Guide Gene

Gene ID
Mapoly0002s0095
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF07719] Tetratricopeptide repeat; [PTHR21262] GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE; [PF13328] HD domain; [PF04607] Region found in RelA / SpoT proteins; [KOG1157] Predicted guanosine polyphosphate pyrophosphohydrolase/synthase; [GO:0015969] guanosine tetraphosphate metabolic process; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0002s0095 [PF07719] Tetratricopeptide repeat; [PTHR21262] GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE; [PF13328] HD domain; [PF04607] Region found in RelA / SpoT proteins; [KOG1157] Predicted guanosine polyphosphate pyrophosphohydrolase/synthase; [GO:0015969] guanosine tetraphosphate metabolic process; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding 0.00 1.0000
1 Mapoly0181s0007 -2.000.7546
2 Mapoly0042s0028 [KOG4172] Predicted E3 ubiquitin ligase; [PTHR10044] INHIBITOR OF APOPTOSIS; [PF13920] Zinc finger, C3HC4 type (RING finger)7.350.7105
3 Mapoly0138s0034 [KOG2019] Metalloendoprotease HMP1 (insulinase superfamily); [PTHR11851] METALLOPROTEASE; [PF05193] Peptidase M16 inactive domain; [PF08367] Peptidase M16C associated; [PF00675] Insulinase (Peptidase family M16); [GO:0006508] proteolysis; [K06972] ribosomal RNA large subunit methyltransferase F [EC:2.1.1.181]7.420.7075
4 Mapoly0105s0038 [3.4.24.-] Metalloendopeptidases.; [GO:0004222] metalloendopeptidase activity; [GO:0005524] ATP binding; [K03798] cell division protease FtsH [EC:3.4.24.-]; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis7.750.7887
5 Mapoly0035s0150 [PTHR21262] GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE; [PF13328] HD domain; [PF04607] Region found in RelA / SpoT proteins; [GO:0015969] guanosine tetraphosphate metabolic process10.490.7165
6 Mapoly0055s0072 [PTHR16254] POTASSIUM/PROTON ANTIPORTER-RELATED; [GO:0015299] solute:hydrogen antiporter activity; [GO:0016021] integral to membrane; [KOG1650] Predicted K+/H+-antiporter; [GO:0055085] transmembrane transport; [GO:0006813] potassium ion transport; [PF02254] TrkA-N domain; [GO:0006812] cation transport; [PF00999] Sodium/hydrogen exchanger family10.580.6945
7 Mapoly0003s0123 [GO:0005524] ATP binding; [PTHR19211:SF26] SUBFAMILY NOT NAMED; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [KOG0927] Predicted transporter (ABC superfamily); [PF12848] ABC transporter; [PF00005] ABC transporter12.960.7210
8 Mapoly0085s0042 [PF04760] Translation initiation factor IF-2, N-terminal region; [PF11987] Translation-initiation factor 2; [K02519] translation initiation factor IF-2; [PF00009] Elongation factor Tu GTP binding domain; [PTHR23115:SF41] TRANSLATION INITIATION FACTOR IF-2; [GO:0003924] GTPase activity; [KOG1145] Mitochondrial translation initiation factor 2 (IF-2; GTPase); [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 215.970.7461
9 Mapoly0169s0024 [3.4.24.-] Metalloendopeptidases.; [GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [K03798] cell division protease FtsH [EC:3.4.24.-]; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis17.150.6979
10 Mapoly0025s0092 [PF10358] N-terminal C2 in EEIG1 and EHBP1 proteins; [PF01476] LysM domain17.660.7066
11 Mapoly0014s0004 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0752] Mitochondrial solute carrier protein20.200.7109
12 Mapoly0082s0009 [PF10184] Uncharacterized conserved protein (DUF2358); [PTHR22750] G-PROTEIN COUPLED RECEPTOR; [KOG4457] Uncharacterized conserved protein20.490.6878
13 Mapoly0104s0008 -21.210.6793
14 Mapoly0079s0021 [GO:0030001] metal ion transport; [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [PTHR24093] FAMILY NOT NAMED; [PF00403] Heavy-metal-associated domain; [GO:0046872] metal ion binding; [KOG0207] Cation transport ATPase; [PF00122] E1-E2 ATPase24.600.6371
15 Mapoly0098s0045 -25.100.6436
16 Mapoly0043s0049 [K07033] mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]; [PF01458] Uncharacterized protein family (UPF0051); [PTHR30508:SF1] FES CLUSTER ASSEMBLY PROTEIN SUFB; [PTHR30508] FES CLUSTER ASSEMBLY PROTEIN SUF; [GO:0016226] iron-sulfur cluster assembly27.710.6827
