Guide Gene

Gene ID
Mapoly0058s0036
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG0776] Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase; [PTHR12001] GERANYLGERANYL PYROPHOSPHATE SYNTHASE; [2.5.1.84] All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific).; [GO:0008299] isoprenoid biosynthetic process; [PF00348] Polyprenyl synthetase; [2.5.1.85] All-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific).; [PTHR12001:SF18] SOLANESYL DIPHOSPHATE SYNTHASE; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [K05356] all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]; [GO:0015979] photosynthesis

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0058s0036 [KOG0776] Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase; [PTHR12001] GERANYLGERANYL PYROPHOSPHATE SYNTHASE; [2.5.1.84] All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific).; [GO:0008299] isoprenoid biosynthetic process; [PF00348] Polyprenyl synthetase; [2.5.1.85] All-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific).; [PTHR12001:SF18] SOLANESYL DIPHOSPHATE SYNTHASE; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [K05356] all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]; [GO:0015979] photosynthesis 0.00 1.0000
1 Mapoly0040s0104 [GO:0009058] biosynthetic process; [KOG1459] Squalene synthetase; [K02291] phytoene synthase [EC:2.5.1.32]; [2.5.1.32] 15-cis-phytoene synthase.; [GO:0016740] transferase activity; [PTHR31480] FAMILY NOT NAMED; [PF00494] Squalene/phytoene synthase1.000.7737
2 Mapoly0065s0038 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin7.070.7395
3 Mapoly0125s0011 [GO:0008168] methyltransferase activity; [PF03492] SAM dependent carboxyl methyltransferase; [PTHR31009] S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN8.720.7658
4 Mapoly0008s0093 [K04773] protease IV [EC:3.4.21.-]; [GO:0008233] peptidase activity; [3.4.21.-] Serine endopeptidases.; [PF01343] Peptidase family S49; [GO:0006508] proteolysis12.690.7425
5 Mapoly0105s0038 [3.4.24.-] Metalloendopeptidases.; [GO:0004222] metalloendopeptidase activity; [GO:0005524] ATP binding; [K03798] cell division protease FtsH [EC:3.4.24.-]; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis17.150.7649
6 Mapoly0003s0123 [GO:0005524] ATP binding; [PTHR19211:SF26] SUBFAMILY NOT NAMED; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [KOG0927] Predicted transporter (ABC superfamily); [PF12848] ABC transporter; [PF00005] ABC transporter18.170.7376
7 Mapoly0037s0097 [PF08547] Complex I intermediate-associated protein 30 (CIA30); [PF13460] NADH(P)-binding; [KOG1203] Predicted dehydrogenase; [PTHR13194:SF7] COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30; [PTHR13194] COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 3020.490.6847
8 Mapoly0011s0067 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN22.980.7416
9 Mapoly0015s0204 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process23.640.6754
10 Mapoly0002s0095 [PF07719] Tetratricopeptide repeat; [PTHR21262] GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE; [PF13328] HD domain; [PF04607] Region found in RelA / SpoT proteins; [KOG1157] Predicted guanosine polyphosphate pyrophosphohydrolase/synthase; [GO:0015969] guanosine tetraphosphate metabolic process; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding28.530.6840
