Guide Gene
- Gene ID
- Mapoly0061s0115
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PTHR23079] RNA-DEPENDENT RNA POLYMERASE; [GO:0003968] RNA-directed RNA polymerase activity; [PTHR23079:SF1] RNA-DEPENDENT RNA POLYMERASE; [KOG0988] RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference; [PF05183] RNA dependent RNA polymerase
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0061s0115 [PTHR23079] RNA-DEPENDENT RNA POLYMERASE; [GO:0003968] RNA-directed RNA polymerase activity; [PTHR23079:SF1] RNA-DEPENDENT RNA POLYMERASE; [KOG0988] RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference; [PF05183] RNA dependent RNA polymerase 0.00 1.0000 1 Mapoly0112s0020 - 1.00 0.7245 2 Mapoly0143s0016 - 4.24 0.7206 3 Mapoly0067s0030 [KOG0254] Predicted transporter (major facilitator superfamily); [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [PTHR24063:SF148] PUTATIVE UNCHARACTERIZED PROTEIN; [GO:0055085] transmembrane transport; [GO:0022857] transmembrane transporter activity; [PTHR24063] FAMILY NOT NAMED 4.47 0.6327 4 Mapoly0019s0126 [PTHR10994] RETICULON; [PF03407] Nucleotide-diphospho-sugar transferase 10.39 0.6567 5 Mapoly0001s0415 [PF05641] Agenet domain 11.40 0.6943 6 Mapoly0049s0078 [KOG4317] Predicted Zn-finger protein; [PTHR15555] ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 (PROTEIN FON)-RELATED; [PTHR15555:SF0] SUBFAMILY NOT NAMED; [PF04438] HIT zinc finger 14.00 0.5564 7 Mapoly0005s0237 - 16.43 0.6626 8 Mapoly0014s0121 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG0390] DNA repair protein, SNF2 family; [PF00271] Helicase conserved C-terminal domain 17.75 0.7061 9 Mapoly0072s0016 [GO:0005515] protein binding; [PTHR15398] BROMODOMAIN-CONTAINING PROTEIN 8; [PF00439] Bromodomain; [K11321] bromodomain-containing protein 8; [PTHR15398:SF0] SUBFAMILY NOT NAMED 18.22 0.6982 10 Mapoly0067s0087 [PF04788] Protein of unknown function (DUF620); [PTHR31300] FAMILY NOT NAMED 18.33 0.6418 11 Mapoly0122s0032 [PF14695] Lines C-terminus 18.73 0.6566 12 Mapoly0043s0131 [PF06465] Domain of Unknown Function (DUF1087) 20.32 0.6779 13 Mapoly0006s0115 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain 20.98 0.6617 14 Mapoly0115s0071 [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00226] DnaJ domain; [PF00515] Tetratricopeptide repeat; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [KOG0550] Molecular chaperone (DnaJ superfamily) 21.91 0.6002 15 Mapoly0031s0063 [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 24.45 0.6228 16 Mapoly0111s0041 - 25.00 0.5392 17 Mapoly0005s0111 [PF13414] TPR repeat; [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR 28.46 0.6782 18 Mapoly0001s0125 - 31.45 0.6288 19 Mapoly0134s0010 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF12726] SEN1 N terminal; [PF13086] AAA domain; [KOG2812] Uncharacterized conserved protein; [PF13087] AAA domain 32.74 0.6734 20 Mapoly0082s0054 [PF10358] N-terminal C2 in EEIG1 and EHBP1 proteins; [PTHR31593] FAMILY NOT NAMED; [PTHR31593:SF0] SUBFAMILY NOT NAMED 34.60 0.6361 21 Mapoly0121s0022 [PTHR31485] FAMILY NOT NAMED 35.51 0.5569 22 Mapoly0002s0219 [PTHR22684] NULP1-RELATED; [PF04910] Transcriptional repressor TCF25; [KOG2422] Uncharacterized conserved protein; [PTHR22684:SF0] SUBFAMILY NOT NAMED 36.00 0.5477 23 Mapoly0152s0016 [KOG1771] GPI-alpha-mannosyltransferase III (GPI10/PIG-B) involved in glycosylphosphatidylinositol anchor biosynthesis; [K05286] phosphatidylinositol glycan, class B [EC:2.4.1.-]; [PF03901] Alg9-like mannosyltransferase family; [PTHR22760] GLYCOSYLTRANSFERASE; [GO:0016757] transferase activity, transferring glycosyl groups; [2.4.1.-] Hexosyltransferases. 37.99 0.5469 24 Mapoly0054s0054 [KOG3276] Uncharacterized conserved protein, contains YggU domain; [PTHR13420:SF1] gb def: y66d12a.8.p [caenorhabditis elegans]; [K09131] hypothetical protein; [PTHR13420] UNCHARACTERIZED; [PF02594] Uncharacterised ACR, YggU family COG1872 41.67 0.5834 25 Mapoly0177s0009 [KOG2641] Predicted seven transmembrane receptor - rhodopsin family; [PTHR23423] ORGANIC SOLUTE TRANSPORTER-RELATED; [PF03619] Organic solute transporter Ostalpha 43.49 0.5837 26 Mapoly0002s0028 [PF00630] Filamin/ABP280 repeat; [GO:0003676] nucleic acid binding; [KOG0146] RNA-binding protein ETR-3 (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 47.53 0.6709 27 Mapoly0030s0147 [GO:0005524] ATP binding; [PF01928] CYTH domain; [KOG3308] Uncharacterized protein of the uridine kinase family; [PF00485] Phosphoribulokinase / Uridine kinase family; [GO:0008152] metabolic process; [GO:0016301] kinase