Guide Gene

Gene ID
Mapoly0001s0360
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [KOG0881] Cyclophilin type peptidyl-prolyl cis-trans isomerase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0001s0360 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [KOG0881] Cyclophilin type peptidyl-prolyl cis-trans isomerase 0.00 1.0000
1 Mapoly0005s0009 [PTHR10742:SF97] HETERODISULFIDE REDUCTASE, SUBUNIT A; [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [KOG4254] Phytoene desaturase1.000.9201
2 Mapoly0001s0154 [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [KOG0029] Amine oxidase2.000.8998
3 Mapoly0010s0157 [GO:0005524] ATP binding; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR20953] KINASE-RELATED; [PTHR20953:SF1] gb def: ENSANGP00000014191 (Fragment)2.450.8975
4 Mapoly0124s0017 [PTHR31053] FAMILY NOT NAMED; [GO:0055114] oxidation-reduction process; [PF02915] Rubrerythrin; [GO:0016491] oxidoreductase activity; [K04035] magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]; [1.14.13.81] Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase.; [GO:0046872] metal ion binding3.460.9015
5 Mapoly0109s0018 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG0436] Methionyl-tRNA synthetase4.470.8984
6 Mapoly0336s0001 [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [KOG2289] Rhomboid family proteins; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis; [PTHR22936:SF12] gb def: Similar to membrane protein4.900.8822
7 Mapoly0097s0040 [PF00501] AMP-binding enzyme; [KOG1176] Acyl-CoA synthetase; [PF13193] AMP-binding enzyme C-terminal domain; [GO:0008152] metabolic process; [PTHR24095] FAMILY NOT NAMED; [GO:0003824] catalytic activity5.480.8621
8 Mapoly0157s0001 [PTHR13779] HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED; [PF05673] Protein of unknown function (DUF815)6.240.8685
9 Mapoly0082s0064 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding6.630.9056
10 Mapoly0036s0017 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PF13041] PPR repeat family; [GO:0005634] nucleus; [PTHR12683:SF10] PREDICTED PROTEIN; [PTHR12683] FAMILY NOT NAMED; [GO:0007049] cell cycle7.140.8579
11 Mapoly0101s0060 [GO:0051537] 2 iron, 2 sulfur cluster binding; [GO:0010277] chlorophyllide a oxygenase [overall] activity; [GO:0055114] oxidation-reduction process; [PF08417] Pheophorbide a oxygenase; [K13600] chlorophyllide a oxygenase [EC:1.13.12.14]; [PTHR21266] IRON-SULFUR DOMAIN CONTAINING PROTEIN; [GO:0016491] oxidoreductase activity; [PF00355] Rieske [2Fe-2S] domain; [PTHR21266:SF19] OXIDASE/CHLOROPHYLL SYNTHASE; [1.13.12.14] Transferred entry: 1.14.13.122.8.370.8648
12 Mapoly0094s0038 [KOG1401] Acetylornithine aminotransferase; [K01845] glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]; [PTHR11986] AMINOTRANSFERASE CLASS III; [GO:0030170] pyridoxal phosphate binding; [GO:0008483] transaminase activity; [5.4.3.8] Glutamate-1-semialdehyde 2,1-aminomutase.; [PF00202] Aminotransferase class-III8.770.8790
13 Mapoly0032s0090 [PTHR20982] RIBOSOME RECYCLING FACTOR; [KOG4759] Ribosome recycling factor; [PF01765] Ribosome recycling factor; [K02838] ribosome recycling factor; [GO:0006412] translation9.170.8888
14 Mapoly0147s0036 -9.800.8741
15 Mapoly0056s0075 -10.490.8801
16 Mapoly0065s0012 [PF13855] Leucine rich repeat; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [PF00560] Leucine Rich Repeat; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE; [KOG0472] Leucine-rich repeat protein11.360.8313
17 Mapoly0085s0042 [PF04760] Translation initiation factor IF-2, N-terminal region; [PF11987] Translation-initiation factor 2; [K02519] translation initiation factor IF-2; [PF00009] Elongation factor Tu GTP binding domain; [PTHR23115:SF41] TRANSLATION INITIATION FACTOR IF-2; [GO:0003924] GTPase activity; [KOG1145] Mitochondrial translation initiation factor 2 (IF-2; GTPase); [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 212.690.8535
18 Mapoly0047s0104 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family15.100.8559
