Guide Gene

Gene ID
Mapoly0016s0090
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
-

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0016s0090 - 0.00 1.0000
1 Mapoly0003s0135 [GO:0005524] ATP binding; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [PTHR19211:SF7] ABC TRANSPORTER ABCF3, UUP; [KOG0927] Predicted transporter (ABC superfamily); [PF12848] ABC transporter; [PF00005] ABC transporter2.450.9254
2 Mapoly0157s0020 [GO:0015031] protein transport; [GO:0006457] protein folding; [PF05698] Bacterial trigger factor protein (TF) C-terminus; [PF05697] Bacterial trigger factor protein (TF); [PTHR30560] TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE2.450.9276
3 Mapoly0101s0072 [PF02602] Uroporphyrinogen-III synthase HemD; [GO:0033014] tetrapyrrole biosynthetic process; [GO:0004852] uroporphyrinogen-III synthase activity4.470.8917
4 Mapoly0135s0007 -4.900.9157
5 Mapoly0024s0090 [PF00089] Trypsin; [PTHR22939] SERINE PROTEASE FAMILY S1C HTRA-RELATED; [GO:0005515] protein binding; [PF13180] PDZ domain; [KOG1320] Serine protease; [GO:0004252] serine-type endopeptidase activity; [GO:0006508] proteolysis6.160.9255
6 Mapoly0065s0095 [K01698] porphobilinogen synthase [EC:4.2.1.24]; [PTHR11458:SF0] SUBFAMILY NOT NAMED; [PF00490] Delta-aminolevulinic acid dehydratase; [4.2.1.24] Porphobilinogen synthase.; [GO:0046872] metal ion binding; [KOG2794] Delta-aminolevulinic acid dehydratase; [GO:0033014] tetrapyrrole biosynthetic process; [PTHR11458] PORPHOBILINOGEN SYNTHASE; [GO:0004655] porphobilinogen synthase activity9.540.9117
7 Mapoly0006s0110 [PTHR24151] FAMILY NOT NAMED; [PF13857] Ankyrin repeats (many copies)12.000.9204
8 Mapoly0050s0024 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF08241] Methyltransferase domain; [GO:0008152] metabolic process12.960.8989
9 Mapoly0020s0094 -13.040.9045
10 Mapoly0057s0005 [K02355] elongation factor EF-G [EC:3.6.5.3]; [PF14492] Elongation Factor G, domain II; [3.6.5.3] Protein-synthesizing GTPase.; [PF00009] Elongation factor Tu GTP binding domain; [KOG0465] Mitochondrial elongation factor; [PF00679] Elongation factor G C-terminus; [PTHR23115:SF13] TRANSLATION ELONGATION FACTOR G; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [PF03764] Elongation factor G, domain IV; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 213.080.9049
11 Mapoly0034s0091 -15.330.9180
12 Mapoly0067s0096 [PF06421] GTP-binding protein LepA C-terminus; [PF00009] Elongation factor Tu GTP binding domain; [PF00679] Elongation factor G C-terminus; [K03596] GTP-binding protein LepA; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2; [KOG0462] Elongation factor-type GTP-binding protein15.490.8974
13 Mapoly0136s0019 [GO:0044238] primary metabolic process; [PF02482] Sigma 54 modulation protein / S30EA ribosomal protein18.840.8610
14 Mapoly0191s0001 [GO:0003723] RNA binding; [GO:0003746] translation elongation factor activity; [GO:0006414] translational elongation; [GO:0005515] protein binding; [PTHR11741] ELONGATION FACTOR TS; [PTHR11741:SF1] gb def: putative mitochondrial elongation factor ts [schizosaccharomyces pombe]; [PF00575] S1 RNA binding domain; [GO:0005622] intracellular; [PF00627] UBA/TS-N domain; [PF00889] Elongation factor TS; [KOG1071] Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt20.400.8990
15 Mapoly0039s0078 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family20.710.8803
16 Mapoly0007s0262 [GO:0005840] ribosome; [PF01245] Ribosomal protein L19; [KOG1698] Mitochondrial/chloroplast ribosomal protein L19; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR15680] RIBOSOMAL PROTEIN L19; [GO:0006412] translation20.980.9071
17 Mapoly0005s0220 [3.6.5.3] Protein-synthesizing GTPase.; [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [KOG0460] Mitochondrial translation elongation factor Tu; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [K02358] elongation factor EF-Tu [EC:3.6.5.3]; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 222.580.8966
