Guide Gene

Gene ID
Mapoly0084s0020
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR21686:SF12] SUBFAMILY NOT NAMED; [PF08698] Fcf2 pre-rRNA processing; [PTHR21686] UNCHARACTERIZED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0084s0020 [PTHR21686:SF12] SUBFAMILY NOT NAMED; [PF08698] Fcf2 pre-rRNA processing; [PTHR21686] UNCHARACTERIZED 0.00 1.0000
1 Mapoly0009s0068 [PTHR15371] TIM23; [PTHR15371:SF0] SUBFAMILY NOT NAMED; [KOG3324] Mitochondrial import inner membrane translocase, subunit TIM23; [PF02466] Tim17/Tim22/Tim23/Pmp24 family2.240.6612
2 Mapoly0003s0064 [GO:0005759] mitochondrial matrix; [KOG2536] MAM33, mitochondrial matrix glycoprotein; [PF02330] Mitochondrial glycoprotein4.120.6104
3 Mapoly0002s0206 [PF10213] Mitochondrial ribosomal subunit protein; [PTHR13490] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S289.800.6609
4 Mapoly0005s0148 [PTHR21250:SF0] SUBFAMILY NOT NAMED; [KOG4032] Uncharacterized conserved protein; [PTHR21250] UNCHARACTERIZED; [PF10273] Pre-rRNA-processing protein TSR214.490.5833
5 Mapoly0014s0101 [PTHR23105:SF5] 50S RIBOSOMAL PROTEIN L1P; [PF00687] Ribosomal protein L1p/L10e family; [KOG1685] Uncharacterized conserved protein; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER15.490.6594
6 Mapoly0016s0011 [GO:0005840] ribosome; [PF00468] Ribosomal protein L34; [GO:0003735] structural constituent of ribosome; [PTHR14503] FAMILY NOT NAMED; [GO:0005622] intracellular; [GO:0006412] translation23.490.6500
7 Mapoly0014s0176 -26.270.6340
8 Mapoly0152s0024 [PTHR21026:SF2] gb def: Putative 39S ribosomal protein L32, mitochondrial precursor; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR21026] 39S RIBOSOMAL PROTEIN L32, MITOCHONDRIAL; [GO:0006412] translation; [PF01783] Ribosomal L32p protein family28.120.6431
9 Mapoly0020s0168 [PTHR10898] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9; [KOG3479] Mitochondrial import inner membrane translocase, subunit TIM9; [PF02953] Tim10/DDP family zinc finger29.660.6450
10 Mapoly0036s0147 [KOG4554] Protein involved in inorganic phosphate transport; [PF10032] Phosphate transport (Pho88)34.900.6433
11 Mapoly0031s0028 -36.480.6332
12 Mapoly0072s0021 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN38.880.5952
13 Mapoly0133s0024 [K12871] coiled-coil domain-containing protein 12; [KOG3407] Uncharacterized conserved protein; [PF08315] cwf18 pre-mRNA splicing factor; [PTHR31551] FAMILY NOT NAMED39.820.6290
14 Mapoly0008s0078 [PF03966] Trm112p-like protein; [PTHR12773] UPF0315 PROTEIN-RELATED43.130.6323
15 Mapoly0051s0054 -43.170.6400
16 Mapoly0072s0005 [GO:0005840] ribosome; [PTHR14413] RIBOSOMAL PROTEIN L17; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01196] Ribosomal protein L17; [KOG3280] Mitochondrial/chloroplast ribosomal protein L17; [K02879] large subunit ribosomal protein L17; [GO:0006412] translation45.480.5929
17 Mapoly0040s0029 [PTHR22840] FAMILY NOT NAMED; [GO:0005515] protein binding; [KOG2444] WD40 repeat protein; [PF00400] WD domain, G-beta repeat46.730.5707
18 Mapoly0014s0080 [PF03587] EMG1/NEP1 methyltransferase; [GO:0008168] methyltransferase activity; [PTHR12636:SF5] SUBFAMILY NOT NAMED; [KOG3073] Protein required for 18S rRNA maturation and 40S ribosome biogenesis; [K14568] essential for mitotic growth 1; [PTHR12636] NEP1/MRA146.880.6258
19 Mapoly0042s0050 [PF05486] Signal recognition particle 9 kDa protein (SRP9); [GO:0048500] signal recognition particle; [GO:0045900] negative regulation of translational elongation; [GO:0008312] 7S RNA binding; [K03109] signal recognition particle subunit SRP9; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PTHR12834] SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN; [KOG3465] Signal recognition particle, subunit Srp953.810.6162
20 Mapoly0052s0053 [PTHR11038] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10; [GO:0045039] protein import into mitochondrial inner membrane; [PF02953] Tim10/DDP family zinc finger; [KOG3480] Mitochondrial import inner membrane translocase, subunits TIM10/TIM1254.000.6385
21 Mapoly0027s0008 [GO:0005515] protein binding; [KOG0280] Uncharacterized conserved protein; [PTHR22850] WD40 REPEAT FAMILY; [PF00400] WD domain, G-beta repeat57.970.5691
22 Mapoly0077s0061 -59.600.5633
23 Mapoly0090s0044 [PTHR13362] MITOCHONDRIAL RIBOSOMAL PROTEIN S33; [KOG4844] Mitochondrial ribosomal protein S27; [PF08293] Mitochondrial ribosomal subunit S2760.450.5833
24 Mapoly0024s0024 -61.260.5870
25 Mapoly0207s0011 [KOG0114] Predicted RNA-binding protein (RRM superfamily); [PTHR22630:SF0] SUBFAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K12833] pre-mRNA branch site protein p14; [PTHR22630] PRE-MRNA BRANCH SITE PROTEIN; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)66.540.5995