11 Mapoly0029s0018 [GO:0055114] oxidation-reduction process; [GO:0030091] protein repair; [PTHR10173] METHIONINE SULFOXIDE REDUCTASE; [1.8.4.11] Peptide-methionine (S)-S-oxide reductase.; [GO:0006979] response to oxidative stress; [GO:0008113] peptide-methionine (S)-S-oxide reductase activity; [GO:0016671] oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; [K07304] peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]; [PF01625] Peptide methionine sulfoxide reductase; [KOG1635] Peptide methionine sulfoxide reductase29.900.7454
12 Mapoly0023s0024 [PF02672] CP12 domain33.820.7580
13 Mapoly0020s0161 [1.14.19.-] With oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water.; [PTHR32100] FAMILY NOT NAMED; [PF00487] Fatty acid desaturase; [K10255] omega-6 fatty acid desaturase (delta-12 desaturase) [EC:1.14.19.-]; [GO:0006629] lipid metabolic process35.500.7050
14 Mapoly0045s0082 [KOG0698] Serine/threonine protein phosphatase; [PTHR13832] PROTEIN PHOSPHATASE 2C; [PF00481] Protein phosphatase 2C; [GO:0003824] catalytic activity36.440.7175
15 Mapoly0019s0024 [GO:0005515] protein binding; [PF13417] Glutathione S-transferase, N-terminal domain; [KOG0406] Glutathione S-transferase; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING; [PF13410] Glutathione S-transferase, C-terminal domain36.630.7050
16 Mapoly0045s0081 [GO:0003723] RNA binding; [PTHR23270] PROGRAMMED CELL DEATH PROTEIN 11 (PRE-RRNA PROCESSING PROTEIN RRP5); [PF00575] S1 RNA binding domain39.620.7459
17 Mapoly0088s0023 [PF10184] Uncharacterized conserved protein (DUF2358); [PF04832] SOUL heme-binding protein; [PTHR11220:SF1] HEME-BINDING PROTEIN-RELATED; [PTHR11220] HEME-BINDING PROTEIN-RELATED40.500.6800
18 Mapoly0069s0007 [PF02341] RbcX protein42.040.6205
19 Mapoly0134s0032 [KOG1234] ABC (ATP binding cassette) 1 protein; [PTHR10566:SF10] ABC1 FAMILY PROTEIN KINASE; [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [K08869] aarF domain-containing kinase42.430.6739
20 Mapoly0007s0213 [PF04539] Sigma-70 region 3; [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [GO:0003700] sequence-specific DNA binding transcription factor activity; [K03093] RNA polymerase sigma factor; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity42.570.5914
21 Mapoly0036s0074 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase44.470.7016
22 Mapoly0032s0114 -46.960.7397
23 Mapoly0004s0276 -50.830.7077
24 Mapoly0014s0057 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily51.580.7290
25 Mapoly0040s0124 [PF01680] SOR/SNZ family; [4.-.-.-] Lyases.; [K06215] pyridoxine biosynthesis protein [EC:4.-.-.-]; [PTHR31829:SF0] SUBFAMILY NOT NAMED; [PTHR31829] FAMILY NOT NAMED; [KOG1606] Stationary phase-induced protein, SOR/SNZ family; [GO:0042823] pyridoxal phosphate biosynthetic process54.620.5893
26 Mapoly0051s0030 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0758] Mitochondrial carnitine-acylcarnitine carrier protein; [K03454] mitochondrial carrier protein, MC family60.790.6948
27 Mapoly0082s0009 [PF10184] Uncharacterized conserved protein (DUF2358); [PTHR22750] G-PROTEIN COUPLED RECEPTOR; [KOG4457] Uncharacterized conserved protein61.190.6418
28 Mapoly0121s0039 -62.210.6279
29 Mapoly0002s0250 [PTHR19288] 4-NITROPHENYLPHOSPHATASE-RELATED; [KOG2882] p-Nitrophenyl phosphatase; [PF13344] Haloacid dehalogenase-like hydrolase; [PF13242] HAD-hyrolase-like62.640.7374
30 Mapoly0014s0177 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN63.260.6722
31 Mapoly0007s0090 [PF07466] Protein of unknown function (DUF1517)68.520.7190
32 Mapoly0015s0044 [PTHR10996:SF22] HYDROXYPYRUVATE REDUCTASE; [GO:0055114] oxidation-reduction process; [KOG0069] Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily); [PTHR10996] 2-HYDROXYACID DEHYDROGENASE-RELATED; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [GO:0008152] metabolic process; [GO:0051287] NAD binding; [PF02826] D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; [PF00389] D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain69.630.7310
