Guide Gene

Gene ID
Mapoly0040s0104
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0009058] biosynthetic process; [KOG1459] Squalene synthetase; [K02291] phytoene synthase [EC:2.5.1.32]; [2.5.1.32] 15-cis-phytoene synthase.; [GO:0016740] transferase activity; [PTHR31480] FAMILY NOT NAMED; [PF00494] Squalene/phytoene synthase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0040s0104 [GO:0009058] biosynthetic process; [KOG1459] Squalene synthetase; [K02291] phytoene synthase [EC:2.5.1.32]; [2.5.1.32] 15-cis-phytoene synthase.; [GO:0016740] transferase activity; [PTHR31480] FAMILY NOT NAMED; [PF00494] Squalene/phytoene synthase 0.00 1.0000
1 Mapoly0058s0036 [KOG0776] Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase; [PTHR12001] GERANYLGERANYL PYROPHOSPHATE SYNTHASE; [2.5.1.84] All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific).; [GO:0008299] isoprenoid biosynthetic process; [PF00348] Polyprenyl synthetase; [2.5.1.85] All-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific).; [PTHR12001:SF18] SOLANESYL DIPHOSPHATE SYNTHASE; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [K05356] all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]; [GO:0015979] photosynthesis1.000.7737
2 Mapoly0014s0180 [GO:0003677] DNA binding; [PF02178] AT hook motif2.450.7040
3 Mapoly0020s0161 [1.14.19.-] With oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water.; [PTHR32100] FAMILY NOT NAMED; [PF00487] Fatty acid desaturase; [K10255] omega-6 fatty acid desaturase (delta-12 desaturase) [EC:1.14.19.-]; [GO:0006629] lipid metabolic process4.000.7727
4 Mapoly0051s0030 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0758] Mitochondrial carnitine-acylcarnitine carrier protein; [K03454] mitochondrial carrier protein, MC family21.330.7103
5 Mapoly0003s0123 [GO:0005524] ATP binding; [PTHR19211:SF26] SUBFAMILY NOT NAMED; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [KOG0927] Predicted transporter (ABC superfamily); [PF12848] ABC transporter; [PF00005] ABC transporter24.390.6909
6 Mapoly0002s0095 [PF07719] Tetratricopeptide repeat; [PTHR21262] GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE; [PF13328] HD domain; [PF04607] Region found in RelA / SpoT proteins; [KOG1157] Predicted guanosine polyphosphate pyrophosphohydrolase/synthase; [GO:0015969] guanosine tetraphosphate metabolic process; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding28.640.6467
7 Mapoly0023s0024 [PF02672] CP12 domain30.500.7493
8 Mapoly0082s0008 [GO:0016020] membrane; [K14445] solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5; [GO:0006814] sodium ion transport; [KOG1281] Na+/dicarboxylate, Na+/tricarboxylate and phosphate transporters; [GO:0055085] transmembrane transport; [PTHR10283] SOLUTE CARRIER FAMILY 13 MEMBER; [PF00939] Sodium:sulfate symporter transmembrane region; [GO:0005215] transporter activity35.890.6879
9 Mapoly0022s0049 [PF08547] Complex I intermediate-associated protein 30 (CIA30); [PF13460] NADH(P)-binding; [KOG1203] Predicted dehydrogenase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE35.940.7139
10 Mapoly0079s0021 [GO:0030001] metal ion transport; [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [PTHR24093] FAMILY NOT NAMED; [PF00403] Heavy-metal-associated domain; [GO:0046872] metal ion binding; [KOG0207] Cation transport ATPase; [PF00122] E1-E2 ATPase39.500.6154
11 Mapoly0010s0017 [KOG2605] OTU (ovarian tumor)-like cysteine protease; [PTHR12419:SF8] UNCHARACTERIZED; [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PF02338] OTU-like cysteine protease47.140.6724
12 Mapoly0045s0098 [K00630] glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]; [PF14829] Glycerol-3-phosphate acyltransferase N-terminal; [PF01553] Acyltransferase; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [GO:0004366] glycerol-3-phosphate O-acyltransferase activity; [2.3.1.15] Glycerol-3-phosphate 1-O-acyltransferase.65.930.6858