17 Mapoly0033s0170 [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [PF08323] Starch synthase catalytic domain; [PTHR12526] GLYCOSYLTRANSFERASE27.930.7017
18 Mapoly0058s0036 [KOG0776] Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase; [PTHR12001] GERANYLGERANYL PYROPHOSPHATE SYNTHASE; [2.5.1.84] All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific).; [GO:0008299] isoprenoid biosynthetic process; [PF00348] Polyprenyl synthetase; [2.5.1.85] All-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific).; [PTHR12001:SF18] SOLANESYL DIPHOSPHATE SYNTHASE; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [K05356] all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]; [GO:0015979] photosynthesis28.530.6840
19 Mapoly0098s0053 [GO:0005524] ATP binding; [PTHR11752] HELICASE SKI2W; [KOG0947] Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF08148] DSHCT (NUC185) domain; [GO:0003676] nucleic acid binding; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides28.570.7144
20 Mapoly0040s0104 [GO:0009058] biosynthetic process; [KOG1459] Squalene synthetase; [K02291] phytoene synthase [EC:2.5.1.32]; [2.5.1.32] 15-cis-phytoene synthase.; [GO:0016740] transferase activity; [PTHR31480] FAMILY NOT NAMED; [PF00494] Squalene/phytoene synthase28.640.6467
21 Mapoly0007s0019 [PF12014] Domain of unknown function (DUF3506)32.310.6572
22 Mapoly0020s0161 [1.14.19.-] With oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water.; [PTHR32100] FAMILY NOT NAMED; [PF00487] Fatty acid desaturase; [K10255] omega-6 fatty acid desaturase (delta-12 desaturase) [EC:1.14.19.-]; [GO:0006629] lipid metabolic process33.760.6952
23 Mapoly0002s0075 [GO:0005097] Rab GTPase activator activity; [PTHR22957] TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN; [GO:0032313] regulation of Rab GTPase activity; [PTHR22957:SF24] MICROTUBULE-ASSOCIATED PROTEIN-RELATED; [PF00566] Rab-GTPase-TBC domain; [KOG1091] Ypt/Rab-specific GTPase-activating protein GYP639.190.6589
24 Mapoly0014s0165 -41.690.6178
25 Mapoly0154s0039 [PF01713] Smr domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family42.000.6413
26 Mapoly0043s0122 [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [PTHR24093] FAMILY NOT NAMED; [GO:0046872] metal ion binding; [KOG0207] Cation transport ATPase; [PF00122] E1-E2 ATPase45.280.6155
27 Mapoly0022s0156 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [KOG4280] Kinesin-like protein; [GO:0005871] kinesin complex; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity53.570.6573
28 Mapoly0112s0016 [PF00571] CBS domain; [KOG2118] Predicted membrane protein, contains two CBS domains; [PF01595] Domain of unknown function DUF21; [PTHR22777] HEMOLYSIN-RELATED; [GO:0030554] adenyl nucleotide binding; [PF03471] Transporter associated domain54.440.6555
29 Mapoly0035s0114 [PTHR16254] POTASSIUM/PROTON ANTIPORTER-RELATED; [GO:0015299] solute:hydrogen antiporter activity; [GO:0016021] integral to membrane; [KOG1650] Predicted K+/H+-antiporter; [GO:0006813] potassium ion transport; [GO:0055085] transmembrane transport; [PF02254] TrkA-N domain; [GO:0006812] cation transport; [PF00999] Sodium/hydrogen exchanger family54.670.7114
30 Mapoly0135s0004 [PTHR32060] FAMILY NOT NAMED; [PF03572] Peptidase family S41; [GO:0008236] serine-type peptidase activity; [GO:0005515] protein binding; [PF13180] PDZ domain; [GO:0006508] proteolysis; [PTHR32060:SF0] SUBFAMILY NOT NAMED61.070.6584
31 Mapoly0100s0035 [PTHR12270:SF6] GLYCOSYLTRANSFERASE-RELATED; [KOG3765] Predicted glycosyltransferase; [PF13896] Glycosyl-transferase for dystroglycan; [PTHR12270] GLYCOSYLTRANSFERASE-RELATED61.430.5936
32 Mapoly0082s0008 [GO:0016020] membrane; [K14445] solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5; [GO:0006814] sodium ion transport; [KOG1281] Na+/dicarboxylate, Na+/tricarboxylate and phosphate transporters; [GO:0055085] transmembrane transport; [PTHR10283] SOLUTE CARRIER FAMILY 13 MEMBER; [PF00939] Sodium:sulfate symporter transmembrane region; [GO:0005215] transporter activity64.160.6829
