Guide Gene
- Gene ID
- Mapoly0098s0053
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0005524] ATP binding; [PTHR11752] HELICASE SKI2W; [KOG0947] Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF08148] DSHCT (NUC185) domain; [GO:0003676] nucleic acid binding; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0098s0053 [GO:0005524] ATP binding; [PTHR11752] HELICASE SKI2W; [KOG0947] Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF08148] DSHCT (NUC185) domain; [GO:0003676] nucleic acid binding; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.00 1.0000 1 Mapoly0085s0042 [PF04760] Translation initiation factor IF-2, N-terminal region; [PF11987] Translation-initiation factor 2; [K02519] translation initiation factor IF-2; [PF00009] Elongation factor Tu GTP binding domain; [PTHR23115:SF41] TRANSLATION INITIATION FACTOR IF-2; [GO:0003924] GTPase activity; [KOG1145] Mitochondrial translation initiation factor 2 (IF-2; GTPase); [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2 1.00 0.9092 2 Mapoly0186s0003 [GO:0005524] ATP binding; [GO:0006426] glycyl-tRNA aminoacylation; [GO:0005737] cytoplasm; [PF02092] Glycyl-tRNA synthetase beta subunit; [PTHR30075] GLYCYL-TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [PF02091] Glycyl-tRNA synthetase alpha subunit; [6.1.1.14] Glycine--tRNA ligase.; [GO:0004820] glycine-tRNA ligase activity; [K14164] glycyl-tRNA synthetase [EC:6.1.1.14] 4.00 0.8772 3 Mapoly0036s0017 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PF13041] PPR repeat family; [GO:0005634] nucleus; [PTHR12683:SF10] PREDICTED PROTEIN; [PTHR12683] FAMILY NOT NAMED; [GO:0007049] cell cycle 5.00 0.8519 4 Mapoly0035s0041 [PTHR14009] LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN; [PF07766] LETM1-like protein 5.74 0.8298 5 Mapoly0086s0033 [PF02929] Beta galactosidase small chain; [PF02837] Glycosyl hydrolases family 2, sugar binding domain; [PF02836] Glycosyl hydrolases family 2, TIM barrel domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0009341] beta-galactosidase complex; [K01190] beta-galactosidase [EC:3.2.1.23]; [GO:0005975] carbohydrate metabolic process; [3.2.1.23] Beta-galactosidase.; [PF00703] Glycosyl hydrolases family 2; [GO:0004565] beta-galactosidase activity; [PTHR10066] BETA-GALACTOSIDASE 7.94 0.8112 6 Mapoly0008s0194 [6.6.1.1] Magnesium chelatase.; [PF02514] CobN/Magnesium Chelatase; [PF11965] Domain of unknown function (DUF3479); [GO:0009058] biosynthetic process; [GO:0016851] magnesium chelatase activity; [PTHR23304] SPOT2-RELATED; [K03403] magnesium chelatase subunit H [EC:6.6.1.1] 8.00 0.8207 7 Mapoly3765s0001 [PF08263] Leucine rich repeat N-terminal domain; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 8.49 0.8074 8 Mapoly0005s0009 [PTHR10742:SF97] HETERODISULFIDE REDUCTASE, SUBUNIT A; [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [KOG4254] Phytoene desaturase 9.49 0.8591 9 Mapoly0038s0061 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 9.70 0.7851 10 Mapoly0001s0400 [GO:0016020] membrane; [PF00571] CBS domain; [GO:0006821] chloride transport; [PF00654] Voltage gated chloride channel; [GO:0055085] transmembrane transport; [GO:0005247] voltage-gated chloride channel activity; [KOG0475] Cl- channel CLC-3 and related proteins (CLC