 Mapoly0057s0094 [PTHR31517] FAMILY NOT NAMED; [GO:0055114] oxidation-reduction process; [K00430] peroxidase [EC:1.11.1.7]; [PF00141] Peroxidase; [GO:0020037] heme binding; [1.11.1.7] Peroxidase.; [GO:0006979] response to oxidative stress; [GO:0004601] peroxidase activity 14.46 0.8148 12 Mapoly0006s0133 [GO:0055114] oxidation-reduction process; [K00430] peroxidase [EC:1.11.1.7]; [PF00141] Peroxidase; [GO:0020037] heme binding; [PTHR31235] FAMILY NOT NAMED; [1.11.1.7] Peroxidase.; [GO:0006979] response to oxidative stress; [GO:0004601] peroxidase activity 14.90 0.7901 13 Mapoly0047s0079 [PTHR31038] FAMILY NOT NAMED; [PF11891] Domain of unknown function (DUF3411) 17.94 0.8256 14 Mapoly0126s0041 [PTHR31723] FAMILY NOT NAMED 26.23 0.7510 15 Mapoly0170s0003 [PF01167] Tub family; [PTHR16517] TUBBY-RELATED; [PTHR16517:SF7] TUBBY PROTEIN-RELATED 28.28 0.7750 16 Mapoly0086s0032 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02835] peptide chain release factor RF-1; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity 28.72 0.8399 17 Mapoly0005s0232 - 29.75 0.7695 18 Mapoly0010s0157 [GO:0005524] ATP binding; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR20953] KINASE-RELATED; [PTHR20953:SF1] gb def: ENSANGP00000014191 (Fragment) 30.59 0.8071 19 Mapoly0055s0018 [GO:0003723] RNA binding; [K03595] GTP-binding protein Era; [PTHR11649:SF3] GTP-BINDING PROTEIN ERA; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding 31.94 0.8328 20 Mapoly0067s0096 [PF06421] GTP-binding protein LepA C-terminus; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [K03596] GTP-binding protein LepA; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2; [KOG0462] Elongation factor-type GTP-binding protein 32.40 0.8412 21 Mapoly0109s0018 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG0436] Methionyl-tRNA synthetase 33.75 0.8190 22 Mapoly0079s0024 - 34.06 0.7839 23 Mapoly0203s0012 [PF13855] Leucine rich repeat; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [PF00560] Leucine Rich Repeat; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE; [KOG0472] Leucine-rich repeat protein 34.64 0.7776 24 Mapoly0038s0087 [PF04674] Phosphate-induced protein 1 conserved region; [PTHR31279] FAMILY NOT NAMED 35.51 0.7446 25 Mapoly0047s0088 - 35.75 0.7630 26 Mapoly0040s0139 [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [PF10458] Valyl tRNA synthetase tRNA binding arm; [PF08264] Anticodon-binding domain of tRNA; [KOG0432] Valyl-tRNA synthetase; [6.1.1.9] Valine--tRNA ligase.; [GO:0004832] valine-tRNA ligase activity; [GO:0006438] valyl-tRNA aminoacylation; [K01873] valyl-tRNA synthetase [EC:6.1.1.9]; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity 38.18 0.8071 27 Mapoly0044s0045 [PF13855] Leucine rich repeat; [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF12819] Carbohydrate-binding protein of the ER; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 38.47 0.7596 28 Mapoly0021s0030 [K07071] DNA integrity scanning protein; [PF08338] Domain of unknown function (DUF1731); [PTHR11092] SUGAR NUCLEOTIDE EPIMERASE RELATED; [PF13460] NADH(P)-binding; [KOG3019] Predicted nucleoside-diphosphate sugar epimerase; [PTHR11092:SF1] NAD DEPENDENT EPIMERASE/DEHYDRATASE 38.83 0.8259 29 Mapoly0088s0035 [PF14368] Probable lipid transfer 38.83 0.7697 30 Mapoly0135s0048 [PF07173] Protein of unknown function (DUF1399) 39.38 0.7778 31 Mapoly0009s0232 - 40.40 0.6790 32 Mapoly0001s0360 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [KOG0881] Cyclophilin type peptidyl-prolyl cis-trans isomerase 40.62 0.8094 33 Mapoly0022s0166 [GO:0004871] signal transducer activity; [PF13426] PAS domain; [GO:0007165] signal