Guide Gene

Gene ID
Mapoly0157s0001
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR13779] HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED; [PF05673] Protein of unknown function (DUF815)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0157s0001 [PTHR13779] HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED; [PF05673] Protein of unknown function (DUF815) 0.00 1.0000
1 Mapoly0336s0001 [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [KOG2289] Rhomboid family proteins; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis; [PTHR22936:SF12] gb def: Similar to membrane protein3.460.8697
2 Mapoly0001s0360 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [KOG0881] Cyclophilin type peptidyl-prolyl cis-trans isomerase6.240.8685
3 Mapoly0082s0064 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding6.560.8748
4 Mapoly0109s0018 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG0436] Methionyl-tRNA synthetase8.940.8659
5 Mapoly0049s0121 [PTHR10891:SF372] SUBFAMILY NOT NAMED; [KOG0028] Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PTHR10891] EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN; [PF01699] Sodium/calcium exchanger protein; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding9.270.8109
6 Mapoly0010s0157 [GO:0005524] ATP binding; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR20953] KINASE-RELATED; [PTHR20953:SF1] gb def: ENSANGP00000014191 (Fragment)10.490.8490
7 Mapoly0124s0017 [PTHR31053] FAMILY NOT NAMED; [GO:0055114] oxidation-reduction process; [PF02915] Rubrerythrin; [GO:0016491] oxidoreductase activity; [K04035] magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]; [1.14.13.81] Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase.; [GO:0046872] metal ion binding11.220.8569
8 Mapoly0103s0078 [GO:0006779] porphyrin-containing compound biosynthetic process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [KOG2872] Uroporphyrinogen decarboxylase; [PF01208] Uroporphyrinogen decarboxylase (URO-D); [GO:0004853] uroporphyrinogen decarboxylase activity16.120.8627
9 Mapoly0049s0067 [PF06203] CCT motif; [GO:0005515] protein binding; [GO:0008270] zinc ion binding; [GO:0005622] intracellular; [PF00643] B-box zinc finger; [PTHR31874] FAMILY NOT NAMED17.660.7674
10 Mapoly0005s0009 [PTHR10742:SF97] HETERODISULFIDE REDUCTASE, SUBUNIT A; [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [KOG4254] Phytoene desaturase18.490.8500
11 Mapoly0136s0029 [PTHR32183] FAMILY NOT NAMED18.970.8604
12 Mapoly0055s0018 [GO:0003723] RNA binding; [K03595] GTP-binding protein Era; [PTHR11649:SF3] GTP-BINDING PROTEIN ERA; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding20.780.8521
13 Mapoly0057s0006 [GO:0055114] oxidation-reduction process; [PF02800] Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; [PF00044] Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; [GO:0016620] oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor; [1.2.1.13] Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating).; [KOG0657] Glyceraldehyde 3-phosphate dehydrogenase; [PTHR10836] GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE; [K05298] glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13]22.000.8481
14 Mapoly0058s0006 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [K02717] photosystem II oxygen-evolving enhancer protein 2; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis28.980.8327
15 Mapoly0005s0038 [KOG2743] Cobalamin synthesis protein; [PTHR13748:SF11] PRLI-INTERACTING FACTOR L; [PF07683] Cobalamin synthesis protein cobW C-terminal domain; [PTHR13748] COBW-RELATED; [PF02492] CobW/HypB/UreG, nucleotide-binding domain29.090.8382
16 Mapoly0039s0070 [PF06825] Heat shock factor binding protein 1; [KOG4117] Heat shock factor binding protein; [PTHR19424] HEAT SHOCK FACTOR BINDING PROTEIN 129.240.7709
