Guide Gene

Gene ID
Mapoly0007s0213
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF04539] Sigma-70 region 3; [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [GO:0003700] sequence-specific DNA binding transcription factor activity; [K03093] RNA polymerase sigma factor; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0007s0213 [PF04539] Sigma-70 region 3; [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [GO:0003700] sequence-specific DNA binding transcription factor activity; [K03093] RNA polymerase sigma factor; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity 0.00 1.0000
1 Mapoly0065s0038 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin4.470.6496
2 Mapoly0070s0031 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin5.480.6345
3 Mapoly0039s0031 [PF13855] Leucine rich repeat; [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF08263] Leucine rich repeat N-terminal domain; [PF00069] Protein kinase domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE6.480.6229
4 Mapoly0089s0038 [PTHR18959] CALPONIN/TRANSGELIN; [PF01476] LysM domain8.000.6186
5 Mapoly0069s0007 [PF02341] RbcX protein9.170.6307
6 Mapoly0161s0027 [KOG4824] Apolipoprotein D/Lipocalin; [PTHR10612:SF7] APOLIPOPROTEIN D-RELATED; [K03098] outer membrane lipoprotein Blc; [PTHR10612] APOLIPOPROTEIN D; [PF08212] Lipocalin-like domain10.580.6480
7 Mapoly0092s0015 [K09480] digalactosyldiacylglycerol synthase [EC:2.4.1.241]; [PF13692] Glycosyl transferases group 1; [PTHR12526] GLYCOSYLTRANSFERASE; [2.4.1.241] Digalactosyldiacylglycerol synthase.11.620.6077
8 Mapoly0082s0009 [PF10184] Uncharacterized conserved protein (DUF2358); [PTHR22750] G-PROTEIN COUPLED RECEPTOR; [KOG4457] Uncharacterized conserved protein12.120.6427
9 Mapoly0062s0032 -14.390.5506
10 Mapoly0169s0024 [3.4.24.-] Metalloendopeptidases.; [GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [K03798] cell division protease FtsH [EC:3.4.24.-]; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis14.420.6352
11 Mapoly0186s0017 [PF03109] ABC1 family; [PTHR10566] CHAPERONE-ACTIVITY OF BC1 COMPLEX (CABC1)-RELATED; [KOG1235] Predicted unusual protein kinase16.250.5960
12 Mapoly0031s0108 [PF00056] lactate/malate dehydrogenase, NAD binding domain; [GO:0055114] oxidation-reduction process; [KOG1496] Malate dehydrogenase; [PTHR23382] MALATE DEHYDROGENASE; [PF02866] lactate/malate dehydrogenase, alpha/beta C-terminal domain; [GO:0016491] oxidoreductase activity; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PTHR23382:SF0] SUBFAMILY NOT NAMED; [GO:0006108] malate metabolic process; [GO:0016615] malate dehydrogenase activity22.450.5501
13 Mapoly0071s0065 [PF04134] Protein of unknown function, DUF39323.240.5996
14 Mapoly0115s0058 -24.720.5794
15 Mapoly0040s0124 [PF01680] SOR/SNZ family; [4.-.-.-] Lyases.; [K06215] pyridoxine biosynthesis protein [EC:4.-.-.-]; [PTHR31829:SF0] SUBFAMILY NOT NAMED; [PTHR31829] FAMILY NOT NAMED; [KOG1606] Stationary phase-induced protein, SOR/SNZ family; [GO:0042823] pyridoxal phosphate biosynthetic process29.290.5442
16 Mapoly1717s0001 [PTHR32227] FAMILY NOT NAMED; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF01453] D-mannose binding lectin; [PF00332] Glycosyl hydrolases family 1730.630.5774
17 Mapoly0076s0055 [GO:0016020] membrane; [PF03254] Xyloglucan fucosyltransferase; [GO:0042546] cell wall biogenesis; [GO:0008107] galactoside 2-alpha-L-fucosyltransferase activity; [PTHR31889] FAMILY NOT NAMED34.280.5477
