Guide Gene

Gene ID
Mapoly0003s0136
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0003s0136 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family 0.00 1.0000
1 Mapoly0147s0036 -1.000.9253
2 Mapoly0003s0135 [GO:0005524] ATP binding; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [PTHR19211:SF7] ABC TRANSPORTER ABCF3, UUP; [KOG0927] Predicted transporter (ABC superfamily); [PF12848] ABC transporter; [PF00005] ABC transporter3.160.9219
3 Mapoly0086s0032 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02835] peptide chain release factor RF-1; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity3.460.9149
4 Mapoly0117s0049 [GO:0008234] cysteine-type peptidase activity; [PF00396] Granulin; [PF08246] Cathepsin propeptide inhibitor domain (I29); [PF00112] Papain family cysteine protease; [KOG1543] Cysteine proteinase Cathepsin L; [PTHR12411] CYSTEINE PROTEASE FAMILY C1-RELATED; [GO:0006508] proteolysis3.740.8945
5 Mapoly0115s0052 -5.390.8759
6 Mapoly0135s0007 -5.660.9108
7 Mapoly0076s0092 [GO:0005737] cytoplasm; [GO:0055114] oxidation-reduction process; [KOG2711] Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase; [GO:0006072] glycerol-3-phosphate metabolic process; [GO:0005975] carbohydrate metabolic process; [PF07479] NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PF01210] NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; [GO:0046168] glycerol-3-phosphate catabolic process; [PTHR11728] GLYCEROL-3-PHOSPHATE DEHYDROGENASE; [GO:0051287] NAD binding; [GO:0004367] glycerol-3-phosphate dehydrogenase [NAD+] activity; [GO:0009331] glycerol-3-phosphate dehydrogenase complex6.780.8847
8 Mapoly0136s0019 [GO:0044238] primary metabolic process; [PF02482] Sigma 54 modulation protein / S30EA ribosomal protein7.350.8781
9 Mapoly0214s0004 [PF04539] Sigma-70 region 3; [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PF00140] Sigma-70 factor, region 1.2; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity8.000.8726
10 Mapoly0067s0096 [PF06421] GTP-binding protein LepA C-terminus; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [K03596] GTP-binding protein LepA; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2; [KOG0462] Elongation factor-type GTP-binding protein8.060.9016
11 Mapoly0035s0022 [PTHR13253] FAMILY NOT NAMED; [PF00581] Rhodanese-like domain; [KOG1530] Rhodanese-related sulfurtransferase8.830.9012
12 Mapoly0042s0113 [PTHR13253] FAMILY NOT NAMED; [PF00581] Rhodanese-like domain; [KOG1530] Rhodanese-related sulfurtransferase8.940.8866
13 Mapoly0218s0001 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [KOG0880] Peptidyl-prolyl cis-trans isomerase9.170.8780
14 Mapoly0045s0091 [GO:0010207] photosystem II assembly; [PF13326] Photosystem II Pbs279.220.8912
15 Mapoly0015s0039 [PF14234] Domain of unknown function (DUF4336)10.390.8885
16 Mapoly0082s0035 [GO:0016020] membrane; [PF02517] CAAX protease self-immunity; [PTHR10794] ABHYDROLASE DOMAIN-CONTAINING PROTEIN; [K07052] TatD-related deoxyribonuclease12.250.8751
17 Mapoly0061s0126 -12.330.8980
18 Mapoly0002s0242 -13.750.9003
19 Mapoly0033s0078 [GO:0016020] membrane; [PTHR10906:SF2] PROTEIN TRANSLOCASE SECY SUBUNIT; [PF00344] SecY translocase; [GO:0015031] protein transport; [K10956] protein transport protein SEC61 subunit alpha; [PTHR10906] SECY/SEC61-ALPHA FAMILY MEMBER13.780.8974
20 Mapoly0047s0079 [PTHR31038] FAMILY NOT NAMED; [PF11891] Domain of unknown function (DUF3411)13.960.8578
21 Mapoly0021s0030 [K07071] DNA integrity scanning protein; [PF08338] Domain of unknown function (DUF1731); [PTHR11092] SUGAR NUCLEOTIDE EPIMERASE RELATED; [PF13460] NADH(P)-binding; [KOG3019] Predicted nucleoside-diphosphate sugar epimerase; [PTHR11092:SF1] NAD DEPENDENT EPIMERASE/DEHYDRATASE14.700.8967
22 Mapoly0082s0064 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding15.300.8979
23 Mapoly0079s0024 -16.120.8456
24 Mapoly0009s0217 [PF11998] Protein of unknown function (DUF3493)16.430.8939
