Guide Gene
- Gene ID
- Mapoly0138s0023
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0042254] ribosome biogenesis; [GO:0005730] nucleolus; [PTHR12221] PESCADILLO - RELATED; [PF00533] BRCA1 C Terminus (BRCT) domain; [PF06732] Pescadillo N-terminus; [KOG2481] Protein required for normal rRNA processing
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0138s0023 [GO:0042254] ribosome biogenesis; [GO:0005730] nucleolus; [PTHR12221] PESCADILLO - RELATED; [PF00533] BRCA1 C Terminus (BRCT) domain; [PF06732] Pescadillo N-terminus; [KOG2481] Protein required for normal rRNA processing 0.00 1.0000 1 Mapoly0056s0118 [KOG1490] GTP-binding protein CRFG/NOG1 (ODN superfamily); [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [PF06858] Nucleolar GTP-binding protein 1 (NOG1); [PTHR11702:SF23] GTP-BINDING PROTEIN-RELATED; [PF08155] NOGCT (NUC087) domain; [K06943] nucleolar GTP-binding protein; [GO:0005525] GTP binding 1.00 0.7990 2 Mapoly0090s0083 [PF01585] G-patch domain; [GO:0003676] nucleic acid binding; [PTHR23149] G PATCH DOMAIN CONTAINING PROTEIN 6.32 0.6715 3 Mapoly0085s0073 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation 7.94 0.6559 4 Mapoly0130s0040 [GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain 14.39 0.5820 5 Mapoly0049s0103 - 15.30 0.6336 6 Mapoly0102s0019 [GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [PF01434] Peptidase family M41; [KOG0734] AAA+-type ATPase containing the peptidase M41 domain; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis 16.25 0.5607 7 Mapoly0030s0105 [PF14009] Domain of unknown function (DUF4228) 16.97 0.6166 8 Mapoly0027s0004 [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR10108] METHYLTRANSFERASE; [PF01209] ubiE/COQ5 methyltransferase family; [K06127] ubiquinone biosynthesis methyltransferase [EC:2.1.1.-]; [KOG1540] Ubiquinone biosynthesis methyltransferase COQ5 23.15 0.6499 9 Mapoly0063s0074 [PTHR18952] CARBONIC ANHYDRASE; [PF00194] Eukaryotic-type carbonic anhydrase; [KOG0382] Carbonic anhydrase 23.22 0.6412 10 Mapoly0060s0085 [PTHR14110:SF1] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22; [KOG1652] Mitochondrial import inner membrane translocase, subunit TIM17; [PF02466] Tim17/Tim22/Tim23/Pmp24 family; [PTHR14110] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 23.49 0.6442 11 Mapoly0105s0051 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 28.91 0.6217 12 Mapoly0056s0018 [GO:0004222] metalloendopeptidase activity; [GO:0005524] ATP binding; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis 38.26 0.6392 13 Mapoly0183s0020 [PF05562] Cold acclimation protein WCOR413 42.21 0.5966 14 Mapoly0047s0079 [PTHR31038] FAMILY NOT NAMED; [PF11891] Domain of unknown function (DUF3411) 42.60 0.6460 15 Mapoly0059s0024 - 50.20 0.5633 16 Mapoly0009s0096 - 53.56 0.5963 17 Mapoly0046s0046 - 54.55 0.5051 18 Mapoly0168s0016 [PF04068] Possible Fer4-like domain in RNase L inhibitor, RLI; [PF04034] Domain of unknown function (DUF367); [PTHR20426] FAMILY NOT NAMED; [PTHR20426:SF0] UPF0293 PROTEIN C16ORF42; [K09140] pre-rRNA-processing protein TSR3; [KOG3154] Uncharacterized conserved protein 55.24 0.5692 19 Mapoly0001s0103 [GO:0009055] electron carrier activity; [GO:0015035] protein disulfide oxidoreductase activity; [KOG0911] Glutaredoxin-related protein; [GO:0045454] cell redox homeostasis; [PTHR10293] GLUTAREDOXIN-RELATED PROTEIN; [PF00462] Glutaredoxin; [PTHR10293:SF16] GLUTAREDOXIN-RELATED PROTEIN 57.62 0.6238 20 Mapoly0145s0006 [PF00264] Common central domain of tyrosinase; [PF12142] Polyphenol oxidase middle domain; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity; [PF12143] Protein of unknown function (DUF_B2219) 58.80 0.6016 21 Mapoly0094s0015 [KOG0698] Serine/threonine protein phosphatase; [PTHR13832] PROTEIN PHOSPHATASE 2C; [PTHR13832:SF25] PROTEIN PHOSPHATASE, PLANT; [PF00481] Protein phosphatase 2C; [GO:0003824] catalytic activity 61.65 0.5938 22 Mapoly0007s0246 [PTHR14911] FAMILY NOT NAMED; [PF01170] Putative RNA methylase family UPF0020 65.50 0.6010 23 Mapoly0001s0084 [PF13424] Tetratricopeptide repeat; [PF13374] Tetratricopeptide repeat; [KOG1840] Kinesin light chain; [PTHR19959] KINESIN LIGHT CHAIN 65.80 0.6066 24 Mapoly0183s0019 - 65.88 0.5631 25 Mapoly0133s0032 [PTHR15371] TIM23; [PTHR15371:SF1] INNER MITOCHONDRIAL MEMBRANE TRANSLOCASE TIM23; [PF02466] Tim17/Tim22/Tim23/Pmp24 family 68.75 0.5651 26 Mapoly0048s0059 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [KOG1802] RNA helicase nonsense mRNA reducing factor (pNORF1); [PF13086] AAA