Guide Gene

Gene ID
Mapoly0049s0067
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF06203] CCT motif; [GO:0005515] protein binding; [GO:0008270] zinc ion binding; [GO:0005622] intracellular; [PF00643] B-box zinc finger; [PTHR31874] FAMILY NOT NAMED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0049s0067 [PF06203] CCT motif; [GO:0005515] protein binding; [GO:0008270] zinc ion binding; [GO:0005622] intracellular; [PF00643] B-box zinc finger; [PTHR31874] FAMILY NOT NAMED 0.00 1.0000
1 Mapoly0086s0033 [PF02929] Beta galactosidase small chain; [PF02837] Glycosyl hydrolases family 2, sugar binding domain; [PF02836] Glycosyl hydrolases family 2, TIM barrel domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0009341] beta-galactosidase complex; [K01190] beta-galactosidase [EC:3.2.1.23]; [GO:0005975] carbohydrate metabolic process; [3.2.1.23] Beta-galactosidase.; [PF00703] Glycosyl hydrolases family 2; [GO:0004565] beta-galactosidase activity; [PTHR10066] BETA-GALACTOSIDASE5.290.7760
2 Mapoly0015s0009 [GO:0006779] porphyrin-containing compound biosynthetic process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [KOG2872] Uroporphyrinogen decarboxylase; [PF01208] Uroporphyrinogen decarboxylase (URO-D); [GO:0004853] uroporphyrinogen decarboxylase activity5.390.7777
3 Mapoly0060s0001 -11.490.6868
4 Mapoly0029s0043 -11.620.7526
5 Mapoly0036s0017 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PF13041] PPR repeat family; [GO:0005634] nucleus; [PTHR12683:SF10] PREDICTED PROTEIN; [PTHR12683] FAMILY NOT NAMED; [GO:0007049] cell cycle12.810.7567
6 Mapoly0146s0017 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE13.420.7189
7 Mapoly0024s0094 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PF00249] Myb-like DNA-binding domain; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [GO:0003682] chromatin binding15.810.7009
8 Mapoly0157s0009 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR31496] FAMILY NOT NAMED16.880.7145
9 Mapoly0044s0135 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family17.230.7381
10 Mapoly0157s0001 [PTHR13779] HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED; [PF05673] Protein of unknown function (DUF815)17.660.7674
11 Mapoly0045s0055 -18.140.7415
12 Mapoly0001s0363 -18.890.7061
13 Mapoly0336s0001 [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [KOG2289] Rhomboid family proteins; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis; [PTHR22936:SF12] gb def: Similar to membrane protein27.390.7502
14 Mapoly0070s0076 [PF11805] Protein of unknown function (DUF3326)27.460.7176
15 Mapoly0012s0111 -29.150.6863
16 Mapoly0094s0013 -29.850.7224
17 Mapoly0083s0057 -30.500.6522
18 Mapoly0034s0078 [PF02670] 1-deoxy-D-xylulose 5-phosphate reductoisomerase; [GO:0055114] oxidation-reduction process; [GO:0070402] NADPH binding; [GO:0005515] protein binding; [PF08436] 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; [GO:0008299] isoprenoid biosynthetic process; [K00099] 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]; [1.1.1.267] 1-deoxy-D-xylulose-5-phosphate reductoisomerase.; [PTHR30525] 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE; [GO:0046872] metal ion binding; [PF13288] DXP reductoisomerase C-terminal domain; [GO:0030604] 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity32.250.6995
19 Mapoly0146s0029 [PF05097] Protein of unknown function (DUF688)33.050.6939
20 Mapoly0091s0087 [KOG3591] Alpha crystallins; [PTHR11527] SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY; [PF00011] Hsp20/alpha crystallin family36.410.6637
21 Mapoly0001s0360 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [KOG0881] Cyclophilin type peptidyl-prolyl cis-trans isomerase36.440.7400
22 Mapoly0010s0214 [PF01476] LysM domain36.520.7047
23 Mapoly0043s0083 [GO:0016161] beta-amylase activity; [GO:0000272] polysaccharide catabolic process; [PTHR31352] FAMILY NOT NAMED; [PF01373] Glycosyl hydrolase family 14; [3.2.1.2] Beta-amylase.; [K01177] beta-amylase [EC:3.2.1.2]38.160.6230
24 Mapoly0024s0045 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE41.420.6627
25 Mapoly0146s0034 [KOG1187] Serine/threonine protein kinase; [PF07714] Protein tyrosine kinase; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE43.270.6667
26 Mapoly0045s0147 [PF03151] Triose-phosphate Transporter family; [PTHR11132] SOLUTE CARRIER FAMILY 35; [KOG1444] Nucleotide-sugar transporter VRG4/SQV-7; [PTHR11132:SF23] SOLUTE CARRIER FAMILY 35 MEMBER C244.090.6449
27 Mapoly0097s0040 [PF00501] AMP-binding enzyme; [KOG1176] Acyl-CoA synthetase; [PF13193] AMP-binding enzyme C-terminal domain; [GO:0008152] metabolic process; [PTHR24095] FAMILY NOT NAMED; [GO:0003824] catalytic activity44.290.7103
28 Mapoly0006s0263 [PF04969] CS domain; [PF01202] Shikimate kinase; [PTHR21087] SHIKIMATE KINASE; [PTHR21087:SF3] gb def: Shikimate kinase45.250.7124