superfamily); [GO:0030554] adenyl nucleotide binding; [PTHR11689] CHLORIDE CHANNEL 10.39 0.8032 11 Mapoly0109s0018 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG0436] Methionyl-tRNA synthetase 10.58 0.8543 12 Mapoly0015s0011 [GO:0005524] ATP binding; [PF03461] TRCF domain; [PF00270] DEAD/DEAH box helicase; [GO:0006281] DNA repair; [PF00271] Helicase conserved C-terminal domain; [PF02559] CarD-like/TRCF domain; [KOG0344] ATP-dependent RNA helicase; [GO:0003676] nucleic acid binding; [PTHR14025] FAMILY NOT NAMED 10.95 0.8007 13 Mapoly0043s0049 [K07033] mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]; [PF01458] Uncharacterized protein family (UPF0051); [PTHR30508:SF1] FES CLUSTER ASSEMBLY PROTEIN SUFB; [PTHR30508] FES CLUSTER ASSEMBLY PROTEIN SUF; [GO:0016226] iron-sulfur cluster assembly 11.09 0.7932 14 Mapoly0023s0082 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 11.31 0.8004 15 Mapoly0100s0035 [PTHR12270:SF6] GLYCOSYLTRANSFERASE-RELATED; [KOG3765] Predicted glycosyltransferase; [PF13896] Glycosyl-transferase for dystroglycan; [PTHR12270] GLYCOSYLTRANSFERASE-RELATED 11.31 0.7179 16 Mapoly0064s0088 [PTHR10229:SF0] GTP-BINDING PROTEIN HFLX; [PF01926] 50S ribosome-binding GTPase; [KOG0410] Predicted GTP binding protein; [PTHR10229] GTP-BINDING PROTEIN HFLX; [PF13167] GTP-binding GTPase N-terminal; [K03665] GTP-binding protein HflX; [GO:0005525] GTP binding 11.49 0.8298 17 Mapoly0113s0004 [GO:0005524] ATP binding; [KOG1051] Chaperone HSP104 and related ATP-dependent Clp proteases; [PF02151] UvrB/uvrC motif; [PF07724] AAA domain (Cdc48 subfamily); [GO:0005515] protein binding; [PF02861] Clp amino terminal domain; [PF10431] C-terminal, D2-small domain, of ClpB protein; [PTHR11638] ATP-DEPENDENT CLP PROTEASE; [PF00004] ATPase family associated with various cellular activities (AAA); [K03696] ATP-dependent Clp protease ATP-binding subunit ClpC; [GO:0019538] protein metabolic process 11.66 0.7975 18 Mapoly0063s0054 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 12.12 0.8459 19 Mapoly0101s0060 [GO:0051537] 2 iron, 2 sulfur cluster binding; [GO:0010277] chlorophyllide a oxygenase [overall] activity; [GO:0055114] oxidation-reduction process; [PF08417] Pheophorbide a oxygenase; [K13600] chlorophyllide a oxygenase [EC:1.13.12.14]; [PTHR21266] IRON-SULFUR DOMAIN CONTAINING PROTEIN; [GO:0016491] oxidoreductase activity; [PF00355] Rieske [2Fe-2S] domain; [PTHR21266:SF19] OXIDASE/CHLOROPHYLL SYNTHASE; [1.13.12.14] Transferred entry: 1.14.13.122. 13.04 0.8345 20 Mapoly0055s0072 [PTHR16254] POTASSIUM/PROTON ANTIPORTER-RELATED; [GO:0015299] solute:hydrogen antiporter activity; [GO:0016021] integral to membrane; [KOG1650] Predicted K+/H+-antiporter; [GO:0055085] transmembrane transport; [GO:0006813] potassium ion transport; [PF02254] TrkA-N domain; [GO:0006812] cation transport; [PF00999] Sodium/hydrogen exchanger family 13.27 0.7341 21 Mapoly0031s0123 [PF13812] Pentatricopeptide repeat domain; [PTHR31407] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF02037] SAP domain 13.64 0.8483 22 Mapoly0002s0267 [KOG0448] Mitofusin 1 GTPase, involved in mitochondrila biogenesis; [PF01926] 50S ribosome-binding GTPase; [PTHR11649:SF36] PUTATIVE UNCHARACTERIZED PROTEIN; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [GO:0005525] GTP