25 Mapoly0063s0013 [PF10664] Cyanobacterial and plastid NDH-1 subunit M; [GO:0055114] oxidation-reduction process; [GO:0016655] oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor17.440.8914
26 Mapoly0184s0020 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [KOG0880] Peptidyl-prolyl cis-trans isomerase17.440.8879
27 Mapoly0006s0111 [PF11341] Protein of unknown function (DUF3143)17.610.8731
28 Mapoly0072s0101 -18.030.8946
29 Mapoly0047s0088 -18.410.8086
30 Mapoly0094s0070 [GO:0016020] membrane; [PTHR11384] ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER; [GO:0005524] ATP binding; [KOG0060] Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis); [PF06472] ABC transporter transmembrane region 2; [GO:0016887] ATPase activity; [GO:0006810] transport; [PTHR11384:SF3] ATP-BINDING CASSETTE, SUB-FAMILY D, MEMBER 4 (PEROXISOMAL MEMBRANE PROTEIN 69); [PF00005] ABC transporter19.800.8424
31 Mapoly0158s0023 [PF05479] Photosystem I reaction centre subunit N (PSAN or PSI-N); [GO:0042651] thylakoid membrane; [GO:0005516] calmodulin binding; [GO:0009522] photosystem I; [GO:0015979] photosynthesis20.000.8804
32 Mapoly0183s0013 [PTHR11947:SF3] PYRUVATE DEHYDROGENASE KINASE; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [KOG0787] Dehydrogenase kinase; [PF10436] Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase; [PTHR11947] PYRUVATE DEHYDROGENASE KINASE20.710.7973
33 Mapoly0009s0187 [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PF00140] Sigma-70 factor, region 1.2; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity21.070.8335
34 Mapoly0336s0001 [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [KOG2289] Rhomboid family proteins; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis; [PTHR22936:SF12] gb def: Similar to membrane protein22.720.8531
35 Mapoly0031s0111 -24.120.8206
36 Mapoly0002s0047 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED; [PTHR13068:SF6] gb def: agcp9491 [anopheles gambiae str. pest]24.250.8270
37 Mapoly0044s0020 [PTHR31446] FAMILY NOT NAMED; [PF02681] Divergent PAP2 family25.460.8301
38 Mapoly0001s0221 -28.640.8300
39 Mapoly0136s0029 [PTHR32183] FAMILY NOT NAMED28.980.8814
40 Mapoly0057s0089 [1.14.-.-] Acting on paired donors, with incorporation or reduction of molecular oxygen.; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [K06444] lycopene epsilon cyclase [EC:1.14.-.-]; [GO:0016117] carotenoid biosynthetic process; [PF05834] Lycopene cyclase protein; [PTHR13789] MONOOXYGENASE30.400.8314
41 Mapoly0006s0263 [PF04969] CS domain; [PF01202] Shikimate kinase; [PTHR21087] SHIKIMATE KINASE; [PTHR21087:SF3] gb def: Shikimate kinase30.810.8337
42 Mapoly0053s0015 -31.030.8120
43 Mapoly0005s0157 -31.810.8974
44 Mapoly0002s0231 [PTHR13253] FAMILY NOT NAMED; [PF00581] Rhodanese-like domain; [KOG1530] Rhodanese-related sulfurtransferase32.470.8708
45 Mapoly0001s0360 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [KOG0881] Cyclophilin type peptidyl-prolyl cis-trans isomerase32.500.8529
46 Mapoly0016s0090 -32.650.8786
47 Mapoly0113s0009 [PF12638] Staygreen protein; [PTHR31750] FAMILY NOT NAMED33.000.8722
48 Mapoly0003s0133 [K01738] cysteine synthase A [EC:2.5.1.47]; [PF00291] Pyridoxal-phosphate dependent enzyme; [2.5.1.47] Cysteine synthase.; [KOG1481] Cysteine synthase; [PTHR10314] SER/THR DEHYDRATASE, TRP SYNTHASE33.470.7672
49 Mapoly0002s0275 [GO:0050660] flavin adenine dinucleotide binding; [PF00743] Flavin-binding monooxygenase-like; [GO:0055114] oxidation-reduction process; [GO:0004499] N,N-dimethylaniline monooxygenase activity; [PTHR23023:SF4] DIMETHYLANILINE MONOOXYGENASE (FLAVIN-CONTAINING MONOOXYGENASE); [KOG1399] Flavin-containing monooxygenase; [PTHR23023] DIMETHYLANILINE MONOOXYGENASE; [1.14.13.8] Flavin-containing monooxygenase.; [GO:0050661] NADP binding; [K00485] dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.8]33.670.7774
50 Mapoly0020s0149 [PTHR32010] FAMILY NOT NAMED; [PF14870] Photosynthesis system II assembly factor YCF4833.670.8863
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