Guide Gene

Gene ID
Mapoly0133s0024
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K12871] coiled-coil domain-containing protein 12; [KOG3407] Uncharacterized conserved protein; [PF08315] cwf18 pre-mRNA splicing factor; [PTHR31551] FAMILY NOT NAMED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0133s0024 [K12871] coiled-coil domain-containing protein 12; [KOG3407] Uncharacterized conserved protein; [PF08315] cwf18 pre-mRNA splicing factor; [PTHR31551] FAMILY NOT NAMED 0.00 1.0000
1 Mapoly0071s0007 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [K09494] T-complex protein 1 subunit beta; [KOG0363] Chaperonin complex component, TCP-1 beta subunit (CCT2)3.320.8383
2 Mapoly0083s0001 [GO:0008168] methyltransferase activity; [PF05891] AdoMet dependent proline di-methyltransferase; [PTHR12753] AD-003 - RELATED4.900.7869
3 Mapoly0038s0048 [GO:0005737] cytoplasm; [PF08597] Translation initiation factor eIF3 subunit; [GO:0003743] translation initiation factor activity; [K03245] translation initiation factor eIF-3 subunit 1; [PTHR21681] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 1; [GO:0005852] eukaryotic translation initiation factor 3 complex; [KOG4813] Translation initiation factor eIF3, p35 subunit6.710.7584
4 Mapoly0047s0069 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0358] Chaperonin complex component, TCP-1 delta subunit (CCT4)6.780.8154
5 Mapoly0002s0007 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [GO:0009451] RNA modification; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase; [PTHR21600] RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B; [PF01479] S4 domain9.800.7423
6 Mapoly0982s0001 [PF03143] Elongation factor Tu C-terminal domain; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding10.580.7194
7 Mapoly0023s0062 [K11086] small nuclear ribonucleoprotein B and B'; [PTHR10701] SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N; [KOG3168] U1 snRNP component; [PF01423] LSM domain10.950.7850
8 Mapoly0014s0101 [PTHR23105:SF5] 50S RIBOSOMAL PROTEIN L1P; [PF00687] Ribosomal protein L1p/L10e family; [KOG1685] Uncharacterized conserved protein; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER12.250.7529
9 Mapoly0003s0247 [K12845] U4/U6 small nuclear ribonucleoprotein SNU13; [KOG3387] 60S ribosomal protein 15.5kD/SNU13, NHP2/L7A family (includes ribonuclease P subunit p38), involved in splicing; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family12.730.7816
10 Mapoly0005s0006 [GO:0003723] RNA binding; [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [KOG1670] Translation initiation factor 4F, cap-binding subunit (eIF-4E) and related cap-binding proteins; [K03259] translation initiation factor eIF-4E; [PF01652] Eukaryotic initiation factor 4E; [GO:0006413] translational initiation; [PTHR11960] EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED16.970.7597
11 Mapoly0005s0217 [KOG3428] Small nuclear ribonucleoprotein SMD1 and related snRNPs; [K11087] small nuclear ribonucleoprotein D1; [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain19.390.7854
12 Mapoly0052s0054 [KOG0362] Chaperonin complex component, TCP-1 theta subunit (CCT8); [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family19.440.7399
13 Mapoly0052s0053 [PTHR11038] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10; [GO:0045039] protein import into mitochondrial inner membrane; [PF02953] Tim10/DDP family zinc finger; [KOG3480] Mitochondrial import inner membrane translocase, subunits TIM10/TIM1219.970.7778
14 Mapoly0083s0034 -25.480.7475
15 Mapoly0054s0063 [PTHR24012] FAMILY NOT NAMED; [KOG0107] Alternative splicing factor SRp20/9G8 (RRM superfamily); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)25.920.7013