binding 13.96 0.7956 23 Mapoly0094s0038 [KOG1401] Acetylornithine aminotransferase; [K01845] glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]; [PTHR11986] AMINOTRANSFERASE CLASS III; [GO:0030170] pyridoxal phosphate binding; [GO:0008483] transaminase activity; [5.4.3.8] Glutamate-1-semialdehyde 2,1-aminomutase.; [PF00202] Aminotransferase class-III 14.42 0.8381 24 Mapoly0104s0008 - 15.36 0.7636 25 Mapoly0010s0072 [PTHR10196] SUGAR KINASE; [PF02782] FGGY family of carbohydrate kinases, C-terminal domain; [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [GO:0005975] carbohydrate metabolic process; [PF00370] FGGY family of carbohydrate kinases, N-terminal domain 15.97 0.8171 26 Mapoly0138s0034 [KOG2019] Metalloendoprotease HMP1 (insulinase superfamily); [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF08367] Peptidase M16C associated; [PF00675] Insulinase (Peptidase family M16); [GO:0006508] proteolysis; [K06972] ribosomal RNA large subunit methyltransferase F [EC:2.1.1.181] 16.61 0.7337 27 Mapoly0003s0298 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 17.15 0.8226 28 Mapoly0001s0360 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [KOG0881] Cyclophilin type peptidyl-prolyl cis-trans isomerase 18.25 0.8369 29 Mapoly0114s0038 [PF13812] Pentatricopeptide repeat domain; [PTHR13547] UNCHARACTERIZED; [PTHR13547:SF2] gb def: hypothetical protein [arabidopsis thaliana]; [PF11977] Zc3h12a-like Ribonuclease NYN domain 19.75 0.8222 30 Mapoly0002s0142 - 19.90 0.8134 31 Mapoly0040s0139 [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [PF10458] Valyl tRNA synthetase tRNA binding arm; [PF08264] Anticodon-binding domain of tRNA; [KOG0432] Valyl-tRNA synthetase; [6.1.1.9] Valine--tRNA ligase.; [GO:0004832] valine-tRNA ligase activity; [GO:0006438] valyl-tRNA aminoacylation; [K01873] valyl-tRNA synthetase [EC:6.1.1.9]; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity 23.64 0.8297 32 Mapoly0122s0011 [GO:0005524] ATP binding; [KOG0327] Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031:SF114] MITOCHONDRIAL DEAD BOX PROTEIN, PUTATIVE; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 23.92 0.7874 33 Mapoly0111s0056 [GO:0003723] RNA binding; [PF10150] Ribonuclease E/G family; [PTHR30001] RIBONUCLEASE; [PF00686] Starch binding domain 24.37 0.8084 34 Mapoly0163s0012 [GO:0003723] RNA binding; [GO:0005524] ATP binding; [PF00579] tRNA synthetases class I (W and Y); [PTHR11766:SF0] SUBFAMILY NOT NAMED; [GO:0000166] nucleotide binding; [KOG2623] Tyrosyl-tRNA synthetase; [K01866] tyrosyl-tRNA synthetase [EC:6.1.1.1]; [PTHR11766] TYROSYL-TRNA SYNTHETASE; [6.1.1.1] Tyrosine--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [PF01479] S4 domain; [GO:0004831] tyrosine-tRNA ligase activity; [GO:0004812] aminoacyl-tRNA ligase activity 24.98 0.7829 35 Mapoly0040s0083 [PF13650] Aspartyl protease 26.46 0.7974 36 Mapoly0003s0001 [K04567] lysyl-tRNA synthetase, class II [EC:6.1.1.6]; [GO:0005524] ATP binding; [6.1.1.6] Lysine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [KOG1885] Lysyl-tRNA synthetase (class II); [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N) 27.39 0.8051 37 Mapoly0149s0024 [KOG0560] Sulfite reductase (ferredoxin); [PTHR11493:SF45] gb def: cg10700 gene product [drosophila