18 Mapoly0127s0020 [PTHR11614] PHOSPHOLIPASE-RELATED; [KOG1455] Lysophospholipase; [PF12697] Alpha/beta hydrolase family34.790.5550
19 Mapoly0106s0006 [PTHR18901] 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2; [PF13419] Haloacid dehalogenase-like hydrolase36.740.5125
20 Mapoly0094s0025 [GO:0004871] signal transducer activity; [PF13188] PAS domain; [GO:0007165] signal transduction37.150.5070
21 Mapoly0123s0013 [PF02450] Lecithin:cholesterol acyltransferase; [KOG2369] Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase; [PTHR11440] LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED; [GO:0006629] lipid metabolic process; [GO:0008374] O-acyltransferase activity38.340.5143
22 Mapoly0121s0039 -41.570.5744
23 Mapoly0058s0036 [KOG0776] Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase; [PTHR12001] GERANYLGERANYL PYROPHOSPHATE SYNTHASE; [2.5.1.84] All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific).; [GO:0008299] isoprenoid biosynthetic process; [PF00348] Polyprenyl synthetase; [2.5.1.85] All-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific).; [PTHR12001:SF18] SOLANESYL DIPHOSPHATE SYNTHASE; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [K05356] all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]; [GO:0015979] photosynthesis42.570.5914
24 Mapoly0005s0170 [GO:0016020] membrane; [PF01554] MatE; [GO:0015238] drug transmembrane transporter activity; [GO:0015297] antiporter activity; [GO:0055085] transmembrane transport; [PTHR11206] MULTIDRUG RESISTANCE PROTEIN; [KOG1347] Uncharacterized membrane protein, predicted efflux pump; [GO:0006855] drug transmembrane transport42.850.5641
25 Mapoly0135s0018 [PTHR11662] SODIUM-DEPENDENT PHOSPHATE TRANSPORTERS; [GO:0016021] integral to membrane; [KOG2532] Permease of the major facilitator superfamily; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily45.600.5309
26 Mapoly0056s0063 [PF04832] SOUL heme-binding protein; [PTHR11220] HEME-BINDING PROTEIN-RELATED45.920.5596
27 Mapoly0009s0004 [PTHR32227] FAMILY NOT NAMED; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF01453] D-mannose binding lectin; [PF00332] Glycosyl hydrolases family 1746.960.4915
28 Mapoly0005s0071 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PTHR23091] N-TERMINAL ACETYLTRANSFERASE51.380.5590
29 Mapoly0063s0029 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0000160] phosphorelay signal transduction system; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF05231] MASE1; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity58.740.5044
30 Mapoly0080s0086 [PF00264] Common central domain of tyrosinase; [PF12142] Polyphenol oxidase middle domain; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity59.250.5432
31 Mapoly0246s0004 [GO:0055114] oxidation-reduction process; [PTHR31155] ACYL-(ACYL-CARRIER-PROTEIN) DESATURASE-RELATED; [GO:0006631] fatty acid metabolic process; [1.14.19.2] Acyl-[acyl-carrier-protein] desaturase.; [PF03405] Fatty acid desaturase; [K03921] acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2]; [GO:0045300] acyl-[acyl-carrier-protein] desaturase activity70.740.5239
32 Mapoly0080s0026 [KOG0005] Ubiquitin-like protein; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN71.200.4352
33 Mapoly0070s0066 [GO:0009058] biosynthetic process; [PTHR10362] HISTIDINE AMMONIA-LYASE; [GO:0016841] ammonia-lyase activity; [PF00221] Aromatic amino acid lyase73.080.4930
34 Mapoly0123s0039 [PTHR31549:SF0] SUBFAMILY NOT NAMED; [PTHR31549] FAMILY NOT NAMED; [PF03140] Plant protein of unknown function73.270.4667