17 Mapoly0098s0038 [PF00650] CRAL/TRIO domain; [PTHR10174] RETINALDEHYDE BINDING PROTEIN-RELATED; [KOG1471] Phosphatidylinositol transfer protein SEC14 and related proteins29.580.8288
18 Mapoly0068s0097 [KOG1575] Voltage-gated shaker-like K+ channel, subunit beta/KCNAB; [PTHR11732:SF7] ALDO-KETO REDUCTASE; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family30.380.8429
19 Mapoly0032s0077 [PF00190] Cupin; [GO:0045735] nutrient reservoir activity; [PTHR31238] FAMILY NOT NAMED31.130.8026
20 Mapoly0001s0363 -31.650.7278
21 Mapoly0048s0095 [GO:0016020] membrane; [GO:0005524] ATP binding; [GO:0017038] protein import; [PF07516] SecA Wing and Scaffold domain; [PTHR30612] SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM; [PF07517] SecA DEAD-like domain; [PF01043] SecA preprotein cross-linking domain; [K03070] preprotein translocase subunit SecA31.840.8284
22 Mapoly0009s0217 [PF11998] Protein of unknown function (DUF3493)33.470.8421
23 Mapoly0056s0075 -35.240.8266
24 Mapoly0036s0017 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PF13041] PPR repeat family; [GO:0005634] nucleus; [PTHR12683:SF10] PREDICTED PROTEIN; [PTHR12683] FAMILY NOT NAMED; [GO:0007049] cell cycle36.210.7889
25 Mapoly0043s0143 [PF00687] Ribosomal protein L1p/L10e family; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG1569] 50S ribosomal protein L137.310.8441
26 Mapoly0001s0154 [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [KOG0029] Amine oxidase39.500.8120
27 Mapoly0040s0099 [6.6.1.1] Magnesium chelatase.; [GO:0016851] magnesium chelatase activity; [PF01078] Magnesium chelatase, subunit ChlI; [GO:0015995] chlorophyll biosynthetic process; [K03405] magnesium chelatase subunit I [EC:6.6.1.1]; [GO:0015979] photosynthesis40.620.8413
28 Mapoly0067s0096 [PF06421] GTP-binding protein LepA C-terminus; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [K03596] GTP-binding protein LepA; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2; [KOG0462] Elongation factor-type GTP-binding protein41.570.8402
29 Mapoly0184s0020 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [KOG0880] Peptidyl-prolyl cis-trans isomerase42.430.8360
30 Mapoly0097s0040 [PF00501] AMP-binding enzyme; [KOG1176] Acyl-CoA synthetase; [PF13193] AMP-binding enzyme C-terminal domain; [GO:0008152] metabolic process; [PTHR24095] FAMILY NOT NAMED; [GO:0003824] catalytic activity42.780.7918
31 Mapoly0015s0196 [PTHR11624] DEHYDROGENASE RELATED; [K01662] 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]; [GO:0008661] 1-deoxy-D-xylulose-5-phosphate synthase activity; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [GO:0003824] catalytic activity; [2.2.1.7] 1-deoxy-D-xylulose-5-phosphate synthase.; [PF02780] Transketolase, C-terminal domain; [PF13292] 1-deoxy-D-xylulose-5-phosphate synthase; [GO:0016114] terpenoid biosynthetic process; [KOG0523] Transketolase42.990.7904
32 Mapoly0168s0025 [PTHR10434] 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE; [KOG2848] 1-acyl-sn-glycerol-3-phosphate acyltransferase; [PF01553] Acyltransferase; [K00655] 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]; [2.3.1.51] 1-acylglycerol-3-phosphate O-acyltransferase.; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process43.410.7349
33 Mapoly0153s0005 [PF06485] Protein of unknown function (DUF1092)43.590.8363
34 Mapoly0056s0024 [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PTHR22594:SF6] ASPARTYL-TRNA SYNTHETASE; [GO:0006421] asparaginyl-tRNA aminoacylation; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [6.1.1.22] Asparagine--tRNA ligase.; [KOG0554] Asparaginyl-tRNA synthetase (mitochondrial); [K01893] asparaginyl-tRNA synthetase [EC:6.1.1.22]; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004816] asparagine-tRNA ligase activity; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)44.360.8041
