Guide Gene

Gene ID
Mapoly0007s0156
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR31745] FAMILY NOT NAMED; [PF08536] Whirly transcription factor

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0007s0156 [PTHR31745] FAMILY NOT NAMED; [PF08536] Whirly transcription factor 0.00 1.0000
1 Mapoly0026s0057 [PTHR23417] 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE; [PF02390] Putative methyltransferase; [GO:0008176] tRNA (guanine-N7-)-methyltransferase activity; [K03439] tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]; [2.1.1.33] tRNA (guanine(46)-N(7))-methyltransferase.; [KOG3115] Methyltransferase-like protein; [GO:0006400] tRNA modification2.450.8129
2 Mapoly0083s0082 [PTHR15840] CGI-121 FAMILY MEMBER; [KOG4066] Cell growth regulatory protein CGR11; [PF08617] Kinase binding protein CGI-1212.450.8497
3 Mapoly0048s0048 [PTHR31802] FAMILY NOT NAMED3.460.8490
4 Mapoly0179s0014 [PTHR11586:SF1] SUBFAMILY NOT NAMED; [KOG2241] tRNA-binding protein; [PF01588] Putative tRNA binding domain; [GO:0000049] tRNA binding; [PTHR11586] FAMILY NOT NAMED5.920.8267
5 Mapoly0014s0105 -6.000.8344
6 Mapoly0133s0052 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [K08851] TP53 regulating kinase [EC:2.7.11.1]; [PTHR12209] O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; [GO:0006468] protein phosphorylation; [KOG3087] Serine/threonine protein kinase; [GO:0004674] protein serine/threonine kinase activity6.480.8368
7 Mapoly0123s0035 [PTHR14614] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN; [PF10294] Putative methyltransferase; [KOG3201] Uncharacterized conserved protein8.310.7212
8 Mapoly0066s0106 [PTHR15588] LSM1; [KOG1784] Small Nuclear ribonucleoprotein splicing factor; [K12627] U6 snRNA-associated Sm-like protein LSm8; [PF01423] LSM domain8.370.8087
9 Mapoly0001s0053 -8.940.7812
10 Mapoly0091s0083 [GO:0003723] RNA binding; [PTHR13452:SF6] TRNA ACETYLTRANSFERASE TAN1; [PTHR13452] THUMP DOMAIN CONTAINING PROTEIN 1-RELATED; [PF02926] THUMP domain; [K06963] ribosomal RNA assembly protein9.220.7808
11 Mapoly0051s0054 -11.620.8062
12 Mapoly0005s0125 [PF05383] La domain; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PF08777] RNA binding motif; [K11090] lupus La protein; [KOG4213] RNA-binding protein La; [PTHR22792] LUPUS LA PROTEIN-RELATED12.650.8051
13 Mapoly0024s0061 [KOG1508] DNA replication factor/protein phosphatase inhibitor SET/SPR-2; [PF00956] Nucleosome assembly protein (NAP); [GO:0005634] nucleus; [GO:0006334] nucleosome assembly; [K11290] template-activating factor I; [PTHR11875] TESTIS-SPECIFIC Y-ENCODED PROTEIN16.000.8087
14 Mapoly0003s0247 [K12845] U4/U6 small nuclear ribonucleoprotein SNU13; [KOG3387] 60S ribosomal protein 15.5kD/SNU13, NHP2/L7A family (includes ribonuclease P subunit p38), involved in splicing; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER; [PF01248] Ribosomal protein L7Ae/L30e/S12e/Gadd45 family18.030.7854
15 Mapoly0001s0392 [KOG0121] Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily); [GO:0000339] RNA cap binding; [GO:0045292] mRNA cis splicing, via spliceosome; [K12883] nuclear cap-binding protein subunit 2; [GO:0003676] nucleic acid binding; [GO:0005846] nuclear cap binding complex; [PTHR18847] 20 KD NUCLEAR CAP BINDING PROTEIN; [PTHR18847:SF0] SUBFAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)18.330.7620
16 Mapoly0097s0065 [PTHR15350:SF2] COP9 SIGNALOSOME COMPLEX SUBUNIT 7; [GO:0005515] protein binding; [PF01399] PCI domain; [PTHR15350] COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17; [KOG2753] Uncharacterized conserved protein, contains PCI domain19.600.7937
17 Mapoly0037s0133 -23.240.7320
18 Mapoly0009s0086 [PTHR10741:SF4] PUTATIVE UNCHARACTERIZED PROTEIN ORF-C08_005 (PUTATIVE UNCHARACTERIZED PROTEIN); [PTHR10741] TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X; [GO:0043565] sequence-specific DNA binding; [KOG3066] Translin-associated protein X; [PF01997] Translin family23.320.7222