transduction; [PTHR24351:SF29] SERINE/THREONINE-PROTEIN KINASE; [PTHR24351] RIBOSOMAL PROTEIN S6 KINASE 41.67 0.7353 34 Mapoly0168s0025 [PTHR10434] 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE; [KOG2848] 1-acyl-sn-glycerol-3-phosphate acyltransferase; [PF01553] Acyltransferase; [K00655] 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]; [2.3.1.51] 1-acylglycerol-3-phosphate O-acyltransferase.; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process 42.20 0.7297 35 Mapoly0037s0113 [GO:0003723] RNA binding; [PF07521] RNA-metabolising metallo-beta-lactamase; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [PTHR11203:SF22] BETA-LACTAMASE DOMAIN PROTEIN; [PF00753] Metallo-beta-lactamase superfamily; [GO:0016788] hydrolase activity, acting on ester bonds; [PF13837] Myb/SANT-like DNA-binding domain; [GO:0046872] metal ion binding 43.42 0.8005 36 Mapoly0003s0135 [GO:0005524] ATP binding; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [PTHR19211:SF7] ABC TRANSPORTER ABCF3, UUP; [KOG0927] Predicted transporter (ABC superfamily); [PF12848] ABC transporter; [PF00005] ABC transporter 45.83 0.8234 37 Mapoly0009s0187 [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PF00140] Sigma-70 factor, region 1.2; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity 46.04 0.7723 38 Mapoly0006s0126 [GO:0005199] structural constituent of cell wall; [GO:0009664] plant-type cell wall organization; [PF14368] Probable lipid transfer; [PTHR23201] EXTENSIN, PROLINE-RICH PROTEIN; [PF04554] Extensin-like region 46.65 0.7638 39 Mapoly0065s0012 [PF13855] Leucine rich repeat; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [PF00560] Leucine Rich Repeat; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE; [KOG0472] Leucine-rich repeat protein 47.02 0.7640 40 Mapoly0002s0205 - 47.12 0.7066 41 Mapoly0005s0278 [PF02033] Ribosome-binding factor A; [K02834] ribosome-binding factor A; [GO:0006364] rRNA processing 47.24 0.7907 42 Mapoly0006s0263 [PF04969] CS domain; [PF01202] Shikimate kinase; [PTHR21087] SHIKIMATE KINASE; [PTHR21087:SF3] gb def: Shikimate kinase 47.74 0.7798 43 Mapoly0085s0042 [PF04760] Translation initiation factor IF-2, N-terminal region; [PF11987] Translation-initiation factor 2; [K02519] translation initiation factor IF-2; [PF00009] Elongation factor Tu GTP binding domain; [PTHR23115:SF41] TRANSLATION INITIATION FACTOR IF-2; [GO:0003924] GTPase activity; [KOG1145] Mitochondrial translation initiation factor 2 (IF-2; GTPase); [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2 47.96 0.7780 44 Mapoly0001s0084 [PF13424] Tetratricopeptide repeat; [PF13374] Tetratricopeptide repeat; [KOG1840] Kinesin light chain; [PTHR19959] KINESIN LIGHT CHAIN 50.01 0.7679 45 Mapoly0336s0001 [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [KOG2289] Rhomboid family proteins; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis; [PTHR22936:SF12] gb def: Similar to membrane protein 50.50 0.7942 46 Mapoly0063s0012 [PF02696] Uncharacterized ACR, YdiU/UPF0061 family; [KOG2542] Uncharacterized conserved protein (YdiU family); [PTHR32057:SF1] SUBFAMILY NOT NAMED; [PTHR32057] FAMILY NOT NAMED 50.79 0.6823 47 Mapoly0009s0217 [PF11998] Protein of unknown function (DUF3493) 50.99 0.8147 48 Mapoly0136s0029 [PTHR32183] FAMILY NOT NAMED 51.09 0.8153 49 Mapoly0050s0024 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process 53.37 0.8210 50 Mapoly0033s0103 [GO:0005199] structural constituent of cell wall; [GO:0009664] plant-type cell wall organization; [PF14368] Probable lipid transfer; [PTHR23201] EXTENSIN, PROLINE-RICH PROTEIN; [PF04554] Extensin-like region 53.44 0.7733