19 Mapoly0056s0024 [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PTHR22594:SF6] ASPARTYL-TRNA SYNTHETASE; [GO:0006421] asparaginyl-tRNA aminoacylation; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [6.1.1.22] Asparagine--tRNA ligase.; [KOG0554] Asparaginyl-tRNA synthetase (mitochondrial); [K01893] asparaginyl-tRNA synthetase [EC:6.1.1.22]; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004816] asparagine-tRNA ligase activity; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)15.870.8544
20 Mapoly0001s0363 -15.940.7607
21 Mapoly0021s0030 [K07071] DNA integrity scanning protein; [PF08338] Domain of unknown function (DUF1731); [PTHR11092] SUGAR NUCLEOTIDE EPIMERASE RELATED; [PF13460] NADH(P)-binding; [KOG3019] Predicted nucleoside-diphosphate sugar epimerase; [PTHR11092:SF1] NAD DEPENDENT EPIMERASE/DEHYDRATASE16.160.8817
22 Mapoly0064s0088 [PTHR10229:SF0] GTP-BINDING PROTEIN HFLX; [PF01926] 50S ribosome-binding GTPase; [KOG0410] Predicted GTP binding protein; [PTHR10229] GTP-BINDING PROTEIN HFLX; [PF13167] GTP-binding GTPase N-terminal; [K03665] GTP-binding protein HflX; [GO:0005525] GTP binding16.730.8421
23 Mapoly0016s0010 [PTHR11778] SERYL-TRNA SYNTHETASE; [GO:0004828] serine-tRNA ligase activity; [GO:0005524] ATP binding; [K01875] seryl-tRNA synthetase [EC:6.1.1.11]; [GO:0006434] seryl-tRNA aminoacylation; [GO:0005737] cytoplasm; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [KOG2509] Seryl-tRNA synthetase; [PF02403] Seryl-tRNA synthetase N-terminal domain; [GO:0000166] nucleotide binding; [6.1.1.11] Serine--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity17.550.8499
24 Mapoly0032s0077 [PF00190] Cupin; [GO:0045735] nutrient reservoir activity; [PTHR31238] FAMILY NOT NAMED17.550.8302
25 Mapoly3765s0001 [PF08263] Leucine rich repeat N-terminal domain; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE17.890.7979
26 Mapoly0098s0053 [GO:0005524] ATP binding; [PTHR11752] HELICASE SKI2W; [KOG0947] Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF08148] DSHCT (NUC185) domain; [GO:0003676] nucleic acid binding; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides18.250.8369
27 Mapoly0086s0033 [PF02929] Beta galactosidase small chain; [PF02837] Glycosyl hydrolases family 2, sugar binding domain; [PF02836] Glycosyl hydrolases family 2, TIM barrel domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0009341] beta-galactosidase complex; [K01190] beta-galactosidase [EC:3.2.1.23]; [GO:0005975] carbohydrate metabolic process; [3.2.1.23] Beta-galactosidase.; [PF00703] Glycosyl hydrolases family 2; [GO:0004565] beta-galactosidase activity; [PTHR10066] BETA-GALACTOSIDASE18.710.8058
28 Mapoly0186s0003 [GO:0005524] ATP binding; [GO:0006426] glycyl-tRNA aminoacylation; [GO:0005737] cytoplasm; [PF02092] Glycyl-tRNA synthetase beta subunit; [PTHR30075] GLYCYL-TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [PF02091] Glycyl-tRNA synthetase alpha subunit; [6.1.1.14] Glycine--tRNA ligase.; [GO:0004820] glycine-tRNA ligase activity; [K14164] glycyl-tRNA synthetase [EC:6.1.1.14]19.340.8541
29 Mapoly0015s0009 [GO:0006779] porphyrin-containing compound biosynthetic process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [KOG2872] Uroporphyrinogen decarboxylase; [PF01208] Uroporphyrinogen decarboxylase (URO-D); [GO:0004853] uroporphyrinogen decarboxylase activity20.490.8316
30 Mapoly0005s0038 [KOG2743] Cobalamin synthesis protein; [PTHR13748:SF11] PRLI-INTERACTING FACTOR L; [PF07683] Cobalamin synthesis protein cobW C-terminal domain; [PTHR13748] COBW-RELATED; [PF02492] CobW/HypB/UreG, nucleotide-binding domain22.630.8593
31 Mapoly0021s0119 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin24.270.8471
32 Mapoly0097s0055 [PF00448] SRP54-type protein, GTPase domain; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [K03110] fused signal recognition particle receptor; [PF02881] SRP54-type protein, helical bundle domain; [GO:0005525] GTP binding; [PTHR11564] GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS26.720.8233
33 Mapoly0024s0135 -26.830.8161