16 Mapoly0043s0090 [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [6.1.1.22] Asparagine--tRNA ligase.; [KOG0554] Asparaginyl-tRNA synthetase (mitochondrial); [K01893] asparaginyl-tRNA synthetase [EC:6.1.1.22]; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)26.550.7385
17 Mapoly0005s0125 [PF05383] La domain; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PF08777] RNA binding motif; [K11090] lupus La protein; [KOG4213] RNA-binding protein La; [PTHR22792] LUPUS LA PROTEIN-RELATED27.220.7422
18 Mapoly0004s0058 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR13215:SF4] SUBFAMILY NOT NAMED; [PF08766] DEK C terminal domain; [PF02229] Transcriptional Coactivator p15 (PC4); [KOG2712] Transcriptional coactivator; [PTHR13215] RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR; [GO:0003713] transcription coactivator activity28.980.7283
19 Mapoly0056s0020 [PF04548] AIG1 family; [PTHR10903] GTPASE, IMAP FAMILY MEMBER-RELATED; [GO:0005525] GTP binding29.930.7369
20 Mapoly0134s0022 [PF01926] 50S ribosome-binding GTPase; [KOG1491] Predicted GTP-binding protein (ODN superfamily); [PF06071] Protein of unknown function (DUF933); [K06942] ribosomal RNA large subunit methyltransferase N [EC:2.1.1.-]; [PTHR23305] GTP-BINDING PROTEIN-RELATED; [GO:0005525] GTP binding30.000.7313
21 Mapoly0917s0001 -30.100.5482
22 Mapoly0051s0088 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0357] Chaperonin complex component, TCP-1 epsilon subunit (CCT5)30.890.7339
23 Mapoly0031s0028 -32.500.7125
24 Mapoly0057s0039 [PTHR12409] PREFOLDIN SUBUNIT 3; [GO:0016272] prefoldin complex; [PF02996] Prefoldin subunit; [KOG3313] Molecular chaperone Prefoldin, subunit 3; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding33.940.7250
25 Mapoly0051s0054 -35.230.7368
26 Mapoly0009s0066 [GO:0005515] protein binding; [KOG2699] Predicted ubiquitin regulatory protein; [PF09409] PUB domain; [PF00627] UBA/TS-N domain; [PTHR13020] UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAINING36.330.6799
27 Mapoly0009s0121 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [KOG0364] Chaperonin complex component, TCP-1 gamma subunit (CCT3); [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding37.230.7277
28 Mapoly0012s0108 [K03123] transcription initiation factor TFIIA small subunit; [PF02751] Transcription initiation factor IIA, gamma subunit; [PTHR10966] TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2; [KOG3463] Transcription initiation factor IIA, gamma subunit; [GO:0005672] transcription factor TFIIA complex; [GO:0006367] transcription initiation from RNA polymerase II promoter; [PF02268] Transcription initiation factor IIA, gamma subunit, helical domain39.500.7232
29 Mapoly0084s0020 [PTHR21686:SF12] SUBFAMILY NOT NAMED; [PF08698] Fcf2 pre-rRNA processing; [PTHR21686] UNCHARACTERIZED39.820.6290
30 Mapoly0084s0048 [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [KOG0552] FKBP-type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [K01802] peptidylprolyl isomerase [EC:5.2.1.8]; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [5.2.1.8] Peptidylprolyl isomerase.; [PF03066] Nucleoplasmin41.010.7184
31 Mapoly0014s0080 [PF03587] EMG1/NEP1 methyltransferase; [GO:0008168] methyltransferase activity; [PTHR12636:SF5] SUBFAMILY NOT NAMED; [KOG3073] Protein required for 18S rRNA maturation and 40S ribosome biogenesis; [K14568] essential for mitotic growth 1; [PTHR12636] NEP1/MRA141.180.7126
32 Mapoly0036s0012 [GO:0003723] RNA binding; [KOG3013] Exosomal 3'-5' exoribonuclease complex, subunit Rrp4; [PTHR21321] PNAS-3 RELATED; [PTHR21321:SF1] PNAS-3 RELATED; [K03679] exosome complex component RRP4; [GO:0000178] exosome (RNase complex)45.730.6289
33 Mapoly0179s0014 [PTHR11586:SF1] SUBFAMILY NOT NAMED; [KOG2241] tRNA-binding protein; [PF01588] Putative tRNA binding domain; [GO:0000049] tRNA binding; [PTHR11586] FAMILY NOT NAMED49.170.7135