18 Mapoly0039s0077 [KOG0331] ATP-dependent RNA helicase; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PF08152] GUCT (NUC152) domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0005634] nucleus; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding23.520.8544
19 Mapoly0015s0150 -25.690.8782
20 Mapoly0007s0166 [GO:0005840] ribosome; [KOG1753] 40S ribosomal protein S16; [K02996] small subunit ribosomal protein S9; [GO:0003735] structural constituent of ribosome; [PF00380] Ribosomal protein S9/S16; [PTHR21569] RIBOSOMAL PROTEIN S9; [GO:0006412] translation27.930.9033
21 Mapoly0002s0242 -28.140.8912
22 Mapoly0039s0053 [GO:0055114] oxidation-reduction process; [GO:0006779] porphyrin-containing compound biosynthetic process; [K00228] coproporphyrinogen III oxidase [EC:1.3.3.3]; [PF01218] Coproporphyrinogen III oxidase; [PTHR10755] COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL; [1.3.3.3] Coproporphyrinogen oxidase.; [GO:0004109] coproporphyrinogen oxidase activity; [PTHR10755:SF0] COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL; [KOG1518] Coproporphyrinogen III oxidase CPO/HEM1328.140.8954
23 Mapoly0005s0157 -28.340.9039
24 Mapoly0057s0090 [GO:0009523] photosystem II; [GO:0019898] extrinsic to membrane; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis28.840.8862
25 Mapoly0010s0156 [GO:0009523] photosystem II; [GO:0010027] thylakoid membrane organization; [PF11264] Thylakoid formation protein; [GO:0015979] photosynthesis30.590.8905
26 Mapoly0183s0014 [PTHR24012] FAMILY NOT NAMED; [KOG0131] Splicing factor 3b, subunit 4; [GO:0003676] nucleic acid binding; [PTHR24012:SF161] RNA-BINDING PROTEIN, PUTATIVE; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)30.820.8896
27 Mapoly0005s0278 [PF02033] Ribosome-binding factor A; [K02834] ribosome-binding factor A; [GO:0006364] rRNA processing31.890.8404
28 Mapoly0136s0029 [PTHR32183] FAMILY NOT NAMED32.400.8842
29 Mapoly0003s0136 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family32.650.8786
30 Mapoly0009s0187 [GO:0003677] DNA binding; [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0006352] DNA-dependent transcription, initiation; [PF00140] Sigma-70 factor, region 1.2; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF04542] Sigma-70 region 2; [PF04545] Sigma-70, region 4; [GO:0016987] sigma factor activity33.590.8284
31 Mapoly0044s0020 [PTHR31446] FAMILY NOT NAMED; [PF02681] Divergent PAP2 family35.370.8290
32 Mapoly0042s0113 [PTHR13253] FAMILY NOT NAMED; [PF00581] Rhodanese-like domain; [KOG1530] Rhodanese-related sulfurtransferase35.680.8656
33 Mapoly0036s0075 [PF00745] Glutamyl-tRNAGlu reductase, dimerisation domain; [GO:0055114] oxidation-reduction process; [PTHR13812] ORNITHINE CYCLODEAMINASE-RELATED; [GO:0008883] glutamyl-tRNA reductase activity; [1.2.1.70] Glutamyl-tRNA reductase.; [K02492] glutamyl-tRNA reductase [EC:1.2.1.70]; [GO:0050661] NADP binding; [PF05201] Glutamyl-tRNAGlu reductase, N-terminal domain; [GO:0033014] tetrapyrrole biosynthetic process; [PF01488] Shikimate / quinate 5-dehydrogenase36.060.8738
34 Mapoly0038s0038 [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [GO:0006457] protein folding; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [KOG0544] FKBP-type peptidyl-prolyl cis-trans isomerase36.250.8598
35 Mapoly0088s0012 -36.370.8874
36 Mapoly0076s0092 [GO:0005737] cytoplasm; [GO:0055114] oxidation-reduction process; [KOG2711] Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase; [GO:0006072] glycerol-3-phosphate metabolic process; [GO:0005975] carbohydrate metabolic process; [PF07479] NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [PF01210] NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; [GO:0046168] glycerol-3-phosphate catabolic process; [PTHR11728] GLYCEROL-3-PHOSPHATE DEHYDROGENASE; [GO:0051287] NAD binding; [GO:0004367] glycerol-3-phosphate dehydrogenase [NAD+] activity; [GO:0009331] glycerol-3-phosphate dehydrogenase complex37.040.8464
