Guide Gene

Gene ID
Mapoly0036s0075
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF00745] Glutamyl-tRNAGlu reductase, dimerisation domain; [GO:0055114] oxidation-reduction process; [PTHR13812] ORNITHINE CYCLODEAMINASE-RELATED; [GO:0008883] glutamyl-tRNA reductase activity; [1.2.1.70] Glutamyl-tRNA reductase.; [K02492] glutamyl-tRNA reductase [EC:1.2.1.70]; [GO:0050661] NADP binding; [PF05201] Glutamyl-tRNAGlu reductase, N-terminal domain; [GO:0033014] tetrapyrrole biosynthetic process; [PF01488] Shikimate / quinate 5-dehydrogenase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0036s0075 [PF00745] Glutamyl-tRNAGlu reductase, dimerisation domain; [GO:0055114] oxidation-reduction process; [PTHR13812] ORNITHINE CYCLODEAMINASE-RELATED; [GO:0008883] glutamyl-tRNA reductase activity; [1.2.1.70] Glutamyl-tRNA reductase.; [K02492] glutamyl-tRNA reductase [EC:1.2.1.70]; [GO:0050661] NADP binding; [PF05201] Glutamyl-tRNAGlu reductase, N-terminal domain; [GO:0033014] tetrapyrrole biosynthetic process; [PF01488] Shikimate / quinate 5-dehydrogenase 0.00 1.0000
1 Mapoly0190s0016 [PTHR11178] IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED; [GO:0005506] iron ion binding; [GO:0051536] iron-sulfur cluster binding; [GO:0016226] iron-sulfur cluster assembly; [PF01106] NifU-like domain2.450.8898
2 Mapoly0191s0001 [GO:0003723] RNA binding; [GO:0003746] translation elongation factor activity; [GO:0006414] translational elongation; [GO:0005515] protein binding; [PTHR11741] ELONGATION FACTOR TS; [PTHR11741:SF1] gb def: putative mitochondrial elongation factor ts [schizosaccharomyces pombe]; [PF00575] S1 RNA binding domain; [GO:0005622] intracellular; [PF00627] UBA/TS-N domain; [PF00889] Elongation factor TS; [KOG1071] Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt3.740.9168
3 Mapoly0199s0017 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [K08912] light-harvesting complex II chlorophyll a/b binding protein 1; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting12.650.8446
4 Mapoly0011s0076 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [K08916] light-harvesting complex II chlorophyll a/b binding protein 5; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting13.420.8901
5 Mapoly0037s0130 [K00507] stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1]; [KOG1600] Fatty acid desaturase; [PTHR11351:SF2] DELTA 9 DESATURASE; [1.14.19.1] Stearoyl-CoA 9-desaturase.; [PF00487] Fatty acid desaturase; [PTHR11351] ACYL-COA DESATURASE; [GO:0006629] lipid metabolic process13.420.8554
6 Mapoly0049s0056 [K08902] photosystem II Psb27 protein; [GO:0010207] photosystem II assembly; [PF13326] Photosystem II Pbs2714.000.9075
7 Mapoly0107s0029 [PTHR31425] FAMILY NOT NAMED; [PF06549] Protein of unknown function (DUF1118)14.900.8941
8 Mapoly0052s0039 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [K08917] light-harvesting complex II chlorophyll a/b binding protein 6; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting15.430.8897
9 Mapoly0075s0054 -16.460.7725
10 Mapoly0010s0196 [PTHR18901] 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2; [KOG2914] Predicted haloacid-halidohydrolase and related hydrolases; [PF13419] Haloacid dehalogenase-like hydrolase19.390.8916
11 Mapoly0010s0156 [GO:0009523] photosystem II; [GO:0010027] thylakoid membrane organization; [PF11264] Thylakoid formation protein; [GO:0015979] photosynthesis19.670.8868
12 Mapoly0005s0220 [3.6.5.3] Protein-synthesizing GTPase.; [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [KOG0460] Mitochondrial translation elongation factor Tu; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [K02358] elongation factor EF-Tu [EC:3.6.5.3]; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 219.800.8868