34 Mapoly0068s0047 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [K08914] light-harvesting complex II chlorophyll a/b binding protein 3; [GO:0009765] photosynthesis, light harvesting27.500.8577
35 Mapoly0094s0013 -27.930.8097
36 Mapoly0072s0003 [GO:0000287] magnesium ion binding; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0004826] phenylalanine-tRNA ligase activity; [6.1.1.20] Phenylalanine--tRNA ligase.; [GO:0043039] tRNA aminoacylation; [GO:0006432] phenylalanyl-tRNA aminoacylation; [K01889] phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]; [PTHR11538] PHENYLALANYL-TRNA SYNTHETASE; [GO:0000049] tRNA binding; [GO:0008033] tRNA processing; [PF03147] Ferredoxin-fold anticodon binding domain; [GO:0004812] aminoacyl-tRNA ligase activity; [KOG2783] Phenylalanyl-tRNA synthetase; [PF01409] tRNA synthetases class II core domain (F)30.000.8243
37 Mapoly0159s0002 -30.020.8227
38 Mapoly0061s0140 [KOG2972] Uncharacterized conserved protein; [PTHR12532:SF0] SUBFAMILY NOT NAMED; [PTHR12532] UNCHARACTERIZED; [PF01709] Transcriptional regulator30.580.8219
39 Mapoly0100s0026 [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [KOG0374] Serine/threonine specific protein phosphatase PP1, catalytic subunit31.140.7851
40 Mapoly0040s0139 [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [PF10458] Valyl tRNA synthetase tRNA binding arm; [PF08264] Anticodon-binding domain of tRNA; [KOG0432] Valyl-tRNA synthetase; [6.1.1.9] Valine--tRNA ligase.; [GO:0004832] valine-tRNA ligase activity; [GO:0006438] valyl-tRNA aminoacylation; [K01873] valyl-tRNA synthetase [EC:6.1.1.9]; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity31.940.8425
41 Mapoly0003s0136 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family32.500.8529
42 Mapoly0103s0078 [GO:0006779] porphyrin-containing compound biosynthetic process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [KOG2872] Uroporphyrinogen decarboxylase; [PF01208] Uroporphyrinogen decarboxylase (URO-D); [GO:0004853] uroporphyrinogen decarboxylase activity35.210.8557
43 Mapoly0049s0067 [PF06203] CCT motif; [GO:0005515] protein binding; [GO:0008270] zinc ion binding; [GO:0005622] intracellular; [PF00643] B-box zinc finger; [PTHR31874] FAMILY NOT NAMED36.440.7400
44 Mapoly0045s0055 -37.090.7928
45 Mapoly0058s0006 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [K02717] photosystem II oxygen-evolving enhancer protein 2; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis37.500.8350
46 Mapoly0051s0001 [GO:0006433] prolyl-tRNA aminoacylation; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [PTHR11451:SF6] PROLYL-TRNA SYNTHETASE; [GO:0004827] proline-tRNA ligase activity; [KOG4163] Prolyl-tRNA synthetase; [PTHR11451] TRNA SYNTHETASE-RELATED; [PF03129] Anticodon binding domain; [6.1.1.15] Proline--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF09180] Prolyl-tRNA synthetase, C-terminal; [K01881] prolyl-tRNA synthetase [EC:6.1.1.15]37.990.8342
47 Mapoly0055s0018 [GO:0003723] RNA binding; [K03595] GTP-binding protein Era; [PTHR11649:SF3] GTP-BINDING PROTEIN ERA; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding38.540.8519
48 Mapoly0015s0196 [PTHR11624] DEHYDROGENASE RELATED; [K01662] 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]; [GO:0008661] 1-deoxy-D-xylulose-5-phosphate synthase activity; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [GO:0003824] catalytic activity; [2.2.1.7] 1-deoxy-D-xylulose-5-phosphate synthase.; [PF02780] Transketolase, C-terminal domain; [PF13292] 1-deoxy-D-xylulose-5-phosphate synthase; [GO:0016114] terpenoid biosynthetic process; [KOG0523] Transketolase39.520.8055
49 Mapoly0159s0012 [PTHR22749] RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE; [GO:0009231] riboflavin biosynthetic process; [GO:0008531] riboflavin kinase activity; [PF01687] Riboflavin kinase; [KOG3110] Riboflavin kinase39.570.7927
50 Mapoly0063s0054 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family40.210.8260
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