35 Mapoly0037s0097 [PF08547] Complex I intermediate-associated protein 30 (CIA30); [PF13460] NADH(P)-binding; [KOG1203] Predicted dehydrogenase; [PTHR13194:SF7] COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 30; [PTHR13194] COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 3074.830.5155
36 Mapoly0042s0065 [PF11360] Protein of unknown function (DUF3110)77.150.5343
37 Mapoly0040s0052 [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [PTHR22753:SF1] SUBFAMILY NOT NAMED; [PTHR22753] FAMILY NOT NAMED; [PF03982] Diacylglycerol acyltransferase; [PF12697] Alpha/beta hydrolase family80.590.5758
38 Mapoly0003s0007 [PTHR31446] FAMILY NOT NAMED; [PF02681] Divergent PAP2 family84.680.5385
39 Mapoly0105s0016 [GO:0005524] ATP binding; [KOG1051] Chaperone HSP104 and related ATP-dependent Clp proteases; [PF07724] AAA domain (Cdc48 subfamily); [K03695] ATP-dependent Clp protease ATP-binding subunit ClpB; [PF02861] Clp amino terminal domain; [PF10431] C-terminal, D2-small domain, of ClpB protein; [PTHR11638] ATP-DEPENDENT CLP PROTEASE; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0019538] protein metabolic process85.200.5698
40 Mapoly0044s0023 [GO:0016161] beta-amylase activity; [GO:0000272] polysaccharide catabolic process; [PTHR31352] FAMILY NOT NAMED; [PF01373] Glycosyl hydrolase family 1486.950.4834
41 Mapoly0003s0253 [PTHR26312:SF53] SUBFAMILY NOT NAMED; [PTHR26312] FAMILY NOT NAMED91.420.5581
42 Mapoly0028s0006 -93.270.4809
43 Mapoly0004s0029 [GO:0016567] protein ubiquitination; [GO:0004842] ubiquitin-protein ligase activity; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING; [PF04564] U-box domain94.710.5174
44 Mapoly0049s0007 [KOG0039] Ferric reductase, NADH/NADPH oxidase and related proteins; [PF08022] FAD-binding domain; [GO:0055114] oxidation-reduction process; [PTHR11972] NADPH OXIDASE; [PF01794] Ferric reductase like transmembrane component; [GO:0016491] oxidoreductase activity; [PTHR11972:SF5] RESPIRATORY BURST OXIDASE; [PF08030] Ferric reductase NAD binding domain99.020.4808
45 Mapoly0015s0204 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process101.920.5050
46 Mapoly0169s0028 [KOG1256] Long-chain acyl-CoA synthetases (AMP-forming); [K01897] long-chain acyl-CoA synthetase [EC:6.2.1.3]; [PF00501] AMP-binding enzyme; [6.2.1.3] Long-chain-fatty-acid--CoA ligase.; [GO:0008152] metabolic process; [PTHR24096:SF51] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [PTHR24096] FAMILY NOT NAMED103.690.4887
47 Mapoly0029s0147 [PTHR26312:SF53] SUBFAMILY NOT NAMED; [PTHR26312] FAMILY NOT NAMED104.630.4872
48 Mapoly0027s0158 [PF11371] Protein of unknown function (DUF3172)111.810.5205
49 Mapoly0028s0146 [KOG1603] Copper chaperone; [GO:0030001] metal ion transport; [PTHR22814] COPPER TRANSPORT PROTEIN ATOX1-RELATED; [PF00403] Heavy-metal-associated domain; [GO:0046872] metal ion binding114.300.3820
50 Mapoly0009s0122 [K00036] glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]; [GO:0055114] oxidation-reduction process; [PF02781] Glucose-6-phosphate dehydrogenase, C-terminal domain; [PF00479] Glucose-6-phosphate dehydrogenase, NAD binding domain; [GO:0006006] glucose metabolic process; [1.1.1.49] Glucose-6-phosphate dehydrogenase.; [GO:0004345] glucose-6-phosphate dehydrogenase activity; [GO:0050661] NADP binding; [KOG0563] Glucose-6-phosphate 1-dehydrogenase; [PTHR23429] GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE (G6PD)115.640.5129
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