19 Mapoly0145s0029 -23.870.7713
20 Mapoly0084s0048 [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [KOG0552] FKBP-type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [K01802] peptidylprolyl isomerase [EC:5.2.1.8]; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [5.2.1.8] Peptidylprolyl isomerase.; [PF03066] Nucleoplasmin24.450.7682
21 Mapoly0114s0041 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [KOG0879] U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [5.2.1.8] Peptidylprolyl isomerase.; [K09567] peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]; [PTHR11071:SF58] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H, PPIH24.490.7462
22 Mapoly0013s0016 [GO:0003677] DNA binding; [GO:0006260] DNA replication; [PTHR31614] FAMILY NOT NAMED; [GO:0005634] nucleus; [GO:0006281] DNA repair; [PF08661] Replication factor A protein 3; [GO:0006310] DNA recombination25.380.7853
23 Mapoly0139s0008 [PF14929] TAF RNA Polymerase I subunit A25.420.7496
24 Mapoly0031s0028 -25.650.7412
25 Mapoly0166s0018 [K10739] replication factor A2; [KOG3108] Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit; [PF08784] Replication protein A C terminal; [PTHR13989] REPLICATION PROTEIN A-RELATED; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain29.850.8017
26 Mapoly0009s0045 [PTHR10741] TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X; [GO:0043565] sequence-specific DNA binding; [KOG3067] Translin family protein; [PF01997] Translin family; [PTHR10741:SF2] TRANSLIN30.170.7512
27 Mapoly0012s0108 [K03123] transcription initiation factor TFIIA small subunit; [PF02751] Transcription initiation factor IIA, gamma subunit; [PTHR10966] TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2; [KOG3463] Transcription initiation factor IIA, gamma subunit; [GO:0005672] transcription factor TFIIA complex; [GO:0006367] transcription initiation from RNA polymerase II promoter; [PF02268] Transcription initiation factor IIA, gamma subunit, helical domain30.460.7589
28 Mapoly0008s0078 [PF03966] Trm112p-like protein; [PTHR12773] UPF0315 PROTEIN-RELATED31.980.7544
29 Mapoly0092s0049 [PTHR10501] U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B; [K11094] U2 small nuclear ribonucleoprotein B''; [GO:0000398] mRNA splicing, via spliceosome; [KOG4206] Spliceosomal protein snRNP-U1A/U2B; [GO:0003676] nucleic acid binding; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [GO:0017069] snRNA binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)33.410.7758
30 Mapoly0004s0058 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR13215:SF4] SUBFAMILY NOT NAMED; [PF08766] DEK C terminal domain; [PF02229] Transcriptional Coactivator p15 (PC4); [KOG2712] Transcriptional coactivator; [PTHR13215] RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR; [GO:0003713] transcription coactivator activity34.210.7435
31 Mapoly0007s0163 [PTHR22055] 28 KDA HEAT- AND ACID-STABLE PHOSPHOPROTEIN (PDGF-ASSOCIATED PROTEIN); [PF10252] Casein kinase substrate phosphoprotein PP28; [KOG3375] Phosphoprotein/predicted coiled-coil protein35.710.7847
32 Mapoly0056s0020 [PF04548] AIG1 family; [PTHR10903] GTPASE, IMAP FAMILY MEMBER-RELATED; [GO:0005525] GTP binding36.000.7507
33 Mapoly0044s0136 [PF12171] Zinc-finger double-stranded RNA-binding; [K13104] zinc finger protein 830; [PTHR13278] UNCHARACTERIZED; [KOG3032] Uncharacterized conserved protein37.830.6727
34 Mapoly0006s0190 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG3436] 60S ribosomal protein L35; [PTHR13872] 60S RIBOSOMAL PROTEIN L35; [GO:0005622] intracellular; [PF00831] Ribosomal L29 protein; [GO:0006412] translation; [K02918] large subunit ribosomal protein L35e37.950.7704
