Guide Gene
- Gene ID
- Mapoly0030s0118
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PTHR24316] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [KOG1208] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); [PF00106] short chain dehydrogenase; [1.3.1.33] Protochlorophyllide reductase.; [K00218] protochlorophyllide reductase [EC:1.3.1.33]
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0030s0118 [PTHR24316] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [KOG1208] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); [PF00106] short chain dehydrogenase; [1.3.1.33] Protochlorophyllide reductase.; [K00218] protochlorophyllide reductase [EC:1.3.1.33] 0.00 1.0000 1 Mapoly0116s0015 [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PTHR10617] ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE; [K10960] geranylgeranyl reductase [EC:1.3.1.83]; [PF07992] Pyridine nucleotide-disulphide oxidoreductase; [1.3.1.83] Geranylgeranyl diphosphate reductase. 2.83 0.9148 2 Mapoly0039s0053 [GO:0055114] oxidation-reduction process; [GO:0006779] porphyrin-containing compound biosynthetic process; [K00228] coproporphyrinogen III oxidase [EC:1.3.3.3]; [PF01218] Coproporphyrinogen III oxidase; [PTHR10755] COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL; [1.3.3.3] Coproporphyrinogen oxidase.; [GO:0004109] coproporphyrinogen oxidase activity; [PTHR10755:SF0] COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL; [KOG1518] Coproporphyrinogen III oxidase CPO/HEM13 3.00 0.9313 3 Mapoly0040s0099 [6.6.1.1] Magnesium chelatase.; [GO:0016851] magnesium chelatase activity; [PF01078] Magnesium chelatase, subunit ChlI; [GO:0015995] chlorophyll biosynthetic process; [K03405] magnesium chelatase subunit I [EC:6.6.1.1]; [GO:0015979] photosynthesis 5.10 0.9265 4 Mapoly0118s0023 - 5.48 0.9146 5 Mapoly0103s0078 [GO:0006779] porphyrin-containing compound biosynthetic process; [PTHR21091] METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED; [KOG2872] Uroporphyrinogen decarboxylase; [PF01208] Uroporphyrinogen decarboxylase (URO-D); [GO:0004853] uroporphyrinogen decarboxylase activity 6.00 0.9161 6 Mapoly0028s0136 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [PTHR24290] FAMILY NOT NAMED; [GO:0020037] heme binding; [K09837] carotenoid epsilon-ring hydroxylase; [PF00067] Cytochrome P450 7.21 0.8944 7 Mapoly0033s0150 - 8.49 0.9012 8 Mapoly0086s0004 [PF10674] Protein of unknown function (DUF2488) 8.49 0.9138 9 Mapoly0048s0083 [1.17.1.2] 4-hydroxy-3-methylbut-2-enyl diphosphate reductase.; [PTHR31619] FAMILY NOT NAMED; [GO:0051745] 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity; [K03527] 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]; [GO:0019288] isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; [GO:0050992] dimethylallyl diphosphate biosynthetic process; [GO:0046872] metal ion binding; [PF02401] LytB protein 9.54 0.8297 10 Mapoly0015s0060 [GO:0004418] hydroxymethylbilane synthase activity; [PF03900] Porphobilinogen deaminase, C-terminal domain; [2.5.1.61] Hydroxymethylbilane synthase.; [K01749] hydroxymethylbilane synthase [EC:2.5.1.61]; [KOG2892] Porphobilinogen deaminase; [PF01379] Porphobilinogen deaminase, dipyromethane cofactor binding domain; [PTHR11557:SF0] SUBFAMILY NOT NAMED; [GO:0033014] tetrapyrrole biosynthetic process; [PTHR11557] PORPHOBILINOGEN DEAMINASE 9.95 0.8980 11 Mapoly0191s0001 [GO:0003723] RNA binding; [GO:0003746] translation elongation factor activity; [GO:0006414] translational elongation; [GO:0005515] protein binding; [PTHR11741] ELONGATION FACTOR TS; [PTHR11741:SF1] gb def: putative mitochondrial elongation factor ts [schizosaccharomyces pombe]; [PF00575] S1 RNA binding domain; [GO:0005622] intracellular; [PF00627] UBA/TS-N domain; [PF00889] Elongation factor TS; [KOG1071] Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt 10.58 0.9129 12 Mapoly0065s0095 [K01698] porphobilinogen synthase [EC:4.2.1.24]; [PTHR11458:SF0] SUBFAMILY NOT NAMED; [PF00490] Delta-aminolevulinic acid dehydratase; [4.2.1.24] Porphobilinogen synthase.; [GO:0046872] metal ion binding; [KOG2794] Delta-aminolevulinic acid dehydratase; [GO:0033014] tetrapyrrole biosynthetic process; [PTHR11458] PORPHOBILINOGEN SYNTHASE; [GO:0004655] porphobilinogen synthase activity 12.33 0.9059 13 Mapoly0042s0009 [PTHR24012] FAMILY NOT NAMED; [KOG0131] Splicing factor 3b, subunit 4; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14.97 0.8919 14 Mapoly0002s0171 [KOG1267] Mitochondrial transcription termination factor, mTERF; [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED 15.49 0.8947 15 Mapoly0112s0045 [GO:0004659] prenyltransferase activity; [K02548] 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]; [PTHR13929] 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE; [GO:0016021] integral to membrane; [2.5.1.74] 1,4-dihydroxy-2-naphthoate polyprenyltransferase.; [KOG4581] Predicted membrane protein; [PF01040] UbiA prenyltransferase family 16.25 0.8768 16 Mapoly0157s0020 [GO:0015031] protein transport; [GO:0006457] protein folding; [PF05698] Bacterial trigger factor protein (TF) C-terminus; [PF05697] Bacterial trigger factor protein (TF); [PTHR30560] TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 17.61 0.9011 17 Mapoly0048s0095 [GO:0016020] membrane; [GO:0005524] ATP binding; [GO:0017038] protein import; [PF07516] SecA Wing and Scaffold domain; [PTHR30612] SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM; [PF07517] SecA DEAD-like domain; [PF01043] SecA preprotein cross-linking domain; [K03070] preprotein translocase subunit SecA 17.89 0.8682 18 Mapoly0001s0043 - 19.18 0.8583 19 Mapoly0154s0018 [PF13460] NADH(P)-binding; [KOG1203] Predicted dehydrogenase; [PTHR14194] NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED 19.97 0.8791 20 Mapoly0058s0049 [PF13460] NADH(P)-binding; [KOG1203] Predicted dehydrogenase; [PTHR14194] NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED 20.00 0.8731 21 Mapoly0023s0130 [GO:0003723] RNA binding; [PTHR23270] PROGRAMMED CELL DEATH PROTEIN 11 (PRE-RRNA PROCESSING PROTEIN RRP5); [PF00575] S1 RNA binding domain 20.07 0.8693 22 Mapoly0034s0094 [6.6.1.1] Magnesium chelatase.; [PF13519] von Willebrand factor type A domain; [GO:0016851] magnesium chelatase activity; [PF01078] Magnesium chelatase, subunit ChlI; [GO:0015995] chlorophyll biosynthetic process; [K03404] magnesium chelatase subunit D [EC:6.6.1.1]; [GO:0015979] photosynthesis 21.45 0.8760 23 Mapoly0112s0034 [KOG1270] Methyltransferases; [GO:0046406] magnesium protoporphyrin IX methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [2.1.1.11] Magnesium protoporphyrin IX methyltransferase.; [GO:0015995] chlorophyll biosynthetic process; [PF07109] Magnesium-protoporphyrin IX methyltransferase C-terminus; [PTHR10108:SF269] BLL8020 PROTEIN; [K03428] magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11] 23.69 0.8888 24 Mapoly0043s0143 [PF00687] Ribosomal protein L1p/L10e family; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [KOG1569] 50S ribosomal protein L1 28.25 0.8863 25 Mapoly0005s0279 [PTHR13343] CREG1 PROTEIN; [PF13883] Pyridoxamine 5'-phosphate oxidase; [PF10615] Protein of unknown function (DUF2470) 31.02 0.8728 26 Mapoly0027s0106 [PTHR11177] CHITINASE 32.16 0.8579 27 Mapoly0030s0067 [PF00550] Phosphopantetheine attachment site; [PTHR20863] ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED 32.47 0.8672 28 Mapoly0134s0004 [PTHR15020] FLAVIN REDUCTASE-RELATED; [PF13460] NADH(P)-binding; [KOG1502] Flavonol reductase/cinnamoyl-CoA reductase 33.00 0.8672 29 Mapoly0129s0002 [KOG0512] Fetal globin-inducing factor (contains ankyrin repeats); [PTHR24128] FAMILY NOT NAMED; [PF00385] Chromo (CHRromatin Organisation MOdifier) domain; [PF12796] Ankyrin repeats (3 copies); [K12271] signal recognition particle 43 kDa protein 34.47 0.8723 30 Mapoly0001s0431 - 35.41 0.8516 31 Mapoly0008s0189 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [K02988] small subunit ribosomal protein S5; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [KOG0877] 40S ribosomal protein S2/30S ribosomal protein S5; [GO:0006412] translation; [PF03719] Ribosomal protein S5, C-terminal domain 36.54 0.8902 32 Mapoly0065s0007 [PTHR12934] 50S RIBOSOMAL PROTEIN L15; [KOG0846] Mitochondrial/chloroplast ribosomal protein L15/L10; [PF00828] Ribosomal protein L18e/L15; [GO:0003735] structural constituent of ribosome; [PTHR12934:SF2] 50S RIBOSOMAL PROTEIN L15; [GO:0015934] large ribosomal subunit; [GO:0006412] translation; [K02876] large subunit ribosomal protein L15 37.42 0.8855 33 Mapoly0034s0091 - 38.42 0.8876 34 Mapoly0040s0096 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [K02717] photosystem II oxygen-evolving enhancer protein 2; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis 42.52 0.8892 35 Mapoly0024s0090 [PF00089] Trypsin; [PTHR22939] SERINE PROTEASE FAMILY S1C HTRA-RELATED; [GO:0005515] protein binding; [PF13180] PDZ domain; [KOG1320] Serine protease; [GO:0004252] serine-type endopeptidase activity; [GO:0006508] proteolysis 45.17 0.8732 36 Mapoly0052s0039 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [K08917] light-harvesting complex II chlorophyll a/b binding protein 6; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting 47.49 0.8620 37 Mapoly0056s0110 [PF00581] Rhodanese-like domain 47.74 0.8602 38 Mapoly0008s0037 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding 51.99 0.8535 39 Mapoly0036s0075 [PF00745] Glutamyl-tRNAGlu reductase, dimerisation domain; [GO:0055114] oxidation-reduction process; [PTHR13812] ORNITHINE CYCLODEAMINASE-RELATED; [GO:0008883] glutamyl-tRNA reductase activity; [1.2.1.70] Glutamyl-tRNA reductase.; [K02492] glutamyl-tRNA reductase [EC:1.2.1.70]; [GO:0050661] NADP binding; [PF05201] Glutamyl-tRNAGlu reductase, N-terminal domain; [GO:0033014] tetrapyrrole biosynthetic process; [PF01488] Shikimate / quinate 5-dehydrogenase 52.31 0.8562 40 Mapoly0068s0047 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [K08914] light-harvesting complex II chlorophyll a/b binding protein 3; [GO:0009765] photosynthesis, light harvesting 55.23 0.8493 41 Mapoly0016s0090 - 56.28 0.8599 42 Mapoly0013s0204 [GO:0005840] ribosome; [PTHR14413] RIBOSOMAL PROTEIN L17; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01196] Ribosomal protein L17; [KOG3280] Mitochondrial/chloroplast ribosomal protein L17; [K02879] large subunit ribosomal protein L17; [GO:0006412] translation 58.21 0.8721 43 Mapoly0135s0007 - 58.31 0.8546 44 Mapoly0030s0051 [GO:0016020] membrane; [PF01758] Sodium Bile acid symporter family; [GO:0008508] bile acid:sodium symporter activity; [GO:0006814] sodium ion transport; [K03453] bile acid:Na+ symporter, BASS family; [KOG2718] Na+-bile acid cotransporter; [PTHR10361] SODIUM-BILE ACID COTRANSPORTER 58.51 0.7849 45 Mapoly0136s0029 [PTHR32183] FAMILY NOT NAMED 58.57 0.8556 46 Mapoly0068s0079 [PTHR14003:SF1] YY1-RELATED; [PF13465] Zinc-finger double domain; [PTHR14003] TRANSCRIPTIONAL REPRESSOR PROTEIN YY 59.19 0.8425 47 Mapoly0088s0012 - 59.45 0.8644 48 Mapoly0031s0030 [PF02575] YbaB/EbfC DNA-binding family 60.62 0.8412 49 Mapoly0178s0020 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 62.33 0.8205 50 Mapoly0096s0034 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [GO:0005524] ATP binding; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [PTHR11451:SF5] THREONYL-TRNA SYNTHETASE; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF07973] Threonyl and Alanyl tRNA synthetase second additional domain; [K01868] threonyl-tRNA synthetase [EC:6.1.1.3]; [PTHR11451] TRNA SYNTHETASE-RELATED; [6.1.1.3] Threonine--tRNA ligase.; [PF03129] Anticodon binding domain; [KOG1637] Threonyl-tRNA synthetase; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity 63.17 0.8438