33 Mapoly0067s0096 [PF06421] GTP-binding protein LepA C-terminus; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [K03596] GTP-binding protein LepA; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2; [KOG0462] Elongation factor-type GTP-binding protein71.620.7101
34 Mapoly0042s0013 -74.300.5919
35 Mapoly0051s0030 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0758] Mitochondrial carnitine-acylcarnitine carrier protein; [K03454] mitochondrial carrier protein, MC family78.220.6633
36 Mapoly0048s0095 [GO:0016020] membrane; [GO:0005524] ATP binding; [GO:0017038] protein import; [PF07516] SecA Wing and Scaffold domain; [PTHR30612] SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM; [PF07517] SecA DEAD-like domain; [PF01043] SecA preprotein cross-linking domain; [K03070] preprotein translocase subunit SecA81.060.6900
37 Mapoly0003s0298 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family81.200.6898
38 Mapoly0002s0267 [KOG0448] Mitofusin 1 GTPase, involved in mitochondrila biogenesis; [PF01926] 50S ribosome-binding GTPase; [PTHR11649:SF36] PUTATIVE UNCHARACTERIZED PROTEIN; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [GO:0005525] GTP binding83.430.6416
39 Mapoly0036s0017 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PF13041] PPR repeat family; [GO:0005634] nucleus; [PTHR12683:SF10] PREDICTED PROTEIN; [PTHR12683] FAMILY NOT NAMED; [GO:0007049] cell cycle91.650.6478
40 Mapoly0008s0099 [GO:0016020] membrane; [PF02517] CAAX protease self-immunity92.560.6244
41 Mapoly0022s0049 [PF08547] Complex I intermediate-associated protein 30 (CIA30); [PF13460] NADH(P)-binding; [KOG1203] Predicted dehydrogenase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE93.350.6851
42 Mapoly0041s0090 [2.6.1.2] Alanine transaminase.; [K00814] alanine transaminase [EC:2.6.1.2]; [GO:0009058] biosynthetic process; [GO:0030170] pyridoxal phosphate binding; [PF00155] Aminotransferase class I and II; [KOG0258] Alanine aminotransferase; [PTHR11751] SUBGROUP I AMINOTRANSFERASE RELATED93.740.6741
43 Mapoly0009s0197 [GO:0005524] ATP binding; [PTHR11584:SF316] SIMILAR TO PHOSPHATIDYLETHANOLAMINE METHYLTRANSFERASE PUTATIVE UNCHARACTERIZED; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [KOG0594] Protein kinase PCTAIRE and related kinases; [PTHR11584] SERINE/THREONINE PROTEIN KINASE96.170.6938
44 Mapoly0047s0088 -98.500.6462
45 Mapoly0133s0008 [KOG0610] Putative serine/threonine protein kinase; [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [K08282] non-specific serine/threonine protein kinase [EC:2.7.11.1]; [GO:0004672] protein kinase activity; [GO:0004871] signal transducer activity; [PF13426] PAS domain; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0007165] signal transduction; [GO:0006468] protein phosphorylation; [PTHR24351] RIBOSOMAL PROTEIN S6 KINASE107.700.6405
46 Mapoly0040s0014 [PF05542] Protein of unknown function (DUF760)109.860.5798
47 Mapoly0124s0017 [PTHR31053] FAMILY NOT NAMED; [GO:0055114] oxidation-reduction process; [PF02915] Rubrerythrin; [GO:0016491] oxidoreductase activity; [K04035] magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]; [1.14.13.81] Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase.; [GO:0046872] metal ion binding111.770.6625
48 Mapoly0062s0041 [GO:0055114] oxidation-reduction process; [PF00175] Oxidoreductase NAD-binding domain; [PTHR19384] FLAVODOXIN-RELATED; [GO:0016491] oxidoreductase activity; [PF00970] Oxidoreductase FAD-binding domain; [1.18.1.2] Ferredoxin--NADP(+) reductase.; [K02641] ferredoxin--NADP+ reductase [EC:1.18.1.2]113.010.6662
49 Mapoly0010s0005 [GO:0016020] membrane; [PF14570] RING/Ubox like zinc-binding domain; [PTHR13301] X-BOX TRANSCRIPTION FACTOR-RELATED; [GO:0016760] cellulose synthase (UDP-forming) activity; [GO:0030244] cellulose biosynthetic process; [PF03552] Cellulose synthase115.800.6386
50 Mapoly3765s0001 [PF08263] Leucine rich repeat N-terminal domain; [PF12799] Leucine Rich repeats (2 copies); [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE117.470.6319
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