Guide Gene

Gene ID
Mapoly0102s0019
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [PF01434] Peptidase family M41; [KOG0734] AAA+-type ATPase containing the peptidase M41 domain; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0102s0019 [GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [PF01434] Peptidase family M41; [KOG0734] AAA+-type ATPase containing the peptidase M41 domain; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis 0.00 1.0000
1 Mapoly0012s0141 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family1.410.7193
2 Mapoly0056s0118 [KOG1490] GTP-binding protein CRFG/NOG1 (ODN superfamily); [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [PF06858] Nucleolar GTP-binding protein 1 (NOG1); [PTHR11702:SF23] GTP-BINDING PROTEIN-RELATED; [PF08155] NOGCT (NUC087) domain; [K06943] nucleolar GTP-binding protein; [GO:0005525] GTP binding3.460.6645
3 Mapoly0057s0064 [PF06273] Plant specific eukaryotic initiation factor 4B; [PTHR32091] FAMILY NOT NAMED14.730.5628
4 Mapoly0138s0023 [GO:0042254] ribosome biogenesis; [GO:0005730] nucleolus; [PTHR12221] PESCADILLO - RELATED; [PF00533] BRCA1 C Terminus (BRCT) domain; [PF06732] Pescadillo N-terminus; [KOG2481] Protein required for normal rRNA processing16.250.5607
5 Mapoly0056s0018 [GO:0004222] metalloendopeptidase activity; [GO:0005524] ATP binding; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis27.390.6115
6 Mapoly0031s0117 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family28.280.5733
7 Mapoly0042s0041 [GO:0016020] membrane; [KOG0809] SNARE protein TLG2/Syntaxin 16; [GO:0005515] protein binding; [PTHR19957] SYNTAXIN; [PF00804] Syntaxin; [K08489] syntaxin 16; [PF05739] SNARE domain28.280.5555
8 Mapoly0009s0096 -35.070.5697
9 Mapoly0021s0161 [KOG0331] ATP-dependent RNA helicase; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PF08152] GUCT (NUC152) domain; [GO:0005634] nucleus; [PTHR24031:SF136] PREDICTED PROTEIN (FRAGMENT); [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding38.110.5538
10 Mapoly0021s0085 [GO:0055114] oxidation-reduction process; [PF01266] FAD dependent oxidoreductase; [PF01494] FAD binding domain; [GO:0016491] oxidoreductase activity; [PTHR10617] ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE43.590.5750
11 Mapoly0012s0091 -48.280.5566
12 Mapoly0105s0051 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR48.740.5473
13 Mapoly0063s0058 [PF02170] PAZ domain; [PF08699] Domain of unknown function (DUF1785); [PTHR22891] EUKARYOTIC TRANSLATION INITIATION FACTOR 2C; [PF02171] Piwi domain; [GO:0005515] protein binding; [KOG1041] Translation initiation factor 2C (eIF-2C) and related proteins54.770.4504
14 Mapoly0116s0024 -61.720.5443
15 Mapoly0052s0003 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [PTHR24282] FAMILY NOT NAMED; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PF00067] Cytochrome P45064.620.5110
16 Mapoly2831s0001 [PTHR11599:SF10] PROTEASOME SUBUNIT ALPHA TYPE 3; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA65.240.4275
17 Mapoly0154s0029 [GO:0016020] membrane; [PF02517] CAAX protease self-immunity; [PTHR10794] ABHYDROLASE DOMAIN-CONTAINING PROTEIN; [K07052] TatD-related deoxyribonuclease70.480.5177
18 Mapoly0005s0259 [PTHR11014] PEPTIDASE M20 FAMILY MEMBER77.270.5404
19 Mapoly0048s0069 [PF00144] Beta-lactamase; [PTHR22935:SF10] ESTERASE; [PTHR22935] PENICILLIN-BINDING PROTEIN77.720.5215
20 Mapoly0204s0005 [PTHR11935] BETA LACTAMASE DOMAIN; [KOG0813] Glyoxylase; [PF00753] Metallo-beta-lactamase superfamily78.040.4979
21 Mapoly0048s0059 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [KOG1802] RNA helicase nonsense mRNA reducing factor (pNORF1); [PF13086] AAA domain; [PF13087] AAA domain79.520.5052
22 Mapoly0006s0155 [GO:0003723] RNA binding; [PTHR11078] N UTILIZATION SUBSTANCE PROTEIN B-RELATED; [GO:0006355] regulation of transcription, DNA-dependent; [PF01029] NusB family; [GO:0006353] DNA-dependent transcription, termination81.460.5405
23 Mapoly0043s0005 [GO:0055114] oxidation-reduction process; [GO:0018580] nitronate monooxygenase activity; [PTHR32332] FAMILY NOT NAMED; [PF03060] Nitronate monooxygenase84.250.3895
24 Mapoly0138s0031 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain86.080.4819
25 Mapoly0006s0098 [GO:0003723] RNA binding; [KOG1990] Poly(A)-specific exoribonuclease PARN; [PF01985] CRS1 / YhbY (CRM) domain; [PTHR31846] FAMILY NOT NAMED87.260.5258
26 Mapoly0007s0246 [PTHR14911] FAMILY NOT NAMED; [PF01170] Putative RNA methylase family UPF002092.200.5342
27 Mapoly0098s0045 -93.170.4944