34 Mapoly0007s0156 [PTHR31745] FAMILY NOT NAMED; [PF08536] Whirly transcription factor49.900.7136
35 Mapoly0060s0048 [GO:0003743] translation initiation factor activity; [PF01253] Translation initiation factor SUI1; [GO:0006413] translational initiation; [PTHR12789] DENSITY-REGULATED PROTEIN HOMOLOG; [KOG3239] Density-regulated protein related to translation initiation factor 1 (eIF-1/SUI1)55.010.7121
36 Mapoly0027s0144 [GO:0016272] prefoldin complex; [KOG3501] Molecular chaperone Prefoldin, subunit 1; [PTHR20903] PREFOLDIN SUBUNIT 1-RELATED; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding; [PF01920] Prefoldin subunit55.230.7249
37 Mapoly0139s0003 [PF11523] Protein of unknown function (DUF3223)57.660.7095
38 Mapoly0005s0203 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PF00313] 'Cold-shock' DNA-binding domain; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [PTHR11544] COLD SHOCK DOMAIN CONTAINING PROTEINS; [K09250] cellular nucleic acid-binding protein; [GO:0003676] nucleic acid binding; [KOG3070] Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing57.750.7261
39 Mapoly0132s0028 [GO:0006260] DNA replication; [PTHR10302] SINGLE-STRANDED DNA-BINDING PROTEIN; [GO:0003697] single-stranded DNA binding; [KOG1653] Single-stranded DNA-binding protein; [PF00436] Single-strand binding protein family; [K03111] single-strand DNA-binding protein58.800.7035
40 Mapoly0007s0163 [PTHR22055] 28 KDA HEAT- AND ACID-STABLE PHOSPHOPROTEIN (PDGF-ASSOCIATED PROTEIN); [PF10252] Casein kinase substrate phosphoprotein PP28; [KOG3375] Phosphoprotein/predicted coiled-coil protein61.490.7325
41 Mapoly0048s0048 [PTHR31802] FAMILY NOT NAMED62.570.7197
42 Mapoly0152s0024 [PTHR21026:SF2] gb def: Putative 39S ribosomal protein L32, mitochondrial precursor; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR21026] 39S RIBOSOMAL PROTEIN L32, MITOCHONDRIAL; [GO:0006412] translation; [PF01783] Ribosomal L32p protein family65.000.6735
43 Mapoly0044s0136 [PF12171] Zinc-finger double-stranded RNA-binding; [K13104] zinc finger protein 830; [PTHR13278] UNCHARACTERIZED; [KOG3032] Uncharacterized conserved protein65.880.6280
44 Mapoly0003s0204 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PTHR24031:SF0] SUBFAMILY NOT NAMED; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding66.330.6451
45 Mapoly0014s0105 -68.370.7023
46 Mapoly0072s0034 [K12178] COP9 signalosome complex subunit 4; [GO:0005515] protein binding; [KOG1497] COP9 signalosome, subunit CSN4; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4; [PTHR10855:SF2] COP9 SIGNALOSOME COMPLEX SUBUNIT 470.410.6631
47 Mapoly0001s0201 [GO:0005840] ribosome; [KOG3449] 60S acidic ribosomal protein P2; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0003735] structural constituent of ribosome; [K02943] large subunit ribosomal protein LP2; [GO:0005622] intracellular; [PF00428] 60s Acidic ribosomal protein72.100.6967
48 Mapoly0015s0123 [GO:0003723] RNA binding; [PF07541] Eukaryotic translation initiation factor 2 alpha subunit; [GO:0005850] eukaryotic translation initiation factor 2 complex; [PTHR10602] EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1; [K03237] translation initiation factor eIF-2 alpha subunit; [GO:0003743] translation initiation factor activity; [PTHR10602:SF0] EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1; [PF00575] S1 RNA binding domain; [KOG2916] Translation initiation factor 2, alpha subunit (eIF-2alpha)72.420.6856
49 Mapoly0014s0176 -75.890.6477
50 Mapoly0108s0031 [GO:0005524] ATP binding; [K04499] RuvB-like protein 1 (pontin 52); [KOG1942] DNA helicase, TBP-interacting protein; [PF06068] TIP49 C-terminus; [GO:0043141] ATP-dependent 5'-3' DNA helicase activity; [GO:0003678] DNA helicase activity; [PTHR11093] RUVB-RELATED REPTIN AND PONTIN77.180.7072
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