13 Mapoly0020s0027 [GO:0003951] NAD+ kinase activity; [KOG2178] Predicted sugar kinase; [GO:0006741] NADP biosynthetic process; [GO:0008152] metabolic process; [PTHR20275] FAMILY NOT NAMED; [PF01513] ATP-NAD kinase70.360.6321
14 Mapoly0002s0250 [PTHR19288] 4-NITROPHENYLPHOSPHATASE-RELATED; [KOG2882] p-Nitrophenyl phosphatase; [PF13344] Haloacid dehalogenase-like hydrolase; [PF13242] HAD-hyrolase-like70.710.6751
15 Mapoly0105s0038 [3.4.24.-] Metalloendopeptidases.; [GO:0004222] metalloendopeptidase activity; [GO:0005524] ATP binding; [K03798] cell division protease FtsH [EC:3.4.24.-]; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis75.860.6650
16 Mapoly0015s0044 [PTHR10996:SF22] HYDROXYPYRUVATE REDUCTASE; [GO:0055114] oxidation-reduction process; [KOG0069] Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily); [PTHR10996] 2-HYDROXYACID DEHYDROGENASE-RELATED; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0008152] metabolic process; [GO:0051287] NAD binding; [PF02826] D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; [PF00389] D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain81.610.6699
17 Mapoly0073s0080 [GO:0016020] membrane; [GO:0055114] oxidation-reduction process; [PF11909] NADH-quinone oxidoreductase cyanobacterial subunit N; [GO:0016655] oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor88.020.6690
18 Mapoly0100s0033 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR23042] CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS88.910.5380
19 Mapoly0014s0057 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily89.650.6472
20 Mapoly0037s0130 [K00507] stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1]; [KOG1600] Fatty acid desaturase; [PTHR11351:SF2] DELTA 9 DESATURASE; [1.14.19.1] Stearoyl-CoA 9-desaturase.; [PF00487] Fatty acid desaturase; [PTHR11351] ACYL-COA DESATURASE; [GO:0006629] lipid metabolic process92.010.6502
21 Mapoly0032s0099 [PTHR10742] AMINE OXIDASE; [1.14.99.30] Transferred entry: 1.3.5.6.; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [K00514] zeta-carotene desaturase [EC:1.14.99.30]; [KOG0029] Amine oxidase92.390.6593
22 Mapoly0111s0010 [PF07911] Protein of unknown function (DUF1677)93.330.5182
23 Mapoly0001s0423 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase95.240.6182
24 Mapoly0029s0018 [GO:0055114] oxidation-reduction process; [GO:0030091] protein repair; [PTHR10173] METHIONINE SULFOXIDE REDUCTASE; [1.8.4.11] Peptide-methionine (S)-S-oxide reductase.; [GO:0006979] response to oxidative stress; [GO:0008113] peptide-methionine (S)-S-oxide reductase activity; [GO:0016671] oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; [K07304] peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]; [PF01625] Peptide methionine sulfoxide reductase; [KOG1635] Peptide methionine sulfoxide reductase99.560.6438
25 Mapoly0083s0026 [GO:0008234] cysteine-type peptidase activity; [PF00396] Granulin; [PF08246] Cathepsin propeptide inhibitor domain (I29); [PF00112] Papain family cysteine protease; [KOG1543] Cysteine proteinase Cathepsin L; [PTHR12411] CYSTEINE PROTEASE FAMILY C1-RELATED; [GO:0006508] proteolysis99.880.5631
26 Mapoly0080s0005 [GO:0005524] ATP binding; [GO:0019206] nucleoside kinase activity; [KOG4235] Mitochondrial thymidine kinase 2/deoxyguanosine kinase; [PTHR10513] DEOXYNUCLEOSIDE KINASE; [PF01712] Deoxynucleoside kinase; [GO:0006139] nucleobase-containing compound metabolic process99.980.5137
27 Mapoly0154s0039 [PF01713] Smr domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family101.690.5874
28 Mapoly0007s0090 [PF07466] Protein of unknown function (DUF1517)102.180.6491
29 Mapoly0048s0084 [GO:0055114] oxidation-reduction process; [PTHR30454] 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE; [1.17.7.1] (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase.; [K03526] (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]; [PF04551] GcpE protein; [GO:0016114] terpenoid biosynthetic process; [GO:0046429] 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity107.930.6392