activity; [PTHR10285] URIDINE KINASE 51.96 0.5154 28 Mapoly0001s0195 [GO:0070985] TFIIK complex; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0016538] cyclin-dependent protein serine/threonine kinase regulator activity; [GO:0019901] protein kinase binding; [PTHR10026:SF8] CYCLIN H; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [KOG2496] Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit; [GO:0006351] transcription, DNA-dependent; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity 53.22 0.6271 29 Mapoly0058s0092 - 53.85 0.5854 30 Mapoly0045s0077 [PTHR11807:SF2] CELL CYCLE PROTEIN MESJ; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0000166] nucleotide binding; [PTHR11807] ATPASES OF THE PP SUPERFAMILY-RELATED; [GO:0016879] ligase activity, forming carbon-nitrogen bonds; [PF01171] PP-loop family; [GO:0008033] tRNA processing 54.99 0.6297 31 Mapoly0218s0012 [PTHR15744:SF0] SUBFAMILY NOT NAMED; [PTHR15744] BLOM7 56.38 0.6392 32 Mapoly0012s0196 - 57.71 0.5604 33 Mapoly0080s0093 [GO:0003677] DNA binding; [PF00046] Homeobox domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR12628] POLYCOMB-LIKE TRANSCRIPTION FACTOR 57.84 0.6537 34 Mapoly0143s0017 - 59.58 0.6263 35 Mapoly0007s0174 [KOG1591] Prolyl 4-hydroxylase alpha subunit; [GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PF13640] 2OG-Fe(II) oxygenase superfamily; [GO:0016491] oxidoreductase activity; [PTHR10869] PROLYL 4-HYDROXYLASE ALPHA SUBUNIT; [1.14.11.2] Procollagen-proline dioxygenase.; [K00472] prolyl 4-hydroxylase [EC:1.14.11.2] 63.69 0.5533 36 Mapoly0069s0028 [3.1.27.-] Endoribonucleases producing other than 5'-phosphomonoesters.; [PF07521] RNA-metabolising metallo-beta-lactamase; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [PF11718] Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term; [KOG1137] mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit); [PF00753] Metallo-beta-lactamase superfamily; [K14403] cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]; [PF10996] Beta-Casp domain; [PTHR11203:SF32] UNCHARACTERIZED 66.95 0.6178 37 Mapoly0054s0103 [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [3.6.4.13] RNA helicase.; [KOG0923] mRNA splicing factor ATP-dependent RNA helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold; [K12813] pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13] 69.39 0.6425 38 Mapoly0046s0024 [GO:0005524] ATP binding; [GO:0004386] helicase activity; [PTHR18934] ATP-DEPENDENT RNA HELICASE; [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0008270] zinc ion binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PF04408] Helicase associated domain (HA2); [PF01485] IBR domain; [GO:0003676] nucleic acid binding; [KOG0922] DEAH-box RNA helicase; [PF07717] Oligonucleotide/oligosaccharide-binding (OB)-fold; [GO:0046872] metal ion binding 69.91 0.5151 39 Mapoly0044s0127 [KOG4172] Predicted E3 ubiquitin ligase; [PTHR23041] RING FINGER DOMAIN-CONTAINING; [PF13923] Zinc finger, C3HC4 type (RING finger) 70.10 0.5150 40 Mapoly0084s0085 [PTHR21717] TELOMERIC REPEAT BINDING PROTEIN; [PTHR21717:SF9] TELOMERIC REPEAT BINDING PROTEIN 1 72.47 0.5959 41 Mapoly0101s0047 [KOG2084] Predicted histone tail methylase containing SET domain; [GO:0005515] protein binding; [PF00856] SET domain; [K11426] SET and MYND domain-containing protein; [PTHR12197] SET AND MYND DOMAIN CONTAINING; [PF01753] MYND finger 73.20 0.5451 42 Mapoly0043s0039 [GO:0005524] ATP binding; [PTHR23069] TAT-BINDING HOMOLOG 7; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PF13771] PHD-like zinc-binding domain 75.24 0.6084 43 Mapoly0144s0001 [PF08312] cwf21 domain; [PTHR23140:SF0] SUBFAMILY NOT NAMED; [PTHR23140] RNA PROCESSING PROTEIN LD23810P 77.73 0.5930 44 Mapoly0001s0473 - 78.23 0.6390 45 Mapoly0093s0070 - 80.39 0.4546 46 Mapoly0179s0022 [PTHR10857] COPINE; [PF10539] Development and cell death domain 82.67 0.6108 47 Mapoly0015s0190 - 85.32 0.6157 48 Mapoly0014s0007 [PF12695] Alpha/beta hydrolase family 85.56 0.5416 49 Mapoly0114s0035 [PTHR31169] FAMILY NOT NAMED; [PF10497] Zinc-finger domain of monoamine-oxidase A repressor R1 86.74 0.6296 50 Mapoly0001s0318 [3.4.24.-] Metalloendopeptidases.; [GO:0005524] ATP binding; [GO:0004222] metalloendopeptidase activity; [K03798] cell division protease FtsH [EC:3.4.24.-]; [KOG0731] AAA+-type ATPase containing the peptidase M41 domain; [PF01434] Peptidase family M41; [PTHR23076] METALLOPROTEASE M41 FTSH; [PF00004] ATPase family associated with various cellular activities (AAA); [GO:0006508] proteolysis 87.18 0.5248