28 Mapoly0010s0066 [KOG0620] Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins; [PF03372] Endonuclease/Exonuclease/phosphatase family; [PTHR12121] CARBON CATABOLITE REPRESSOR PROTEIN 495.400.4622
29 Mapoly0130s0040 [GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain97.980.4534
30 Mapoly0002s0153 [K01696] tryptophan synthase beta chain [EC:4.2.1.20]; [4.2.1.20] Tryptophan synthase.; [PF00291] Pyridoxal-phosphate dependent enzyme; [KOG1395] Tryptophan synthase beta chain; [PTHR10314] SER/THR DEHYDRATASE, TRP SYNTHASE109.690.5010
31 Mapoly0025s0094 [PTHR22970] FAMILY NOT NAMED109.740.5144
32 Mapoly0002s0047 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED; [PTHR13068:SF6] gb def: agcp9491 [anopheles gambiae str. pest]111.400.5208
33 Mapoly0016s0197 [GO:0016020] membrane; [PTHR10037] VOLTAGE-GATED CATION CHANNEL (CALCIUM AND SODIUM); [PF00520] Ion transport protein; [GO:0055085] transmembrane transport; [GO:0006811] ion transport; [GO:0005216] ion channel activity112.250.4975
34 Mapoly0094s0070 [GO:0016020] membrane; [PTHR11384] ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER; [GO:0005524] ATP binding; [KOG0060] Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis); [PF06472] ABC transporter transmembrane region 2; [GO:0016887] ATPase activity; [GO:0006810] transport; [PTHR11384:SF3] ATP-BINDING CASSETTE, SUB-FAMILY D, MEMBER 4 (PEROXISOMAL MEMBRANE PROTEIN 69); [PF00005] ABC transporter112.640.5345
35 Mapoly0059s0080 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family118.110.5175
36 Mapoly0097s0056 -120.900.5141
37 Mapoly0079s0007 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family123.560.4908
38 Mapoly0027s0004 [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR10108] METHYLTRANSFERASE; [PF01209] ubiE/COQ5 methyltransferase family; [K06127] ubiquinone biosynthesis methyltransferase [EC:2.1.1.-]; [KOG1540] Ubiquinone biosynthesis methyltransferase COQ5124.660.5066
39 Mapoly0027s0037 -126.860.4651
40 Mapoly0059s0084 [PF04389] Peptidase family M28; [PF02225] PA domain; [KOG2195] Transferrin receptor and related proteins containing the protease-associated (PA) domain; [PTHR10404] N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE; [PF04253] Transferrin receptor-like dimerisation domain126.940.4830
41 Mapoly0057s0031 [K13510] lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [EC:2.3.1.23 2.3.1.67]; [2.3.1.67] 1-alkylglycerophosphocholine O-acetyltransferase.; [PTHR23063:SF1] ACETYLTRANSFERASE-RELATED; [PTHR23063] ACETYLTRANSFERASE-RELATED; [PF01553] Acyltransferase; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [KOG4666] Predicted phosphate acyltransferase, contains PlsC domain; [2.3.1.23] 1-acylglycerophosphocholine O-acyltransferase.129.310.4467
42 Mapoly0025s0095 [GO:0003677] DNA binding; [GO:0003917] DNA topoisomerase type I activity; [PTHR11390:SF22] DNA TOPOISOMERASE I; [PF01751] Toprim domain; [PF13368] Topoisomerase C-terminal repeat; [GO:0006265] DNA topological change; [KOG1956] DNA topoisomerase III alpha; [PF01396] Topoisomerase DNA binding C4 zinc finger; [GO:0005694] chromosome; [GO:0003916] DNA topoisomerase activity; [PTHR11390] PROKARYOTIC DNA TOPOISOMERASE; [PF01131] DNA topoisomerase130.110.5190
43 Mapoly0014s0098 -130.600.4969
44 Mapoly0008s0120 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding131.030.4986
45 Mapoly0047s0079 [PTHR31038] FAMILY NOT NAMED; [PF11891] Domain of unknown function (DUF3411)131.350.5226
46 Mapoly0027s0150 [PF04031] Las1-like; [PTHR15002] UNCHARACTERIZED134.470.4792
47 Mapoly0090s0083 [PF01585] G-patch domain; [GO:0003676] nucleic acid binding; [PTHR23149] G PATCH DOMAIN CONTAINING PROTEIN136.250.4930
48 Mapoly0001s0103 [GO:0009055] electron carrier activity; [GO:0015035] protein disulfide oxidoreductase activity; [KOG0911] Glutaredoxin-related protein; [GO:0045454] cell redox homeostasis; [PTHR10293] GLUTAREDOXIN-RELATED PROTEIN; [PF00462] Glutaredoxin; [PTHR10293:SF16] GLUTAREDOXIN-RELATED PROTEIN136.820.5168
49 Mapoly0002s0241 [K01870] isoleucyl-tRNA synthetase [EC:6.1.1.5]; [GO:0005524] ATP binding; [KOG0433] Isoleucyl-tRNA synthetase; [6.1.1.5] Isoleucine--tRNA ligase.; [GO:0004822] isoleucine-tRNA ligase activity; [PTHR11946:SF9] ISOLEUCYL TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [PF06827] Zinc finger found in FPG and IleRS; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0003824] catalytic activity; [PF00133] tRNA synthetases class I (I, L, M and V); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity140.010.5208
50 Mapoly1920s0001 -142.460.4431
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