13 Mapoly0083s0047 [GO:0009523] photosystem II; [GO:0016021] integral to membrane; [GO:0030145] manganese ion binding; [K02723] photosystem II PsbY protein; [PF06298] Photosystem II protein Y (PsbY); [GO:0015979] photosynthesis23.690.8850
14 Mapoly0075s0057 [GO:0009538] photosystem I reaction center; [K02694] photosystem I subunit III; [PF02507] Photosystem I reaction centre subunit III; [GO:0009522] photosystem I; [GO:0015979] photosynthesis24.190.8840
15 Mapoly0091s0019 [GO:0016020] membrane; [PTHR12608:SF3] TRANSMEMBRANE PROTEIN FT27 - RELATED; [PTHR12608] TRANSMEMBRANE PROTEIN HTP-1 RELATED; [KOG2881] Predicted membrane protein; [PF01169] Uncharacterized protein family UPF001624.490.8863
16 Mapoly0082s0040 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [K08907] light-harvesting complex I chlorophyll a/b binding protein 1; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting26.460.8830
17 Mapoly0135s0007 -26.530.8751
18 Mapoly0002s0171 [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED28.140.8775
19 Mapoly0039s0053 [GO:0055114] oxidation-reduction process; [GO:0006779] porphyrin-containing compound biosynthetic process; [K00228] coproporphyrinogen III oxidase [EC:1.3.3.3]; [PF01218] Coproporphyrinogen III oxidase; [PTHR10755] COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL; [1.3.3.3] Coproporphyrinogen oxidase.; [GO:0004109] coproporphyrinogen oxidase activity; [PTHR10755:SF0] COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL; [KOG1518] Coproporphyrinogen III oxidase CPO/HEM1328.460.8812
20 Mapoly0011s0046 [GO:0000287] magnesium ion binding; [GO:0016829] lyase activity; [PF03936] Terpene synthase family, metal binding domain; [GO:0010333] terpene synthase activity29.700.8646
21 Mapoly0139s0019 [PTHR23359] NUCLEOTIDE KINASE; [GO:0005524] ATP binding; [K00939] adenylate kinase [EC:2.7.4.3]; [GO:0019205] nucleobase-containing compound kinase activity; [KOG3078] Adenylate kinase; [PF09353] Domain of unknown function (DUF1995); [GO:0006139] nucleobase-containing compound metabolic process; [PF00406] Adenylate kinase; [2.7.4.3] Adenylate kinase.32.730.8802
22 Mapoly0141s0027 [PTHR31982] FAMILY NOT NAMED; [K02692] photosystem I subunit II; [GO:0009538] photosystem I reaction center; [PF02531] PsaD; [GO:0009522] photosystem I; [GO:0015979] photosynthesis33.480.8772
23 Mapoly0031s0189 [PF10184] Uncharacterized conserved protein (DUF2358)33.820.8722
24 Mapoly0056s0110 [PF00581] Rhodanese-like domain34.770.8711
25 Mapoly0024s0048 [3.1.3.37] Sedoheptulose-bisphosphatase.; [K01100] sedoheptulose-bisphosphatase [EC:3.1.3.37]; [GO:0005975] carbohydrate metabolic process; [GO:0042132] fructose 1,6-bisphosphate 1-phosphatase activity; [PTHR11556] FRUCTOSE-1,6-BISPHOSPHATASE-RELATED; [PTHR11556:SF2] SEDOHEPTULOSE-1,7-BISPHOSPHATASE, CHLOROPLAST; [GO:0042578] phosphoric ester hydrolase activity; [PF00316] Fructose-1-6-bisphosphatase; [KOG1458] Fructose-1,6-bisphosphatase35.330.8845
26 Mapoly0016s0090 -36.060.8738
27 Mapoly0083s0003 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [K08908] light-harvesting complex I chlorophyll a/b binding protein 2; [GO:0009765] photosynthesis, light harvesting38.470.8652
28 Mapoly0066s0082 -38.600.7626
29 Mapoly0038s0054 [GO:0016020] membrane; [K08905] photosystem I subunit V; [PF01241] Photosystem I psaG / psaK; [GO:0015979] photosynthesis; [GO:0009522] photosystem I38.780.8810
30 Mapoly0112s0045 [GO:0004659] prenyltransferase activity; [K02548] 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]; [PTHR13929] 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE; [GO:0016021] integral to membrane; [2.5.1.74] 1,4-dihydroxy-2-naphthoate polyprenyltransferase.; [KOG4581] Predicted membrane protein; [PF01040] UbiA prenyltransferase family39.120.8584