29 Mapoly0056s0024 [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PTHR22594:SF6] ASPARTYL-TRNA SYNTHETASE; [GO:0006421] asparaginyl-tRNA aminoacylation; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [6.1.1.22] Asparagine--tRNA ligase.; [KOG0554] Asparaginyl-tRNA synthetase (mitochondrial); [K01893] asparaginyl-tRNA synthetase [EC:6.1.1.22]; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004816] asparagine-tRNA ligase activity; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)45.370.7146
30 Mapoly0048s0089 [GO:0008864] formyltetrahydrofolate deformylase activity; [GO:0009058] biosynthetic process; [PTHR10520] TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED; [PTHR10520:SF7] FORMYLTETRAHYDROFOLATE DEFORMYLASE; [3.5.1.10] Formyltetrahydrofolate deformylase.; [GO:0006189] 'de novo' IMP biosynthetic process; [KOG3076] 5'-phosphoribosylglycinamide formyltransferase; [GO:0016742] hydroxymethyl-, formyl- and related transferase activity; [PF00551] Formyl transferase; [K01433] formyltetrahydrofolate deformylase [EC:3.5.1.10]45.500.6472
31 Mapoly0061s0009 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)46.310.6801
32 Mapoly0069s0069 [GO:0003677] DNA binding; [KOG0483] Transcription factor HEX, contains HOX and HALZ domains; [GO:0006355] regulation of transcription, DNA-dependent; [PF00046] Homeobox domain; [PF02183] Homeobox associated leucine zipper; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [PTHR24326] FAMILY NOT NAMED; [K09338] homeobox-leucine zipper protein; [PF04618] HD-ZIP protein N terminus46.430.6659
33 Mapoly0126s0029 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR11514] MYC48.520.5706
34 Mapoly0069s0060 [KOG2462] C2H2-type Zn-finger protein; [PTHR10593] SERINE/THREONINE-PROTEIN KINASE RIO50.410.6160
35 Mapoly0087s0006 [GO:0051716] cellular response to stimulus; [GO:0046658] anchored to plasma membrane; [PF05558] DREPP plasma membrane polypeptide52.760.6876
36 Mapoly0055s0018 [GO:0003723] RNA binding; [K03595] GTP-binding protein Era; [PTHR11649:SF3] GTP-BINDING PROTEIN ERA; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding54.680.7252
37 Mapoly0057s0068 [PTHR14155] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding56.120.6513
38 Mapoly0094s0038 [KOG1401] Acetylornithine aminotransferase; [K01845] glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]; [PTHR11986] AMINOTRANSFERASE CLASS III; [GO:0030170] pyridoxal phosphate binding; [GO:0008483] transaminase activity; [5.4.3.8] Glutamate-1-semialdehyde 2,1-aminomutase.; [PF00202] Aminotransferase class-III56.390.7095
39 Mapoly0092s0023 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PF01479] S4 domain57.270.5963
40 Mapoly0001s0427 [PTHR31580] FAMILY NOT NAMED; [PF05911] Plant protein of unknown function (DUF869)58.270.6846
41 Mapoly0054s0037 [KOG0725] Reductases with broad range of substrate specificities; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [K13606] chlorophyll(ide) b reductase [EC:1.1.1.294]; [PF00106] short chain dehydrogenase; [1.1.1.294] Chlorophyll(ide) b reductase.; [PTHR24314] FAMILY NOT NAMED59.770.7102
42 Mapoly0015s0196 [PTHR11624] DEHYDROGENASE RELATED; [K01662] 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]; [GO:0008661] 1-deoxy-D-xylulose-5-phosphate synthase activity; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [GO:0003824] catalytic activity; [2.2.1.7] 1-deoxy-D-xylulose-5-phosphate synthase.; [PF02780] Transketolase, C-terminal domain; [PF13292] 1-deoxy-D-xylulose-5-phosphate synthase; [GO:0016114] terpenoid biosynthetic process; [KOG0523] Transketolase60.600.6977
43 Mapoly0009s0187 [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PF00140] Sigma-70 factor, region 1.2; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity62.550.7013
44 Mapoly0029s0082 [GO:0005524] ATP binding; [K01876] aspartyl-tRNA synthetase [EC:6.1.1.12]; [GO:0016874] ligase activity; [6.1.1.12] Aspartate--tRNA ligase.; [PF02938] GAD domain; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [KOG2411] Aspartyl-tRNA synthetase, mitochondrial; [PTHR22594:SF5] ASPARTYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)63.030.6908
45 Mapoly0002s0294 [PTHR24414] FAMILY NOT NAMED; [GO:0005515] protein binding; [KOG4693] Uncharacterized conserved protein, contains kelch repeat; [PF01344] Kelch motif; [PF00646] F-box domain63.500.6578
46 Mapoly0056s0075 -65.190.7104
47 Mapoly0001s0027 [PF01471] Putative peptidoglycan binding domain68.450.6084
48 Mapoly0131s0006 [GO:0048046] apoplast; [GO:0016762] xyloglucan:xyloglucosyl transferase activity; [GO:0006073] cellular glucan metabolic process; [PTHR31062] FAMILY NOT NAMED; [PF06955] Xyloglucan endo-transglycosylase (XET) C-terminus; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF00722] Glycosyl hydrolases family 16; [GO:0005618] cell wall72.460.6767
49 Mapoly0097s0055 [PF00448] SRP54-type protein, GTPase domain; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [K03110] fused signal recognition particle receptor; [PF02881] SRP54-type protein, helical bundle domain; [GO:0005525] GTP binding; [PTHR11564] GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS74.500.6810
50 Mapoly0147s0036 -78.630.7056
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