35 Mapoly0068s0047 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [K08914] light-harvesting complex II chlorophyll a/b binding protein 3; [GO:0009765] photosynthesis, light harvesting45.690.8232
36 Mapoly0102s0025 [K02699] photosystem I subunit XI; [PF02605] Photosystem I reaction centre subunit XI; [GO:0009538] photosystem I reaction center; [GO:0009522] photosystem I; [GO:0015979] photosynthesis46.310.8208
37 Mapoly0001s0025 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [K08915] light-harvesting complex II chlorophyll a/b binding protein 4; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting46.730.8121
38 Mapoly0112s0045 [GO:0004659] prenyltransferase activity; [K02548] 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]; [PTHR13929] 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE; [GO:0016021] integral to membrane; [2.5.1.74] 1,4-dihydroxy-2-naphthoate polyprenyltransferase.; [KOG4581] Predicted membrane protein; [PF01040] UbiA prenyltransferase family46.800.8231
39 Mapoly0186s0003 [GO:0005524] ATP binding; [GO:0006426] glycyl-tRNA aminoacylation; [GO:0005737] cytoplasm; [PF02092] Glycyl-tRNA synthetase beta subunit; [PTHR30075] GLYCYL-TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [PF02091] Glycyl-tRNA synthetase alpha subunit; [6.1.1.14] Glycine--tRNA ligase.; [GO:0004820] glycine-tRNA ligase activity; [K14164] glycyl-tRNA synthetase [EC:6.1.1.14]47.500.8067
40 Mapoly0032s0090 [PTHR20982] RIBOSOME RECYCLING FACTOR; [KOG4759] Ribosome recycling factor; [PF01765] Ribosome recycling factor; [K02838] ribosome recycling factor; [GO:0006412] translation48.500.8237
41 Mapoly0020s0149 [PTHR32010] FAMILY NOT NAMED; [PF14870] Photosynthesis system II assembly factor YCF4848.610.8397
42 Mapoly0113s0009 [PF12638] Staygreen protein; [PTHR31750] FAMILY NOT NAMED50.950.8317
43 Mapoly0147s0036 -52.650.8115
44 Mapoly0061s0126 -52.760.8294
45 Mapoly0206s0012 [PTHR11693] ATP SYNTHASE GAMMA CHAIN; [PF00231] ATP synthase; [3.6.3.14] H(+)-transporting two-sector ATPase.; [PTHR11693:SF21] ATP SYNTHASE GAMMA SUBUNIT; [GO:0046961] proton-transporting ATPase activity, rotational mechanism; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [GO:0045261] proton-transporting ATP synthase complex, catalytic core F(1); [K02115] F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]; [GO:0015986] ATP synthesis coupled proton transport; [KOG1531] F0F1-type ATP synthase, gamma subunit53.190.8306
46 Mapoly0118s0023 -54.840.8231
47 Mapoly0086s0032 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02835] peptide chain release factor RF-1; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity57.690.8230
48 Mapoly0066s0050 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [K08909] light-harvesting complex I chlorophyll a/b binding protein 3; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting58.480.8090
49 Mapoly0101s0060 [GO:0051537] 2 iron, 2 sulfur cluster binding; [GO:0010277] chlorophyllide a oxygenase [overall] activity; [GO:0055114] oxidation-reduction process; [PF08417] Pheophorbide a oxygenase; [K13600] chlorophyllide a oxygenase [EC:1.13.12.14]; [PTHR21266] IRON-SULFUR DOMAIN CONTAINING PROTEIN; [GO:0016491] oxidoreductase activity; [PF00355] Rieske [2Fe-2S] domain; [PTHR21266:SF19] OXIDASE/CHLOROPHYLL SYNTHASE; [1.13.12.14] Transferred entry: 1.14.13.122.60.600.7890
50 Mapoly0094s0038 [KOG1401] Acetylornithine aminotransferase; [K01845] glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]; [PTHR11986] AMINOTRANSFERASE CLASS III; [GO:0030170] pyridoxal phosphate binding; [GO:0008483] transaminase activity; [5.4.3.8] Glutamate-1-semialdehyde 2,1-aminomutase.; [PF00202] Aminotransferase class-III60.930.7912
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