domain; [PF13087] AAA domain 68.77 0.5477 27 Mapoly0012s0141 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 75.41 0.5443 28 Mapoly0002s0047 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED; [PTHR13068:SF6] gb def: agcp9491 [anopheles gambiae str. pest] 77.14 0.5967 29 Mapoly0008s0120 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 77.61 0.5764 30 Mapoly0009s0162 - 82.85 0.5472 31 Mapoly0058s0022 [PTHR31906] FAMILY NOT NAMED; [PF04755] PAP_fibrillin 83.55 0.5955 32 Mapoly0029s0063 [PTHR20982:SF7] RIBOSOME RECYCLING FACTOR; [PTHR20982] RIBOSOME RECYCLING FACTOR; [KOG4759] Ribosome recycling factor; [PF01765] Ribosome recycling factor; [K02838] ribosome recycling factor; [GO:0006412] translation 86.71 0.5491 33 Mapoly0032s0044 - 89.17 0.5988 34 Mapoly0097s0055 [PF00448] SRP54-type protein, GTPase domain; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [K03110] fused signal recognition particle receptor; [PF02881] SRP54-type protein, helical bundle domain; [GO:0005525] GTP binding; [PTHR11564] GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS 89.24 0.5904 35 Mapoly0193s0021 [PF00190] Cupin; [GO:0045735] nutrient reservoir activity; [PTHR31238] FAMILY NOT NAMED 93.32 0.5655 36 Mapoly0193s0020 [PF00190] Cupin; [GO:0045735] nutrient reservoir activity; [PTHR31238] FAMILY NOT NAMED 101.24 0.5751 37 Mapoly0091s0043 [PF00264] Common central domain of tyrosinase; [PF12142] Polyphenol oxidase middle domain; [GO:0055114] oxidation-reduction process; [PTHR11474] TYROSINASE; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [GO:0004097] catechol oxidase activity; [PF12143] Protein of unknown function (DUF_B2219) 103.37 0.5722 38 Mapoly0074s0047 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR10071] TRANSCRIPTION FACTOR GATA (GATA BINDING FACTOR); [GO:0008270] zinc ion binding; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF00320] GATA zinc finger 105.99 0.5534 39 Mapoly0108s0048 [PF05254] Uncharacterised protein family (UPF0203); [PTHR21329:SF8] SUBFAMILY NOT NAMED; [PTHR21329] PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT Q-RELATED 107.83 0.5223 40 Mapoly0142s0042 [PF01255] Putative undecaprenyl diphosphate synthase; [KOG1602] Cis-prenyltransferase; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR10291] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE 110.41 0.5464 41 Mapoly0003s0133 [K01738] cysteine synthase A [EC:2.5.1.47]; [PF00291] Pyridoxal-phosphate dependent enzyme; [2.5.1.47] Cysteine synthase.; [KOG1481] Cysteine synthase; [PTHR10314] SER/THR DEHYDRATASE, TRP SYNTHASE 114.16 0.5580 42 Mapoly0079s0007 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 117.73 0.5266 43 Mapoly0006s0155 [GO:0003723] RNA binding; [PTHR11078] N UTILIZATION SUBSTANCE PROTEIN B-RELATED; [GO:0006355] regulation of transcription, DNA-dependent; [PF01029] NusB family; [GO:0006353] DNA-dependent transcription, termination 118.32 0.5587 44 Mapoly0142s0043 [GO:0000287] magnesium ion binding; [GO:0016829] lyase activity; [PF03936] Terpene synthase family, metal binding domain; [GO:0010333] terpene synthase activity 120.35 0.5419 45 Mapoly0052s0003 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [PTHR24282] FAMILY NOT NAMED; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PF00067] Cytochrome P450 120.37 0.5060 46 Mapoly0005s0129 [KOG0466] Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase); [PF00009] Elongation factor Tu GTP binding domain; [PF09173] Initiation factor eIF2 gamma, C terminal; [PTHR23115:SF9] EUKARYOTIC TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT (EIF-2- GAMMA); [GO:0003924] GTPase activity; [K03242] translation initiation factor eIF-2 gamma subunit; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2 123.60 0.5324 47 Mapoly0188s0014 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0750] Mitochondrial solute carrier protein 123.85 0.5240 48 Mapoly0004s0230 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PTHR13355] GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE; [PTHR13355:SF2] gb def: acetyltransferase (gnat) family [caenorhabditis elegans] 123.94 0.4870 49 Mapoly0002s0287 [KOG0039] Ferric reductase, NADH/NADPH oxidase and related proteins; [PF08022] FAD-binding domain; [GO:0055114] oxidation-reduction process; [PTHR11972] NADPH OXIDASE; [PF01794] Ferric reductase like transmembrane component; [GO:0016491] oxidoreductase activity; [PTHR11972:SF5] RESPIRATORY BURST OXIDASE; [PF08030] Ferric reductase NAD binding domain 125.50 0.5169 50 Mapoly0059s0039 - 127.53 0.5570