melanogaster]; [GO:0055114] oxidation-reduction process; [K00392] sulfite reductase (ferredoxin) [EC:1.8.7.1]; [PF03460] Nitrite/Sulfite reductase ferredoxin-like half domain; [1.8.7.1] Sulfite reductase (ferredoxin).; [GO:0016491] oxidoreductase activity; [GO:0020037] heme binding; [GO:0051536] iron-sulfur cluster binding; [PF01077] Nitrite and sulphite reductase 4Fe-4S domain; [PTHR11493] FAMILY NOT NAMED 28.14 0.7590 38 Mapoly0002s0095 [PF07719] Tetratricopeptide repeat; [PTHR21262] GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE; [PF13328] HD domain; [PF04607] Region found in RelA / SpoT proteins; [KOG1157] Predicted guanosine polyphosphate pyrophosphohydrolase/synthase; [GO:0015969] guanosine tetraphosphate metabolic process; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding 28.57 0.7144 39 Mapoly0098s0045 - 28.64 0.6730 40 Mapoly0056s0024 [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PTHR22594:SF6] ASPARTYL-TRNA SYNTHETASE; [GO:0006421] asparaginyl-tRNA aminoacylation; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [6.1.1.22] Asparagine--tRNA ligase.; [KOG0554] Asparaginyl-tRNA synthetase (mitochondrial); [K01893] asparaginyl-tRNA synthetase [EC:6.1.1.22]; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004816] asparagine-tRNA ligase activity; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N) 29.17 0.8080 41 Mapoly0037s0113 [GO:0003723] RNA binding; [PF07521] RNA-metabolising metallo-beta-lactamase; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [PTHR11203:SF22] BETA-LACTAMASE DOMAIN PROTEIN; [PF00753] Metallo-beta-lactamase superfamily; [GO:0016788] hydrolase activity, acting on ester bonds; [PF13837] Myb/SANT-like DNA-binding domain; [GO:0046872] metal ion binding 31.62 0.8119 42 Mapoly0015s0152 [K02294] beta-carotene hydroxylase [EC:1.14.13.-]; [1.14.13.-] With NADH or NADPH as one donor, and incorporation of one atom of oxygen.; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0006633] fatty acid biosynthetic process; [GO:0016491] oxidoreductase activity; [PF04116] Fatty acid hydroxylase superfamily; [PTHR31899] FAMILY NOT NAMED 31.75 0.7366 43 Mapoly0037s0067 [PF07719] Tetratricopeptide repeat 32.25 0.7729 44 Mapoly0022s0156 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [KOG4280] Kinesin-like protein; [GO:0005871] kinesin complex; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity 33.41 0.7337 45 Mapoly0151s0033 [PTHR11079] CYTOSINE DEAMINASE; [GO:0009231] riboflavin biosynthetic process; [GO:0008703] 5-amino-6-(5-phosphoribosylamino)uracil reductase activity; [GO:0055114] oxidation-reduction process; [PF01872] RibD C-terminal domain; [PF08719] Domain of unknown function (DUF1768) 35.50 0.7510 46 Mapoly0081s0052 - 36.41 0.7454 47 Mapoly0079s0067 [PF13450] NAD(P)-binding Rossmann-like domain; [PTHR16128] FAMILY NOT NAMED 36.66 0.8021 48 Mapoly0005s0038 [KOG2743] Cobalamin synthesis protein; [PTHR13748:SF11] PRLI-INTERACTING FACTOR L; [PF07683] Cobalamin synthesis protein cobW C-terminal domain; [PTHR13748] COBW-RELATED; [PF02492] CobW/HypB/UreG, nucleotide-binding domain 38.99 0.8120 49 Mapoly0047s0104 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 39.17 0.8038 50 Mapoly0016s0072 [GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis 39.95 0.7905