26 Mapoly0014s0105 -69.930.6205
27 Mapoly0013s0132 [PF04117] Mpv17 / PMP22 family; [GO:0016021] integral to membrane; [PTHR11266:SF7] 22 KDA PEROXISOMAL MEMBRANE PROTEIN; [PTHR11266] PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 (MPV17); [KOG1944] Peroxisomal membrane protein MPV17 and related proteins76.990.5441
28 Mapoly0108s0062 [K03016] DNA-directed RNA polymerases I, II, and III subunit RPABC3; [PTHR10917:SF0] DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3; [PTHR10917] DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3; [PF03870] RNA polymerase Rpb8; [KOG3400] RNA polymerase subunit 8; [GO:0006351] transcription, DNA-dependent77.140.5798
29 Mapoly0158s0008 [PTHR24322] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PTHR24322:SF57] SUBFAMILY NOT NAMED; [PF00106] short chain dehydrogenase; [KOG1611] Predicted short chain-type dehydrogenase77.150.5512
30 Mapoly0059s0035 -82.220.5703
31 Mapoly0009s0030 [PF06984] Mitochondrial 39-S ribosomal protein L47 (MRP-L47); [GO:0005761] mitochondrial ribosome; [GO:0003735] structural constituent of ribosome; [PTHR21183] RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATED; [GO:0006412] translation82.700.6088
32 Mapoly0061s0117 -82.920.5757
33 Mapoly0005s0032 [PF08561] Mitochondrial ribosomal protein L37; [KOG3435] Mitochondrial/chloroplast ribosomal protein L54/L3783.240.5700
34 Mapoly0015s0017 [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [GO:0042254] ribosome biogenesis; [GO:0005622] intracellular; [PF00466] Ribosomal protein L10; [KOG0816] Protein involved in mRNA turnover83.280.5895
35 Mapoly0006s0175 [PF13233] Complex1_LYR-like85.440.5894
36 Mapoly0078s0046 [GO:0015035] protein disulfide oxidoreductase activity; [KOG1752] Glutaredoxin and related proteins; [PTHR10168] GLUTAREDOXIN; [GO:0045454] cell redox homeostasis; [PF00462] Glutaredoxin; [GO:0009055] electron carrier activity; [K03676] glutaredoxin 386.630.5488
37 Mapoly0007s0196 [KOG4655] U3 small nucleolar ribonucleoprotein (snoRNP) component; [GO:0003723] RNA binding; [PTHR11831:SF1] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K14560] U3 small nucleolar ribonucleoprotein protein IMP3; [PF01479] S4 domain87.580.5889
38 Mapoly0061s0136 [PTHR11807] ATPASES OF THE PP SUPERFAMILY-RELATED; [PF01171] PP-loop family88.990.5324
39 Mapoly0005s0017 [PTHR10772] 10 KDA HEAT SHOCK PROTEIN; [KOG1641] Mitochondrial chaperonin; [GO:0005737] cytoplasm; [PF00166] Chaperonin 10 Kd subunit; [GO:0006457] protein folding; [K04078] chaperonin GroES94.760.5985
40 Mapoly0075s0082 -96.690.5374
41 Mapoly0068s0081 [KOG1692] Putative cargo transport protein EMP24 (p24 protein family); [GO:0016021] integral to membrane; [GO:0006810] transport; [PF01105] emp24/gp25L/p24 family/GOLD; [PTHR22811] TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN97.490.5664
42 Mapoly0008s0082 [PTHR15069] FAMILY NOT NAMED98.350.5306
43 Mapoly0002s0343 [KOG3448] Predicted snRNP core protein; [GO:0006397] mRNA processing; [PTHR13829] SNRNP CORE PROTEIN FAMILY MEMBER; [K12621] U6 snRNA-associated Sm-like protein LSm2; [PF01423] LSM domain99.100.5006
44 Mapoly0098s0050 [KOG3031] Protein required for biogenesis of the ribosomal 60S subunit; [PTHR12728] BRIX DOMAIN CONTAINING PROTEIN; [PTHR12728:SF0] SUBFAMILY NOT NAMED; [PF04427] Brix domain99.420.5865
45 Mapoly0917s0001 -100.220.4534
46 Mapoly0054s0132 [GO:0003677] DNA binding; [K03007] DNA-directed RNA polymerases I, II, and III subunit RPABC5; [PF01194] RNA polymerases N / 8 kDa subunit; [GO:0006351] transcription, DNA-dependent; [KOG3497] DNA-directed RNA polymerase, subunit RPB10; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR23413] 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N103.880.5808
47 Mapoly0063s0083 [KOG3492] Ribosome biogenesis protein NIP7; [K07565] 60S ribosome subunit biogenesis protein NIP7; [PF03657] Uncharacterised protein family (UPF0113); [PTHR23415:SF4] 60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7; [PTHR23415] CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7105.660.5798
48 Mapoly0014s0002 -106.160.5923
49 Mapoly0084s0082 [KOG2524] Cobyrinic acid a,c-diamide synthase; [PTHR21314:SF0] SUBFAMILY NOT NAMED; [PTHR21314] UNCHARACTERIZED; [PF10343] Protein of unknown function (DUF2419)106.640.4740
50 Mapoly0068s0046 [KOG3416] Predicted nucleic acid binding protein; [PTHR13356] OB FOLD NUCLEIC ACID BINDING PROTEIN-RELATED108.220.5505
Showing 1 to 50 of 200 records
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