Guide Gene

Gene ID
Mapoly0047s0079
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR31038] FAMILY NOT NAMED; [PF11891] Domain of unknown function (DUF3411)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0047s0079 [PTHR31038] FAMILY NOT NAMED; [PF11891] Domain of unknown function (DUF3411) 0.00 1.0000
1 Mapoly0039s0078 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family4.360.8679
2 Mapoly0009s0187 [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PF00140] Sigma-70 factor, region 1.2; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity6.000.8375
3 Mapoly0147s0036 -7.140.8646
4 Mapoly0002s0047 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED; [PTHR13068:SF6] gb def: agcp9491 [anopheles gambiae str. pest]8.060.8352
5 Mapoly0082s0035 [GO:0016020] membrane; [PF02517] CAAX protease self-immunity; [PTHR10794] ABHYDROLASE DOMAIN-CONTAINING PROTEIN; [K07052] TatD-related deoxyribonuclease8.490.8609
6 Mapoly0136s0019 [GO:0044238] primary metabolic process; [PF02482] Sigma 54 modulation protein / S30EA ribosomal protein8.490.8438
7 Mapoly0002s0241 [K01870] isoleucyl-tRNA synthetase [EC:6.1.1.5]; [GO:0005524] ATP binding; [KOG0433] Isoleucyl-tRNA synthetase; [6.1.1.5] Isoleucine--tRNA ligase.; [GO:0004822] isoleucine-tRNA ligase activity; [PTHR11946:SF9] ISOLEUCYL TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [PF06827] Zinc finger found in FPG and IleRS; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0003824] catalytic activity; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity8.940.8390
8 Mapoly0039s0077 [KOG0331] ATP-dependent RNA helicase; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PF08152] GUCT (NUC152) domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0005634] nucleus; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding9.490.8426
9 Mapoly0003s0135 [GO:0005524] ATP binding; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [PTHR19211:SF7] ABC TRANSPORTER ABCF3, UUP; [KOG0927] Predicted transporter (ABC superfamily); [PF12848] ABC transporter; [PF00005] ABC transporter11.140.8660
10 Mapoly0136s0015 [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PF03000] NPH3 family; [PTHR32370] FAMILY NOT NAMED12.000.8342
11 Mapoly0057s0089 [1.14.-.-] Acting on paired donors, with incorporation or reduction of molecular oxygen.; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [K06444] lycopene epsilon cyclase [EC:1.14.-.-]; [GO:0016117] carotenoid biosynthetic process; [PF05834] Lycopene cyclase protein; [PTHR13789] MONOOXYGENASE12.250.8347
12 Mapoly0003s0136 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family13.960.8578
13 Mapoly0031s0111 -16.430.8106
14 Mapoly0214s0004 [PF04539] Sigma-70 region 3; [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PF00140] Sigma-70 factor, region 1.2; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity17.940.8256
15 Mapoly0003s0151 [PTHR31818] FAMILY NOT NAMED; [PF10250] GDP-fucose protein O-fucosyltransferase; [PTHR31818:SF0] SUBFAMILY NOT NAMED18.250.7364
16 Mapoly0005s0278 [PF02033] Ribosome-binding factor A; [K02834] ribosome-binding factor A; [GO:0006364] rRNA processing19.440.8300
17 Mapoly0135s0007 -20.490.8539
18 Mapoly0015s0196 [PTHR11624] DEHYDROGENASE RELATED; [K01662] 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]; [GO:0008661] 1-deoxy-D-xylulose-5-phosphate synthase activity; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [GO:0003824] catalytic activity; [2.2.1.7] 1-deoxy-D-xylulose-5-phosphate synthase.; [PF02780] Transketolase, C-terminal domain; [PF13292] 1-deoxy-D-xylulose-5-phosphate synthase; [GO:0016114] terpenoid biosynthetic process; [KOG0523] Transketolase21.170.8104
19 Mapoly0064s0073 -21.840.7151
20 Mapoly0042s0084 [PTHR32254] FAMILY NOT NAMED; [PF06364] Protein of unknown function (DUF1068)22.630.6791
21 Mapoly0052s0067 [GO:0004222] metalloendopeptidase activity; [GO:0005524] ATP binding; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis22.980.8255
22 Mapoly0002s0312 [PTHR11712] POLYKETIDE SYNTHASE-RELATED; [PF00109] Beta-ketoacyl synthase, N-terminal domain; [PF02801] Beta-ketoacyl synthase, C-terminal domain; [KOG1394] 3-oxoacyl-(acyl-carrier-protein) synthase (I and II)23.240.7967
23 Mapoly0067s0096 [PF06421] GTP-binding protein LepA C-terminus; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [K03596] GTP-binding protein LepA; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2; [KOG0462] Elongation factor-type GTP-binding protein26.720.8446
24 Mapoly0001s0279 [PF13855] Leucine rich repeat; [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE27.550.7600
25 Mapoly0033s0170 [GO:0009058] biosynthetic process; [PF00534] Glycosyl transferases group 1; [PF08323] Starch synthase catalytic domain; [PTHR12526] GLYCOSYLTRANSFERASE29.460.7692
26 Mapoly0044s0037 [PTHR31172] FAMILY NOT NAMED30.980.7311
27 Mapoly0040s0106 -31.190.7246
28 Mapoly0066s0082 -33.170.7415