35 Mapoly0024s0037 [K13151] snurportin-1; [KOG3132] m3G-cap-specific nuclear import receptor (Snurportin1); [PTHR13403:SF6] SNURPORTIN1 (RNUT1 PROTEIN) (RNA, U TRANSPORTER 1); [PTHR13403] SNURPORTIN1 (RNUT1 PROTEIN) (RNA, U TRANSPORTER 1)37.950.6722
36 Mapoly0028s0114 [K14565] nucleolar protein 58; [PF01798] Putative snoRNA binding domain; [PF08060] NOSIC (NUC001) domain; [PTHR10894:SF1] NUCLEOLAR PROTEIN NOP56-RELATED; [PF08156] NOP5NT (NUC127) domain; [KOG2572] Ribosome biogenesis protein - Nop58p/Nop5p; [PTHR10894] NUCLEOLAR PROTEIN 5 (NUCLEOLAR PROTEIN NOP5)(NOP58)38.170.7576
37 Mapoly0086s0024 [GO:0001522] pseudouridine synthesis; [GO:0031429] box H/ACA snoRNP complex; [GO:0042254] ribosome biogenesis; [K11128] H/ACA ribonucleoprotein complex subunit 1; [KOG3262] H/ACA small nucleolar RNP component GAR1; [PF04410] Gar1/Naf1 RNA binding region; [PTHR23237] NUCLEOLAR PROTEIN FAMILY A MEMBER 1 (SNORNP PROTEIN GAR1)38.520.7354
38 Mapoly0036s0004 [GO:0034477] U6 snRNA 3'-end processing; [PTHR13522] UNCHARACTERIZED; [KOG3102] Uncharacterized conserved protein; [GO:0004518] nuclease activity; [PF09749] Uncharacterised conserved protein40.120.6379
39 Mapoly0037s0122 [PTHR12777] SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2; [KOG3459] Small nuclear ribonucleoprotein (snRNP) Sm core protein; [GO:0030532] small nuclear ribonucleoprotein complex; [K11096] small nuclear ribonucleoprotein D2; [PF01423] LSM domain; [GO:0008380] RNA splicing42.470.7684
40 Mapoly0146s0045 [GO:0003723] RNA binding; [PTHR11207:SF1] RIBONUCLEASE III; [PF00035] Double-stranded RNA binding motif; [GO:0004525] ribonuclease III activity; [GO:0016075] rRNA catabolic process; [PTHR11207] RIBONUCLEASE III43.300.7679
41 Mapoly0001s0266 [GO:0003677] DNA binding; [PF01192] RNA polymerase Rpb6; [KOG3405] RNA polymerase subunit K; [PTHR10773] DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [K03014] DNA-directed RNA polymerases I, II, and III subunit RPABC243.860.7637
42 Mapoly0014s0106 [KOG3172] Small nuclear ribonucleoprotein Sm D3; [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain44.670.7702
43 Mapoly0071s0007 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [K09494] T-complex protein 1 subunit beta; [KOG0363] Chaperonin complex component, TCP-1 beta subunit (CCT2)47.120.7577
44 Mapoly0036s0154 [KOG2606] OTU (ovarian tumor)-like cysteine protease; [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PTHR12419:SF10] gb def: ENSANGP00000019868 (Fragment); [PF02338] OTU-like cysteine protease47.910.7621
45 Mapoly0133s0024 [K12871] coiled-coil domain-containing protein 12; [KOG3407] Uncharacterized conserved protein; [PF08315] cwf18 pre-mRNA splicing factor; [PTHR31551] FAMILY NOT NAMED49.900.7136
46 Mapoly0014s0176 -52.380.7045
47 Mapoly0005s0217 [KOG3428] Small nuclear ribonucleoprotein SMD1 and related snRNPs; [K11087] small nuclear ribonucleoprotein D1; [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain53.440.7679
48 Mapoly0109s0054 [GO:0003677] DNA binding; [GO:0006355] regulation of transcription, DNA-dependent; [PF02229] Transcriptional Coactivator p15 (PC4); [KOG2712] Transcriptional coactivator; [PTHR13215] RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR; [GO:0003713] transcription coactivator activity54.260.7572
49 Mapoly0014s0064 [PTHR10552] U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A; [K11092] U2 small nuclear ribonucleoprotein A'; [KOG1644] U2-associated snRNP A' protein; [PF14580] Leucine-rich repeat55.510.7474
50 Mapoly0028s0032 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [K12733] peptidyl-prolyl cis-trans isomerase-like 1 [EC:5.2.1.8]; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [5.2.1.8] Peptidylprolyl isomerase.; [KOG0881] Cyclophilin type peptidyl-prolyl cis-trans isomerase55.560.7252
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