37 Mapoly0005s0034 [GO:0005840] ribosome; [KOG4607] Mitochondrial ribosomal protein L9; [GO:0003735] structural constituent of ribosome; [PF03948] Ribosomal protein L9, C-terminal domain; [PF01281] Ribosomal protein L9, N-terminal domain; [PTHR21368] 50S RIBOSOMAL PROTEIN L9; [GO:0005622] intracellular; [K02939] large subunit ribosomal protein L9; [GO:0006412] translation38.000.8948
38 Mapoly0006s0176 [GO:0005840] ribosome; [PTHR11545:SF2] 50S RIBOSOMAL PROTEIN L13; [GO:0003735] structural constituent of ribosome; [KOG3203] Mitochondrial/chloroplast ribosomal protein L13; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L13; [K02871] large subunit ribosomal protein L1338.340.8981
39 Mapoly0040s0099 [6.6.1.1] Magnesium chelatase.; [GO:0016851] magnesium chelatase activity; [PF01078] Magnesium chelatase, subunit ChlI; [GO:0015995] chlorophyll biosynthetic process; [K03405] magnesium chelatase subunit I [EC:6.6.1.1]; [GO:0015979] photosynthesis39.370.8865
40 Mapoly0086s0032 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02835] peptide chain release factor RF-1; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity39.370.8746
41 Mapoly0002s0231 [PTHR13253] FAMILY NOT NAMED; [PF00581] Rhodanese-like domain; [KOG1530] Rhodanese-related sulfurtransferase39.940.8720
42 Mapoly0002s0171 [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED40.500.8797
43 Mapoly0048s0095 [GO:0016020] membrane; [GO:0005524] ATP binding; [GO:0017038] protein import; [PF07516] SecA Wing and Scaffold domain; [PTHR30612] SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM; [PF07517] SecA DEAD-like domain; [PF01043] SecA preprotein cross-linking domain; [K03070] preprotein translocase subunit SecA40.890.8502
44 Mapoly0134s0004 [PTHR15020] FLAVIN REDUCTASE-RELATED; [PF13460] NADH(P)-binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase44.180.8681
45 Mapoly0112s0034 [KOG1270] Methyltransferases; [GO:0046406] magnesium protoporphyrin IX methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [2.1.1.11] Magnesium protoporphyrin IX methyltransferase.; [GO:0015995] chlorophyll biosynthetic process; [PF07109] Magnesium-protoporphyrin IX methyltransferase C-terminus; [PTHR10108:SF269] BLL8020 PROTEIN; [K03428] magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]44.900.8784
46 Mapoly0001s0161 [GO:0005840] ribosome; [PF00416] Ribosomal protein S13/S18; [GO:0003723] RNA binding; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG3311] Ribosomal protein S18; [PTHR10871] 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18; [GO:0006412] translation46.730.8916
47 Mapoly0001s0151 [GO:0008565] protein transporter activity; [K03116] sec-independent protein translocase protein TatA; [GO:0015031] protein transport; [PF02416] mttA/Hcf106 family48.500.8525
48 Mapoly0050s0098 [GO:0016020] membrane; [PF02325] YGGT family; [K02221] YggT family protein48.740.8853
49 Mapoly0009s0197 [GO:0005524] ATP binding; [PTHR11584:SF316] SIMILAR TO PHOSPHATIDYLETHANOLAMINE METHYLTRANSFERASE PUTATIVE UNCHARACTERIZED; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [KOG0594] Protein kinase PCTAIRE and related kinases; [PTHR11584] SERINE/THREONINE PROTEIN KINASE49.960.8669
50 Mapoly0001s0232 [GO:0005840] ribosome; [KOG1624] Mitochondrial/chloroplast ribosomal protein L4; [GO:0003735] structural constituent of ribosome; [PF00573] Ribosomal protein L4/L1 family; [PTHR10746] 50S RIBOSOMAL PROTEIN L4; [GO:0006412] translation50.750.8775
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