33 Mapoly0027s0158 [PF11371] Protein of unknown function (DUF3172)69.820.6385
34 Mapoly0037s0086 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [PF03171] 2OG-Fe(II) oxygenase superfamily70.480.6615
35 Mapoly0020s0152 [PTHR17130] MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25; [PF13414] TPR repeat71.130.7072
36 Mapoly0094s0072 [KOG0645] WD40 repeat protein; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat71.440.5824
37 Mapoly0002s0218 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis73.970.6884
38 Mapoly0129s0051 [GO:0050660] flavin adenine dinucleotide binding; [K00384] thioredoxin reductase (NADPH) [EC:1.8.1.9]; [PTHR22912] DISULFIDE OXIDOREDUCTASE; [GO:0055114] oxidation-reduction process; [GO:0045454] cell redox homeostasis; [PF00070] Pyridine nucleotide-disulphide oxidoreductase; [GO:0016491] oxidoreductase activity; [PF00085] Thioredoxin; [1.8.1.9] Thioredoxin-disulfide reductase.; [KOG0404] Thioredoxin reductase; [PF07992] Pyridine nucleotide-disulphide oxidoreductase74.300.6315
39 Mapoly0054s0006 -84.740.5872
40 Mapoly0031s0147 -87.430.5929
41 Mapoly0169s0024 [3.4.24.-] Metalloendopeptidases.; [GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [K03798] cell division protease FtsH [EC:3.4.24.-]; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis88.320.6152
42 Mapoly0066s0102 [PTHR12286:SF3] gb def: hypothetical protein [encephalitozoon cuniculi]; [GO:0055114] oxidation-reduction process; [PF03435] Saccharopine dehydrogenase; [GO:0016491] oxidoreductase activity; [PTHR12286] UNCHARACTERIZED88.620.6502
43 Mapoly0073s0080 [GO:0016020] membrane; [GO:0055114] oxidation-reduction process; [PF11909] NADH-quinone oxidoreductase cyanobacterial subunit N; [GO:0016655] oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor91.780.7103
44 Mapoly0013s0111 [KOG1203] Predicted dehydrogenase; [PTHR14194] NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED; [PF05368] NmrA-like family92.750.7126
45 Mapoly0062s0041 [GO:0055114] oxidation-reduction process; [PF00175] Oxidoreductase NAD-binding domain; [PTHR19384] FLAVODOXIN-RELATED; [GO:0016491] oxidoreductase activity; [PF00970] Oxidoreductase FAD-binding domain; [1.18.1.2] Ferredoxin--NADP(+) reductase.; [K02641] ferredoxin--NADP+ reductase [EC:1.18.1.2]96.750.6971
46 Mapoly0041s0075 [GO:0005506] iron ion binding; [PTHR17130] MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25; [PF00301] Rubredoxin97.470.5758
47 Mapoly0078s0054 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [PTHR24282] FAMILY NOT NAMED; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PF00067] Cytochrome P45098.130.6911
48 Mapoly0058s0048 [KOG1656] Protein involved in glucose derepression and pre-vacuolar endosome protein sorting; [PTHR31088] FAMILY NOT NAMED; [PF04012] PspA/IM30 family; [K03969] phage shock protein A99.620.6990
49 Mapoly0022s0049 [PF08547] Complex I intermediate-associated protein 30 (CIA30); [PF13460] NADH(P)-binding; [KOG1203] Predicted dehydrogenase; [PTHR10366] NAD DEPENDENT EPIMERASE/DEHYDRATASE102.220.6961
50 Mapoly0005s0210 [GO:0042602] riboflavin reductase (NADPH) activity; [GO:0055114] oxidation-reduction process; [PF00258] Flavodoxin; [GO:0016491] oxidoreductase activity; [PF01613] Flavin reductase like domain; [PTHR32145] FAMILY NOT NAMED; [GO:0010181] FMN binding102.450.6300
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