29 Mapoly0027s0004 [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR10108] METHYLTRANSFERASE; [PF01209] ubiE/COQ5 methyltransferase family; [K06127] ubiquinone biosynthesis methyltransferase [EC:2.1.1.-]; [KOG1540] Ubiquinone biosynthesis methyltransferase COQ533.750.7608
30 Mapoly0245s0001 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [PTHR24290] FAMILY NOT NAMED; [GO:0020037] heme binding; [PF00067] Cytochrome P45035.200.8280
31 Mapoly0155s0008 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [PTHR21654] FAMILY NOT NAMED; [PTHR21654:SF0] SUBFAMILY NOT NAMED; [PF13837] Myb/SANT-like DNA-binding domain36.110.7144
32 Mapoly0055s0018 [GO:0003723] RNA binding; [K03595] GTP-binding protein Era; [PTHR11649:SF3] GTP-BINDING PROTEIN ERA; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding37.110.8339
33 Mapoly0041s0102 [PTHR13253] FAMILY NOT NAMED; [PF00581] Rhodanese-like domain; [KOG1530] Rhodanese-related sulfurtransferase37.520.7861
34 Mapoly0042s0113 [PTHR13253] FAMILY NOT NAMED; [PF00581] Rhodanese-like domain; [KOG1530] Rhodanese-related sulfurtransferase40.470.8204
35 Mapoly0112s0034 [KOG1270] Methyltransferases; [GO:0046406] magnesium protoporphyrin IX methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [2.1.1.11] Magnesium protoporphyrin IX methyltransferase.; [GO:0015995] chlorophyll biosynthetic process; [PF07109] Magnesium-protoporphyrin IX methyltransferase C-terminus; [PTHR10108:SF269] BLL8020 PROTEIN; [K03428] magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]40.990.8350
36 Mapoly0005s0220 [3.6.5.3] Protein-synthesizing GTPase.; [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [KOG0460] Mitochondrial translation elongation factor Tu; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [K02358] elongation factor EF-Tu [EC:3.6.5.3]; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 241.820.8377
37 Mapoly0138s0023 [GO:0042254] ribosome biogenesis; [GO:0005730] nucleolus; [PTHR12221] PESCADILLO - RELATED; [PF00533] BRCA1 C Terminus (BRCT) domain; [PF06732] Pescadillo N-terminus; [KOG2481] Protein required for normal rRNA processing42.600.6460
38 Mapoly0094s0015 [KOG0698] Serine/threonine protein phosphatase; [PTHR13832] PROTEIN PHOSPHATASE 2C; [PTHR13832:SF25] PROTEIN PHOSPHATASE, PLANT; [PF00481] Protein phosphatase 2C; [GO:0003824] catalytic activity43.420.7213
39 Mapoly0336s0001 [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [KOG2289] Rhomboid family proteins; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis; [PTHR22936:SF12] gb def: Similar to membrane protein44.180.8027
40 Mapoly0076s0092 [GO:0005737] cytoplasm; [GO:0055114] oxidation-reduction process; [KOG2711] Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase; [GO:0006072] glycerol-3-phosphate metabolic process; [GO:0005975] carbohydrate metabolic process; [PF07479] NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PF01210] NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; [GO:0046168] glycerol-3-phosphate catabolic process; [PTHR11728] GLYCEROL-3-PHOSPHATE DEHYDROGENASE; [GO:0051287] NAD binding; [GO:0004367] glycerol-3-phosphate dehydrogenase [NAD+] activity; [GO:0009331] glycerol-3-phosphate dehydrogenase complex45.170.7984
41 Mapoly0130s0006 [GO:0005524] ATP binding; [KOG0584] Serine/threonine protein kinase; [PF00069] Protein kinase domain; [PTHR13902:SF21] PROTEIN BICAUDAL D HOMOLOG 2 (BIC-D 2) [SOURCE:UNIPROTKB/SWISS-PROT,ACC:Q8TD16]; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR13902] SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-RELATED46.540.7357
42 Mapoly0086s0032 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02835] peptide chain release factor RF-1; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity46.900.8261
43 Mapoly0004s0037 [PF00226] DnaJ domain; [PTHR24077] FAMILY NOT NAMED48.060.7535
44 Mapoly0016s0090 -51.020.8294
45 Mapoly0005s0206 [1.2.4.1] Pyruvate dehydrogenase (acetyl-transferring).; [PF00676] Dehydrogenase E1 component; [K00161] pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]; [PTHR11516] PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR); [GO:0008152] metabolic process; [KOG0225] Pyruvate dehydrogenase E1, alpha subunit; [GO:0016624] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor51.260.6906
46 Mapoly0138s0005 [PF03881] Fructosamine kinase; [PTHR12149] FAMILY NOT NAMED; [KOG3021] Predicted kinase52.540.7353
47 Mapoly0002s0171 [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED54.410.8288
48 Mapoly0178s0020 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR56.190.7893
49 Mapoly0044s0020 [PTHR31446] FAMILY NOT NAMED; [PF02681] Divergent PAP2 family57.880.7800
50 Mapoly0154s0029 [GO:0016020] membrane; [PF02517] CAAX protease self-immunity; [PTHR10794] ABHYDROLASE DOMAIN-CONTAINING PROTEIN; [K07052] TatD-related deoxyribonuclease58.300.6657
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