31 Mapoly0116s0042 [PF05479] Photosystem I reaction centre subunit N (PSAN or PSI-N); [GO:0042651] thylakoid membrane; [K02701] photosystem I subunit PsaN; [GO:0005516] calmodulin binding; [GO:0015979] photosynthesis; [GO:0009522] photosystem I41.470.8766
32 Mapoly0002s0242 -41.890.8719
33 Mapoly0080s0075 [PF09366] Protein of unknown function (DUF1997)42.810.8610
34 Mapoly0056s0040 [PF01716] Manganese-stabilising protein / photosystem II polypeptide; [GO:0009523] photosystem II; [GO:0019898] extrinsic to membrane; [K02716] photosystem II oxygen-evolving enhancer protein 1; [GO:0009654] oxygen evolving complex; [GO:0042549] photosystem II stabilization; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis43.270.8665
35 Mapoly0006s0261 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [K08910] light-harvesting complex I chlorophyll a/b binding protein 4; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting44.360.8646
36 Mapoly0104s0016 [GO:0005506] iron ion binding; [PF00042] Globin; [PTHR22924] LEGHEMOGLOBIN-RELATED; [GO:0020037] heme binding45.110.8566
37 Mapoly0154s0018 [PF13460] NADH(P)-binding; [KOG1203] Predicted dehydrogenase; [PTHR14194] NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED45.480.8630
38 Mapoly0034s0131 -46.040.7954
39 Mapoly0130s0033 [GO:0006096] glycolysis; [PF00274] Fructose-bisphosphate aldolase class-I; [PTHR11627] FRUCTOSE-BISPHOSPHATE ALDOLASE; [GO:0004332] fructose-bisphosphate aldolase activity; [KOG1557] Fructose-biphosphate aldolase46.730.8752
40 Mapoly0075s0034 [GO:0009523] photosystem II; [GO:0019898] extrinsic to membrane; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis48.210.8718
41 Mapoly0049s0124 [PF13516] Leucine Rich repeat; [PTHR24106] FAMILY NOT NAMED; [KOG1909] Ran GTPase-activating protein49.990.8174
42 Mapoly0157s0020 [GO:0015031] protein transport; [GO:0006457] protein folding; [PF05698] Bacterial trigger factor protein (TF) C-terminus; [PF05697] Bacterial trigger factor protein (TF); [PTHR30560] TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE50.280.8692
43 Mapoly0030s0118 [PTHR24316] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [KOG1208] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); [PF00106] short chain dehydrogenase; [1.3.1.33] Protochlorophyllide reductase.; [K00218] protochlorophyllide reductase [EC:1.3.1.33]52.310.8562
44 Mapoly0037s0118 [GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain55.140.8150
45 Mapoly0061s0118 [K02693] photosystem I subunit IV; [PF02427] Photosystem I reaction centre subunit IV / PsaE; [GO:0009538] photosystem I reaction center; [GO:0009522] photosystem I; [GO:0015979] photosynthesis55.820.8664
46 Mapoly0006s0050 [KOG1662] Mitochondrial F1F0-ATP synthase, subunit OSCP/ATP5; [PTHR11910:SF1] ATP SYNTHASE DELTA CHAIN; [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [PTHR11910] ATP SYNTHASE DELTA CHAIN; [GO:0015986] ATP synthesis coupled proton transport; [K02113] F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]; [PF00213] ATP synthase delta (OSCP) subunit56.540.8750
47 Mapoly0019s0014 [K00434] L-ascorbate peroxidase [EC:1.11.1.11]; [GO:0055114] oxidation-reduction process; [PF00141] Peroxidase; [GO:0020037] heme binding; [GO:0006979] response to oxidative stress; [GO:0004601] peroxidase activity; [PTHR31356] FAMILY NOT NAMED; [1.11.1.11] L-ascorbate peroxidase.56.710.8738
48 Mapoly0091s0009 [GO:0016020] membrane; [GO:0009523] photosystem II; [PF06596] Photosystem II reaction centre X protein (PsbX); [GO:0015979] photosynthesis57.240.8653
49 Mapoly0104s0018 [GO:0005506] iron ion binding; [PF00042] Globin; [PTHR22924] LEGHEMOGLOBIN-RELATED; [GO:0020037] heme binding57.460.7780
50 Mapoly0199s0013 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting; [K08913] light-harvesting complex II chlorophyll a/b binding protein 257.730.8691
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