30 Mapoly0188s0012 [GO:0005506] iron ion binding; [PF00301] Rubredoxin109.400.6519
31 Mapoly0030s0051 [GO:0016020] membrane; [PF01758] Sodium Bile acid symporter family; [GO:0008508] bile acid:sodium symporter activity; [GO:0006814] sodium ion transport; [K03453] bile acid:Na+ symporter, BASS family; [KOG2718] Na+-bile acid cotransporter; [PTHR10361] SODIUM-BILE ACID COTRANSPORTER110.650.6310
32 Mapoly0059s0064 [PF04187] Protein of unknown function, DUF399; [PF11891] Domain of unknown function (DUF3411); [PTHR31620] FAMILY NOT NAMED110.960.6401
33 Mapoly0024s0088 [PTHR32429] FAMILY NOT NAMED126.980.6396
34 Mapoly0090s0063 [GO:0005840] ribosome; [PF01165] Ribosomal protein S21; [PTHR21109:SF0] SUBFAMILY NOT NAMED; [PTHR21109] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation132.000.6421
35 Mapoly0072s0008 -132.040.6418
36 Mapoly0065s0008 [PTHR11662] SODIUM-DEPENDENT PHOSPHATE TRANSPORTERS; [GO:0016021] integral to membrane; [KOG2532] Permease of the major facilitator superfamily; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily132.420.5648
37 Mapoly0001s0436 [2.6.1.44] Alanine--glyoxylate transaminase.; [K00830] alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]; [GO:0008152] metabolic process; [2.6.1.45] Serine--glyoxylate transaminase.; [PTHR21152] AMINOTRANSFERASE CLASS V; [2.6.1.51] Serine--pyruvate transaminase.; [KOG2862] Alanine-glyoxylate aminotransferase AGT1; [PF00266] Aminotransferase class-V137.380.6342
38 Mapoly0036s0074 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase138.690.6110
39 Mapoly0091s0018 [KOG2469] IMP-GMP specific 5'-nucleotidase; [PTHR12103:SF15] 5' NUCLEOTIDASE FAMILY PROTEIN; [PTHR12103] CYTOSOLIC PURINE 5-NUCLEOTIDASE-RELATED; [PF05761] 5' nucleotidase family140.180.6160
40 Mapoly0013s0084 [PF02225] PA domain; [GO:0004252] serine-type endopeptidase activity; [PF00082] Subtilase family; [PF05922] Peptidase inhibitor I9; [GO:0006508] proteolysis; [PTHR10795] PROPROTEIN CONVERTASE SUBTILISIN/KEXIN141.420.6310
41 Mapoly0020s0152 [PTHR17130] MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25; [PF13414] TPR repeat142.970.6245
42 Mapoly0111s0017 -147.680.6337
43 Mapoly0133s0008 [KOG0610] Putative serine/threonine protein kinase; [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [K08282] non-specific serine/threonine protein kinase [EC:2.7.11.1]; [GO:0004672] protein kinase activity; [GO:0004871] signal transducer activity; [PF13426] PAS domain; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0007165] signal transduction; [GO:0006468] protein phosphorylation; [PTHR24351] RIBOSOMAL PROTEIN S6 KINASE148.490.6094
44 Mapoly0042s0028 [KOG4172] Predicted E3 ubiquitin ligase; [PTHR10044] INHIBITOR OF APOPTOSIS; [PF13920] Zinc finger, C3HC4 type (RING finger)149.790.5764
45 Mapoly0032s0114 -153.280.6265
46 Mapoly0048s0103 [PTHR22893] NADH OXIDOREDUCTASE-RELATED; [PTHR22893:SF14] N-ETHYLMALEIMIDE REDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [GO:0010181] FMN binding; [PF00724] NADH:flavin oxidoreductase / NADH oxidase family; [KOG0134] NADH:flavin oxidoreductase/12-oxophytodienoate reductase154.400.6120
47 Mapoly0065s0038 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin157.460.5385
48 Mapoly0156s0007 [PF00072] Response regulator receiver domain; [PF00249] Myb-like DNA-binding domain; [PTHR31312] FAMILY NOT NAMED; [GO:0000160] phosphorelay signal transduction system; [GO:0003682] chromatin binding158.320.6192
49 Mapoly0101s0039 [PTHR11804] PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED160.410.6339
50 Mapoly0139s0019 [PTHR23359] NUCLEOTIDE KINASE; [GO:0005524] ATP binding; [K00939] adenylate kinase [EC:2.7.4.3]; [GO:0019205] nucleobase-containing compound kinase activity; [KOG3078] Adenylate kinase; [PF09353] Domain of unknown function (DUF1995); [GO:0006139] nucleobase-containing compound metabolic process; [PF00406] Adenylate kinase; [2.7.4.3] Adenylate kinase.161.270.6312
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